PMC:3062687 / 18516-19645
Annnotations
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13936 | 0-5 | P23396 | denotes | NleH1 |
| T13937 | 15-19 | P23396 | denotes | RPS3 |
| T13938 | 149-155 | P23396 | denotes | ΔnleH1 |
| T13939 | 255-261 | P23396 | denotes | ΔnleH1 |
| T13940 | 491-496 | P23396 | denotes | NleH1 |
| T13941 | 505-509 | P23396 | denotes | RPS3 |
| T13942 | 559-563 | P23396 | denotes | RPS3 |
| T13943 | 707-711 | P23396 | denotes | RPS3 |
| T13944 | 845-849 | P23396 | denotes | RPS3 |
| T13945 | 893-899 | P23396 | denotes | ΔnleH1 |
| T13946 | 916-920 | P23396 | denotes | RPS3 |
| T13947 | 994-999 | P23396 | denotes | NleH1 |
| T13948 | 1009-1013 | P23396 | denotes | RPS3 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 21399639-20041225-74765174 | 396-397 | 20041225 | denotes | 9 |
| 21399639-20041225-74765174 | 396-397 | 20041225 | denotes | 9 |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13762 | 0-5 | NN | denotes | NleH1 |
| T13763 | 6-14 | VB | denotes | inhibits |
| T13764 | 15-19 | NN | denotes | RPS3 |
| T13765 | 20-24 | NN | denotes | S209 |
| T13766 | 25-40 | NN | denotes | phosphorylation |
| T13767 | 41-43 | FW | denotes | in |
| T13768 | 44-48 | FW | denotes | vivo |
| T13769 | 49-51 | PRP | denotes | We |
| T13770 | 52-62 | RB | denotes | previously |
| T13771 | 63-71 | VB | denotes | utilized |
| T13772 | 72-73 | DT | denotes | a |
| T13773 | 74-85 | JJ | denotes | gnotobiotic |
| T13774 | 86-92 | NN | denotes | piglet |
| T13775 | 93-102 | NN | denotes | infection |
| T13776 | 103-108 | NN | denotes | model |
| T13777 | 109-111 | TO | denotes | to |
| T13778 | 112-121 | VB | denotes | determine |
| T13779 | 122-126 | IN | denotes | that |
| T13780 | 127-134 | NN | denotes | piglets |
| T13781 | 135-143 | VB | denotes | infected |
| T13782 | 144-148 | IN | denotes | with |
| T13783 | 149-155 | NN | denotes | ΔnleH1 |
| T13784 | 156-162 | NN | denotes | mutant |
| T13785 | 163-167 | VB | denotes | died |
| T13786 | 168-172 | RB | denotes | more |
| T13787 | 173-180 | RB | denotes | rapidly |
| T13788 | 181-185 | IN | denotes | than |
| T13789 | 186-191 | DT | denotes | those |
| T13790 | 192-200 | VB | denotes | infected |
| T13791 | 201-205 | IN | denotes | with |
| T13792 | 206-215 | JJ | denotes | wild-type |
| T13793 | 216-218 | FW | denotes | E. |
| T13794 | 219-223 | FW | denotes | coli |
| T13795 | 224-228 | NN | denotes | O157 |
| T13796 | 228-229 | -COLON- | denotes | : |
| T13797 | 229-231 | NN | denotes | H7 |
| T13798 | 233-240 | NN | denotes | Piglets |
| T13799 | 241-249 | VB | denotes | infected |
| T13800 | 250-254 | IN | denotes | with |
| T13801 | 255-261 | NN | denotes | ΔnleH1 |
| T13802 | 262-271 | VB | denotes | displayed |
| T13803 | 272-280 | JJ | denotes | clinical |
| T13804 | 281-288 | NN | denotes | disease |
| T13805 | 289-299 | JJ | denotes | consistent |
| T13806 | 300-304 | IN | denotes | with |
| T13807 | 305-306 | DT | denotes | a |
| T13808 | 307-313 | JJ | denotes | robust |
| T13809 | 314-326 | JJ | denotes | inflammatory |
| T13810 | 327-335 | NN | denotes | response |
| T13811 | 335-336 | -COMMA- | denotes | , |
| T13812 | 337-340 | CC | denotes | but |
| T13813 | 341-345 | IN | denotes | with |
| T13814 | 346-353 | VB | denotes | reduced |
| T13815 | 354-363 | JJ | denotes | bacterial |
| T13816 | 364-376 | NN | denotes | colonization |
| T13817 | 377-380 | CC | denotes | and |
| T13818 | 381-387 | JJ | denotes | little |
| T13819 | 388-397 | NN | denotes | diarrhea9 |
| T13820 | 399-404 | IN | denotes | While |
| T13821 | 405-414 | RB | denotes | seemingly |
| T13822 | 415-426 | JJ | denotes | paradoxical |
| T13823 | 426-427 | -COMMA- | denotes | , |
| T13824 | 428-433 | VB | denotes | based |
| T13825 | 434-436 | IN | denotes | on |
| T13826 | 437-440 | PRP-DOLLAR- | denotes | our |
| T13827 | 441-445 | NN | denotes | cell |
| T13828 | 446-453 | NN | denotes | culture |
| T13829 | 454-458 | NN | denotes | data |
| T13830 | 459-460 | -LRB- | denotes | ( |
| T13831 | 460-464 | NNP | denotes | Fig. |
| T13832 | 465-467 | NNP | denotes | 6d |
| T13833 | 467-468 | -RRB- | denotes | ) |
| T13834 | 468-469 | -COMMA- | denotes | , |
| T13835 | 470-472 | PRP | denotes | we |
| T13836 | 473-485 | VB | denotes | hypothesized |
| T13837 | 486-490 | IN | denotes | that |
| T13838 | 491-496 | NN | denotes | NleH1 |
| T13839 | 497-504 | VB | denotes | blocked |
| T13840 | 505-509 | NN | denotes | RPS3 |
| T13841 | 510-514 | NN | denotes | S209 |
| T13842 | 515-530 | NN | denotes | phosphorylation |
| T13843 | 531-533 | FW | denotes | in |
| T13844 | 534-538 | FW | denotes | vivo |
| T13845 | 538-539 | -COMMA- | denotes | , |
| T13846 | 540-547 | RB | denotes | thereby |
| T13847 | 548-558 | VB | denotes | preventing |
| T13848 | 559-563 | NN | denotes | RPS3 |
| T13849 | 564-571 | JJ | denotes | nuclear |
| T13850 | 572-585 | NN | denotes | translocation |
| T13851 | 586-588 | IN | denotes | in |
| T13852 | 589-597 | JJ | denotes | infected |
| T13853 | 598-605 | NN | denotes | piglets |
| T13854 | 607-609 | PRP | denotes | We |
| T13855 | 610-618 | VB | denotes | isolated |
| T13856 | 619-625 | NN | denotes | piglet |
| T13857 | 626-632 | NN | denotes | colons |
| T13858 | 633-635 | IN | denotes | at |
| T13859 | 636-644 | NN | denotes | necropsy |
| T13860 | 644-645 | -COMMA- | denotes | , |
| T13861 | 646-649 | CC | denotes | and |
| T13862 | 650-659 | VB | denotes | subjected |
| T13863 | 660-664 | PRP | denotes | them |
| T13864 | 665-667 | TO | denotes | to |
| T13865 | 668-688 | NN | denotes | immunohistochemistry |
| T13866 | 689-694 | VB | denotes | using |
| T13867 | 695-698 | PRP-DOLLAR- | denotes | our |
| T13868 | 699-711 | NN | denotes | phospho-RPS3 |
| T13869 | 712-720 | NN | denotes | antibody |
| T13870 | 722-732 | JJ | denotes | Consistent |
| T13871 | 733-737 | IN | denotes | with |
| T13872 | 738-740 | FW | denotes | in |
| T13873 | 741-746 | FW | denotes | vitro |
| T13874 | 747-751 | NN | denotes | data |
| T13875 | 751-752 | -COMMA- | denotes | , |
| T13876 | 753-760 | NN | denotes | piglets |
| T13877 | 761-769 | VB | denotes | infected |
| T13878 | 770-774 | IN | denotes | with |
| T13879 | 775-784 | JJ | denotes | wild-type |
| T13880 | 785-787 | FW | denotes | E. |
| T13881 | 788-792 | FW | denotes | coli |
| T13882 | 793-797 | NN | denotes | O157 |
| T13883 | 797-798 | -COLON- | denotes | : |
| T13884 | 798-800 | NN | denotes | H7 |
| T13885 | 801-810 | VB | denotes | exhibited |
| T13886 | 811-818 | JJ | denotes | diffuse |
| T13887 | 819-822 | CC | denotes | and |
| T13888 | 823-826 | JJ | denotes | low |
| T13889 | 827-836 | NN | denotes | intensity |
| T13890 | 837-849 | NN | denotes | phospho-RPS3 |
| T13891 | 850-858 | NN | denotes | staining |
| T13892 | 858-859 | -COMMA- | denotes | , |
| T13893 | 860-867 | IN | denotes | whereas |
| T13894 | 868-870 | IN | denotes | in |
| T13895 | 871-878 | NN | denotes | piglets |
| T13896 | 879-887 | VB | denotes | infected |
| T13897 | 888-892 | IN | denotes | with |
| T13898 | 893-899 | NN | denotes | ΔnleH1 |
| T13899 | 900-906 | NN | denotes | mutant |
| T13900 | 906-907 | -COMMA- | denotes | , |
| T13901 | 908-920 | NN | denotes | phospho-RPS3 |
| T13902 | 921-931 | NN | denotes | expression |
| T13903 | 932-935 | VB | denotes | was |
| T13904 | 936-942 | JJ | denotes | florid |
| T13905 | 943-946 | CC | denotes | and |
| T13906 | 947-954 | JJ | denotes | intense |
| T13907 | 955-956 | -LRB- | denotes | ( |
| T13908 | 956-960 | NNP | denotes | Fig. |
| T13909 | 961-963 | CD | denotes | 6f |
| T13910 | 963-964 | -RRB- | denotes | ) |
| T13911 | 966-971 | DT | denotes | These |
| T13912 | 972-976 | NN | denotes | data |
| T13913 | 977-988 | VB | denotes | demonstrate |
| T13914 | 989-993 | IN | denotes | that |
| T13915 | 994-999 | NN | denotes | NleH1 |
| T13916 | 1000-1008 | VB | denotes | inhibits |
| T13917 | 1009-1013 | NN | denotes | RPS3 |
| T13918 | 1014-1018 | NN | denotes | S209 |
| T13919 | 1019-1034 | NN | denotes | phosphorylation |
| T13920 | 1035-1039 | CC | denotes | both |
| T13921 | 1040-1042 | FW | denotes | in |
| T13922 | 1043-1048 | FW | denotes | vitro |
| T13923 | 1049-1052 | CC | denotes | and |
| T13924 | 1053-1055 | FW | denotes | in |
| T13925 | 1056-1060 | FW | denotes | vivo |
| T13926 | 1060-1061 | -COMMA- | denotes | , |
| T13927 | 1062-1067 | WDT | denotes | which |
| T13928 | 1068-1073 | MD | denotes | might |
| T13929 | 1074-1081 | VB | denotes | benefit |
| T13930 | 1082-1085 | DT | denotes | the |
| T13931 | 1086-1095 | NN | denotes | bacterium |
| T13932 | 1096-1098 | IN | denotes | in |
| T13933 | 1099-1111 | NN | denotes | colonization |
| T13934 | 1112-1115 | CC | denotes | and |
| T13935 | 1116-1128 | NN | denotes | transmission |
| R11032 | T13762 | T13763 | arg1Of | NleH1,inhibits |
| R11033 | T13763 | T13768 | arg1Of | inhibits,vivo |
| R11034 | T13766 | T13763 | arg2Of | phosphorylation,inhibits |
| R11035 | T13766 | T13764 | arg1Of | phosphorylation,RPS3 |
| R11036 | T13766 | T13765 | arg1Of | phosphorylation,S209 |
| R11037 | T13768 | T13767 | arg1Of | vivo,in |
| R11038 | T13769 | T13771 | arg1Of | We,utilized |
| R11039 | T13769 | T13778 | arg1Of | We,determine |
| R11040 | T13771 | T13770 | arg1Of | utilized,previously |
| R11041 | T13771 | T13777 | modOf | utilized,to |
| R11042 | T13776 | T13771 | arg2Of | model,utilized |
| R11043 | T13776 | T13772 | arg1Of | model,a |
| R11044 | T13776 | T13773 | arg1Of | model,gnotobiotic |
| R11045 | T13776 | T13774 | arg1Of | model,piglet |
| R11046 | T13776 | T13775 | arg1Of | model,infection |
| R11047 | T13778 | T13777 | arg1Of | determine,to |
| R11048 | T13780 | T13781 | arg2Of | piglets,infected |
| R11049 | T13780 | T13785 | arg1Of | piglets,died |
| R11050 | T13781 | T13782 | arg1Of | infected,with |
| R11051 | T13784 | T13782 | arg2Of | mutant,with |
| R11052 | T13784 | T13783 | arg1Of | mutant,ΔnleH1 |
| R11053 | T13785 | T13778 | arg2Of | died,determine |
| R11054 | T13785 | T13779 | arg1Of | died,that |
| R11055 | T13785 | T13787 | arg1Of | died,rapidly |
| R11056 | T13785 | T13796 | arg1Of | died,: |
| R11057 | T13787 | T13786 | arg1Of | rapidly,more |
| R11058 | T13787 | T13788 | arg1Of | rapidly,than |
| R11059 | T13789 | T13788 | arg2Of | those,than |
| R11060 | T13789 | T13790 | arg2Of | those,infected |
| R11061 | T13790 | T13791 | arg1Of | infected,with |
| R11062 | T13795 | T13791 | arg2Of | O157,with |
| R11063 | T13795 | T13792 | arg1Of | O157,wild-type |
| R11064 | T13795 | T13793 | arg1Of | O157,E. |
| R11065 | T13795 | T13794 | arg1Of | O157,coli |
| R11066 | T13797 | T13785 | arg2Of | H7,died |
| R11067 | T13798 | T13799 | arg2Of | Piglets,infected |
| R11068 | T13798 | T13802 | arg1Of | Piglets,displayed |
| R11069 | T13799 | T13800 | arg1Of | infected,with |
| R11070 | T13801 | T13800 | arg2Of | ΔnleH1,with |
| R11071 | T13804 | T13802 | arg2Of | disease,displayed |
| R11072 | T13804 | T13803 | arg1Of | disease,clinical |
| R11073 | T13804 | T13805 | arg1Of | disease,consistent |
| R11074 | T13805 | T13806 | arg1Of | consistent,with |
| R11075 | T13805 | T13813 | arg1Of | consistent,with |
| R11076 | T13806 | T13812 | arg1Of | with,but |
| R11077 | T13810 | T13806 | arg2Of | response,with |
| R11078 | T13810 | T13807 | arg1Of | response,a |
| R11079 | T13810 | T13808 | arg1Of | response,robust |
| R11080 | T13810 | T13809 | arg1Of | response,inflammatory |
| R11081 | T13812 | T13811 | arg1Of | but,"," |
| R11082 | T13813 | T13812 | arg2Of | with,but |
| R11083 | T13816 | T13814 | arg2Of | colonization,reduced |
| R11084 | T13816 | T13815 | arg1Of | colonization,bacterial |
| R11085 | T13816 | T13817 | arg1Of | colonization,and |
| R11086 | T13817 | T13813 | arg2Of | and,with |
| R11087 | T13819 | T13817 | arg2Of | diarrhea9,and |
| R11088 | T13819 | T13818 | arg1Of | diarrhea9,little |
| R11089 | T13822 | T13820 | arg2Of | paradoxical,While |
| R11090 | T13822 | T13821 | arg1Of | paradoxical,seemingly |
| R11091 | T13822 | T13823 | arg1Of | paradoxical,"," |
| R11092 | T13822 | T13824 | arg1Of | paradoxical,based |
| R11093 | T13825 | T13824 | arg2Of | on,based |
| R11094 | T13829 | T13825 | arg2Of | data,on |
| R11095 | T13829 | T13826 | arg1Of | data,our |
| R11096 | T13829 | T13827 | arg1Of | data,cell |
| R11097 | T13829 | T13828 | arg1Of | data,culture |
| R11098 | T13829 | T13830 | arg1Of | data,( |
| R11099 | T13832 | T13830 | arg2Of | 6d,( |
| R11100 | T13832 | T13831 | arg1Of | 6d,Fig. |
| R11101 | T13833 | T13830 | arg3Of | ),( |
| R11102 | T13835 | T13836 | arg1Of | we,hypothesized |
| R11103 | T13836 | T13820 | arg1Of | hypothesized,While |
| R11104 | T13836 | T13834 | arg1Of | hypothesized,"," |
| R11105 | T13838 | T13839 | arg1Of | NleH1,blocked |
| R11106 | T13839 | T13836 | arg2Of | blocked,hypothesized |
| R11107 | T13839 | T13837 | arg1Of | blocked,that |
| R11108 | T13839 | T13844 | arg1Of | blocked,vivo |
| R11109 | T13839 | T13845 | arg1Of | blocked,"," |
| R11110 | T13839 | T13847 | modOf | blocked,preventing |
| R11111 | T13842 | T13839 | arg2Of | phosphorylation,blocked |
| R11112 | T13842 | T13840 | arg1Of | phosphorylation,RPS3 |
| R11113 | T13842 | T13841 | arg1Of | phosphorylation,S209 |
| R11114 | T13844 | T13843 | arg1Of | vivo,in |
| R11115 | T13847 | T13846 | arg1Of | preventing,thereby |
| R11116 | T13850 | T13847 | arg2Of | translocation,preventing |
| R11117 | T13850 | T13848 | arg1Of | translocation,RPS3 |
| R11118 | T13850 | T13849 | arg1Of | translocation,nuclear |
| R11119 | T13850 | T13851 | arg1Of | translocation,in |
| R11120 | T13853 | T13851 | arg2Of | piglets,in |
| R11121 | T13853 | T13852 | arg1Of | piglets,infected |
| R11122 | T13854 | T13855 | arg1Of | We,isolated |
| R11123 | T13854 | T13862 | arg1Of | We,subjected |
| R11124 | T13854 | T13866 | arg1Of | We,using |
| R11125 | T13855 | T13858 | arg1Of | isolated,at |
| R11126 | T13855 | T13861 | arg1Of | isolated,and |
| R11127 | T13857 | T13855 | arg2Of | colons,isolated |
| R11128 | T13857 | T13856 | arg1Of | colons,piglet |
| R11129 | T13859 | T13858 | arg2Of | necropsy,at |
| R11130 | T13861 | T13860 | arg1Of | and,"," |
| R11131 | T13862 | T13861 | arg2Of | subjected,and |
| R11132 | T13862 | T13864 | arg1Of | subjected,to |
| R11133 | T13862 | T13866 | modOf | subjected,using |
| R11134 | T13863 | T13862 | arg2Of | them,subjected |
| R11135 | T13865 | T13864 | arg2Of | immunohistochemistry,to |
| R11136 | T13869 | T13866 | arg2Of | antibody,using |
| R11137 | T13869 | T13867 | arg1Of | antibody,our |
| R11138 | T13869 | T13868 | arg1Of | antibody,phospho-RPS3 |
| R11139 | T13870 | T13871 | arg1Of | Consistent,with |
| R11140 | T13873 | T13872 | arg1Of | vitro,in |
| R11141 | T13874 | T13871 | arg2Of | data,with |
| R11142 | T13874 | T13873 | arg1Of | data,vitro |
| R11143 | T13876 | T13870 | arg1Of | piglets,Consistent |
| R11144 | T13876 | T13877 | arg2Of | piglets,infected |
| R11145 | T13876 | T13885 | arg1Of | piglets,exhibited |
| R11146 | T13877 | T13878 | arg1Of | infected,with |
| R11147 | T13882 | T13879 | arg1Of | O157,wild-type |
| R11148 | T13882 | T13880 | arg1Of | O157,E. |
| R11149 | T13882 | T13881 | arg1Of | O157,coli |
| R11150 | T13882 | T13883 | arg1Of | O157,: |
| R11151 | T13883 | T13878 | arg2Of | :,with |
| R11152 | T13884 | T13883 | arg2Of | H7,: |
| R11153 | T13885 | T13870 | modOf | exhibited,Consistent |
| R11154 | T13885 | T13875 | arg1Of | exhibited,"," |
| R11155 | T13885 | T13892 | arg1Of | exhibited,"," |
| R11156 | T13885 | T13893 | arg1Of | exhibited,whereas |
| R11157 | T13886 | T13887 | arg1Of | diffuse,and |
| R11158 | T13888 | T13887 | arg2Of | low,and |
| R11159 | T13891 | T13885 | arg2Of | staining,exhibited |
| R11160 | T13891 | T13886 | arg1Of | staining,diffuse |
| R11161 | T13891 | T13888 | arg1Of | staining,low |
| R11162 | T13891 | T13889 | arg1Of | staining,intensity |
| R11163 | T13891 | T13890 | arg1Of | staining,phospho-RPS3 |
| R11164 | T13895 | T13894 | arg2Of | piglets,in |
| R11165 | T13895 | T13896 | arg2Of | piglets,infected |
| R11166 | T13896 | T13897 | arg1Of | infected,with |
| R11167 | T13899 | T13897 | arg2Of | mutant,with |
| R11168 | T13899 | T13898 | arg1Of | mutant,ΔnleH1 |
| R11169 | T13902 | T13901 | arg1Of | expression,phospho-RPS3 |
| R11170 | T13902 | T13903 | arg1Of | expression,was |
| R11171 | T13902 | T13904 | arg1Of | expression,florid |
| R11172 | T13902 | T13906 | arg1Of | expression,intense |
| R11173 | T13903 | T13893 | arg2Of | was,whereas |
| R11174 | T13903 | T13894 | arg1Of | was,in |
| R11175 | T13903 | T13900 | arg1Of | was,"," |
| R11176 | T13903 | T13907 | arg1Of | was,( |
| R11177 | T13904 | T13905 | arg1Of | florid,and |
| R11178 | T13905 | T13903 | arg2Of | and,was |
| R11179 | T13906 | T13905 | arg2Of | intense,and |
| R11180 | T13908 | T13907 | arg2Of | Fig.,( |
| R11181 | T13908 | T13909 | arg1Of | Fig.,6f |
| R11182 | T13910 | T13907 | arg3Of | ),( |
| R11183 | T13912 | T13911 | arg1Of | data,These |
| R11184 | T13912 | T13913 | arg1Of | data,demonstrate |
| R11185 | T13915 | T13916 | arg1Of | NleH1,inhibits |
| R11186 | T13916 | T13913 | arg2Of | inhibits,demonstrate |
| R11187 | T13916 | T13914 | arg1Of | inhibits,that |
| R11188 | T13916 | T13922 | arg1Of | inhibits,vitro |
| R11189 | T13916 | T13925 | arg1Of | inhibits,vivo |
| R11190 | T13916 | T13926 | arg1Of | inhibits,"," |
| R11191 | T13916 | T13927 | arg1Of | inhibits,which |
| R11192 | T13916 | T13928 | arg1Of | inhibits,might |
| R11193 | T13916 | T13929 | arg1Of | inhibits,benefit |
| R11194 | T13919 | T13916 | arg2Of | phosphorylation,inhibits |
| R11195 | T13919 | T13917 | arg1Of | phosphorylation,RPS3 |
| R11196 | T13919 | T13918 | arg1Of | phosphorylation,S209 |
| R11197 | T13922 | T13921 | arg1Of | vitro,in |
| R11198 | T13922 | T13923 | arg1Of | vitro,and |
| R11199 | T13923 | T13920 | arg1Of | and,both |
| R11200 | T13925 | T13923 | arg2Of | vivo,and |
| R11201 | T13925 | T13924 | arg1Of | vivo,in |
| R11202 | T13929 | T13928 | arg2Of | benefit,might |
| R11203 | T13931 | T13929 | arg2Of | bacterium,benefit |
| R11204 | T13931 | T13930 | arg1Of | bacterium,the |
| R11205 | T13931 | T13932 | arg1Of | bacterium,in |
| R11206 | T13933 | T13934 | arg1Of | colonization,and |
| R11207 | T13934 | T13932 | arg2Of | and,in |
| R11208 | T13935 | T13934 | arg2Of | transmission,and |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13949 | 0-5 | JJ | denotes | NleH1 |
| T13950 | 6-14 | NNS | denotes | inhibits |
| T13951 | 15-19 | NNP | denotes | RPS3 |
| T13952 | 20-24 | NNP | denotes | S209 |
| T13953 | 25-40 | NN | denotes | phosphorylation |
| T13954 | 41-43 | IN | denotes | in |
| T13955 | 44-48 | NN | denotes | vivo |
| T13956 | 49-51 | PRP | denotes | We |
| T13957 | 52-62 | RB | denotes | previously |
| T13958 | 63-71 | VBD | denotes | utilized |
| T13959 | 72-73 | DT | denotes | a |
| T13960 | 74-85 | JJ | denotes | gnotobiotic |
| T13961 | 86-92 | NN | denotes | piglet |
| T13962 | 93-102 | NN | denotes | infection |
| T13963 | 103-108 | NN | denotes | model |
| T13964 | 109-111 | TO | denotes | to |
| T13965 | 112-121 | VB | denotes | determine |
| T13966 | 122-126 | DT | denotes | that |
| T13967 | 127-134 | NNS | denotes | piglets |
| T13968 | 135-143 | VBN | denotes | infected |
| T13969 | 144-148 | IN | denotes | with |
| T13970 | 149-155 | JJ | denotes | ΔnleH1 |
| T13971 | 156-162 | JJ | denotes | mutant |
| T13972 | 163-167 | VBD | denotes | died |
| T13973 | 168-172 | RBR | denotes | more |
| T13974 | 173-180 | RB | denotes | rapidly |
| T13975 | 181-185 | IN | denotes | than |
| T13976 | 186-191 | DT | denotes | those |
| T13977 | 192-200 | VBN | denotes | infected |
| T13978 | 201-205 | IN | denotes | with |
| T13979 | 206-215 | JJ | denotes | wild-type |
| T13980 | 216-218 | NNP | denotes | E. |
| T13981 | 219-223 | NNS | denotes | coli |
| T13982 | 224-228 | NNP | denotes | O157 |
| T13983 | 228-229 | : | denotes | : |
| T13984 | 229-231 | NNP | denotes | H7 |
| T13985 | 231-232 | . | denotes | . |
| T13986 | 233-240 | NNS | denotes | Piglets |
| T13987 | 241-249 | VBN | denotes | infected |
| T13988 | 250-254 | IN | denotes | with |
| T13989 | 255-261 | NNP | denotes | ΔnleH1 |
| T13990 | 262-271 | VBD | denotes | displayed |
| T13991 | 272-280 | JJ | denotes | clinical |
| T13992 | 281-288 | NN | denotes | disease |
| T13993 | 289-299 | JJ | denotes | consistent |
| T13994 | 300-304 | IN | denotes | with |
| T13995 | 305-306 | DT | denotes | a |
| T13996 | 307-313 | JJ | denotes | robust |
| T13997 | 314-326 | JJ | denotes | inflammatory |
| T13998 | 327-335 | NN | denotes | response |
| T13999 | 335-336 | , | denotes | , |
| T14000 | 337-340 | CC | denotes | but |
| T14001 | 341-345 | IN | denotes | with |
| T14002 | 346-353 | JJ | denotes | reduced |
| T14003 | 354-363 | JJ | denotes | bacterial |
| T14004 | 364-376 | NN | denotes | colonization |
| T14005 | 377-380 | CC | denotes | and |
| T14006 | 381-387 | JJ | denotes | little |
| T14007 | 388-397 | NN | denotes | diarrhea9 |
| T14008 | 397-398 | . | denotes | . |
| T14009 | 399-404 | IN | denotes | While |
| T14010 | 405-414 | RB | denotes | seemingly |
| T14011 | 415-426 | JJ | denotes | paradoxical |
| T14012 | 426-427 | , | denotes | , |
| T14013 | 428-433 | VBN | denotes | based |
| T14014 | 434-436 | IN | denotes | on |
| T14015 | 437-440 | PRP$ | denotes | our |
| T14016 | 441-445 | NN | denotes | cell |
| T14017 | 446-453 | NN | denotes | culture |
| T14018 | 454-458 | NNS | denotes | data |
| T14019 | 459-460 | -LRB- | denotes | ( |
| T14020 | 460-464 | NNP | denotes | Fig. |
| T14021 | 465-467 | CD | denotes | 6d |
| T14022 | 467-468 | -RRB- | denotes | ) |
| T14023 | 468-469 | , | denotes | , |
| T14024 | 470-472 | PRP | denotes | we |
| T14025 | 473-485 | VBD | denotes | hypothesized |
| T14026 | 486-490 | IN | denotes | that |
| T14027 | 491-496 | NNP | denotes | NleH1 |
| T14028 | 497-504 | VBD | denotes | blocked |
| T14029 | 505-509 | CD | denotes | RPS3 |
| T14030 | 510-514 | CD | denotes | S209 |
| T14031 | 515-530 | NN | denotes | phosphorylation |
| T14032 | 531-533 | IN | denotes | in |
| T14033 | 534-538 | NN | denotes | vivo |
| T14034 | 538-539 | , | denotes | , |
| T14035 | 540-547 | RB | denotes | thereby |
| T14036 | 548-558 | VBG | denotes | preventing |
| T14037 | 559-563 | JJ | denotes | RPS3 |
| T14038 | 564-571 | JJ | denotes | nuclear |
| T14039 | 572-585 | NN | denotes | translocation |
| T14040 | 586-588 | IN | denotes | in |
| T14041 | 589-597 | JJ | denotes | infected |
| T14042 | 598-605 | NNS | denotes | piglets |
| T14043 | 605-606 | . | denotes | . |
| T14044 | 607-609 | PRP | denotes | We |
| T14045 | 610-618 | VBD | denotes | isolated |
| T14046 | 619-625 | NN | denotes | piglet |
| T14047 | 626-632 | NNS | denotes | colons |
| T14048 | 633-635 | IN | denotes | at |
| T14049 | 636-644 | NN | denotes | necropsy |
| T14050 | 644-645 | , | denotes | , |
| T14051 | 646-649 | CC | denotes | and |
| T14052 | 650-659 | VBD | denotes | subjected |
| T14053 | 660-664 | PRP | denotes | them |
| T14054 | 665-667 | TO | denotes | to |
| T14055 | 668-688 | NN | denotes | immunohistochemistry |
| T14056 | 689-694 | VBG | denotes | using |
| T14057 | 695-698 | PRP$ | denotes | our |
| T14058 | 699-711 | JJ | denotes | phospho-RPS3 |
| T14059 | 712-720 | NN | denotes | antibody |
| T14060 | 720-721 | . | denotes | . |
| T14061 | 722-732 | JJ | denotes | Consistent |
| T14062 | 733-737 | IN | denotes | with |
| T14063 | 738-740 | IN | denotes | in |
| T14064 | 741-746 | NN | denotes | vitro |
| T14065 | 747-751 | NNS | denotes | data |
| T14066 | 751-752 | , | denotes | , |
| T14067 | 753-760 | NNS | denotes | piglets |
| T14068 | 761-769 | VBN | denotes | infected |
| T14069 | 770-774 | IN | denotes | with |
| T14070 | 775-784 | JJ | denotes | wild-type |
| T14071 | 785-787 | NNP | denotes | E. |
| T14072 | 788-792 | NNS | denotes | coli |
| T14073 | 793-797 | NNP | denotes | O157 |
| T14074 | 797-798 | : | denotes | : |
| T14075 | 798-800 | NNP | denotes | H7 |
| T14076 | 801-810 | VBD | denotes | exhibited |
| T14077 | 811-818 | NN | denotes | diffuse |
| T14078 | 819-822 | CC | denotes | and |
| T14079 | 823-826 | JJ | denotes | low |
| T14080 | 827-836 | NN | denotes | intensity |
| T14081 | 837-849 | NN | denotes | phospho-RPS3 |
| T14082 | 850-858 | NN | denotes | staining |
| T14083 | 858-859 | , | denotes | , |
| T14084 | 860-867 | IN | denotes | whereas |
| T14085 | 868-870 | IN | denotes | in |
| T14086 | 871-878 | NNS | denotes | piglets |
| T14087 | 879-887 | VBN | denotes | infected |
| T14088 | 888-892 | IN | denotes | with |
| T14089 | 893-899 | JJ | denotes | ΔnleH1 |
| T14090 | 900-906 | JJ | denotes | mutant |
| T14091 | 906-907 | , | denotes | , |
| T14092 | 908-920 | JJ | denotes | phospho-RPS3 |
| T14093 | 921-931 | NN | denotes | expression |
| T14094 | 932-935 | VBD | denotes | was |
| T14095 | 936-942 | JJ | denotes | florid |
| T14096 | 943-946 | CC | denotes | and |
| T14097 | 947-954 | JJ | denotes | intense |
| T14098 | 955-956 | -LRB- | denotes | ( |
| T14099 | 956-960 | NNP | denotes | Fig. |
| T14100 | 961-963 | CD | denotes | 6f |
| T14101 | 963-964 | -RRB- | denotes | ) |
| T14102 | 964-965 | . | denotes | . |
| T14103 | 966-971 | DT | denotes | These |
| T14104 | 972-976 | NNS | denotes | data |
| T14105 | 977-988 | VBP | denotes | demonstrate |
| T14106 | 989-993 | IN | denotes | that |
| T14107 | 994-999 | JJ | denotes | NleH1 |
| T14108 | 1000-1008 | NNS | denotes | inhibits |
| T14109 | 1009-1013 | NNP | denotes | RPS3 |
| T14110 | 1014-1018 | NNP | denotes | S209 |
| T14111 | 1019-1034 | NN | denotes | phosphorylation |
| T14112 | 1035-1039 | DT | denotes | both |
| T14113 | 1040-1042 | IN | denotes | in |
| T14114 | 1043-1048 | NN | denotes | vitro |
| T14115 | 1049-1052 | CC | denotes | and |
| T14116 | 1053-1055 | IN | denotes | in |
| T14117 | 1056-1060 | NN | denotes | vivo |
| T14118 | 1060-1061 | , | denotes | , |
| T14119 | 1062-1067 | WDT | denotes | which |
| T14120 | 1068-1073 | MD | denotes | might |
| T14121 | 1074-1081 | VB | denotes | benefit |
| T14122 | 1082-1085 | DT | denotes | the |
| T14123 | 1086-1095 | NN | denotes | bacterium |
| T14124 | 1096-1098 | IN | denotes | in |
| T14125 | 1099-1111 | NN | denotes | colonization |
| T14126 | 1112-1115 | CC | denotes | and |
| T14127 | 1116-1128 | NN | denotes | transmission |
| T14128 | 1128-1129 | . | denotes | . |
| R11209 | T13949 | T13950 | nsubj | NleH1,inhibits |
| R11210 | T13950 | T13950 | ROOT | inhibits,inhibits |
| R11211 | T13951 | T13953 | compound | RPS3,phosphorylation |
| R11212 | T13952 | T13953 | compound | S209,phosphorylation |
| R11213 | T13953 | T13950 | dobj | phosphorylation,inhibits |
| R11214 | T13954 | T13950 | prep | in,inhibits |
| R11215 | T13955 | T13954 | pobj | vivo,in |
| R11216 | T13956 | T13958 | nsubj | We,utilized |
| R11217 | T13957 | T13958 | advmod | previously,utilized |
| R11218 | T13958 | T13950 | ccomp | utilized,inhibits |
| R11219 | T13959 | T13963 | det | a,model |
| R11220 | T13960 | T13963 | amod | gnotobiotic,model |
| R11221 | T13961 | T13963 | amod | piglet,model |
| R11222 | T13962 | T13963 | compound | infection,model |
| R11223 | T13963 | T13958 | dobj | model,utilized |
| R11224 | T13964 | T13965 | aux | to,determine |
| R11225 | T13965 | T13963 | relcl | determine,model |
| R11226 | T13966 | T13972 | mark | that,died |
| R11227 | T13967 | T13972 | nsubj | piglets,died |
| R11228 | T13968 | T13967 | acl | infected,piglets |
| R11229 | T13969 | T13968 | prep | with,infected |
| R11230 | T13970 | T13971 | amod | ΔnleH1,mutant |
| R11231 | T13971 | T13972 | nsubj | mutant,died |
| R11232 | T13972 | T13965 | ccomp | died,determine |
| R11233 | T13973 | T13974 | advmod | more,rapidly |
| R11234 | T13974 | T13972 | advmod | rapidly,died |
| R11235 | T13975 | T13974 | prep | than,rapidly |
| R11236 | T13976 | T13975 | pobj | those,than |
| R11237 | T13977 | T13976 | acl | infected,those |
| R11238 | T13978 | T13977 | prep | with,infected |
| R11239 | T13979 | T13982 | amod | wild-type,O157 |
| R11240 | T13980 | T13982 | compound | E.,O157 |
| R11241 | T13981 | T13982 | compound | coli,O157 |
| R11242 | T13982 | T13978 | pobj | O157,with |
| R11243 | T13983 | T13972 | punct | :,died |
| R11244 | T13984 | T13972 | intj | H7,died |
| R11245 | T13985 | T13950 | punct | .,inhibits |
| R11246 | T13986 | T13990 | nsubj | Piglets,displayed |
| R11247 | T13987 | T13986 | acl | infected,Piglets |
| R11248 | T13988 | T13987 | prep | with,infected |
| R11249 | T13989 | T13988 | pobj | ΔnleH1,with |
| R11250 | T13990 | T13990 | ROOT | displayed,displayed |
| R11251 | T13991 | T13992 | amod | clinical,disease |
| R11252 | T13992 | T13990 | dobj | disease,displayed |
| R11253 | T13993 | T13992 | amod | consistent,disease |
| R11254 | T13994 | T13993 | prep | with,consistent |
| R11255 | T13995 | T13998 | det | a,response |
| R11256 | T13996 | T13998 | amod | robust,response |
| R11257 | T13997 | T13998 | amod | inflammatory,response |
| R11258 | T13998 | T13994 | pobj | response,with |
| R11259 | T13999 | T13990 | punct | ",",displayed |
| R11260 | T14000 | T13990 | cc | but,displayed |
| R11261 | T14001 | T13990 | conj | with,displayed |
| R11262 | T14002 | T14004 | amod | reduced,colonization |
| R11263 | T14003 | T14004 | amod | bacterial,colonization |
| R11264 | T14004 | T14001 | pobj | colonization,with |
| R11265 | T14005 | T14004 | cc | and,colonization |
| R11266 | T14006 | T14007 | amod | little,diarrhea9 |
| R11267 | T14007 | T14004 | conj | diarrhea9,colonization |
| R11268 | T14008 | T13990 | punct | .,displayed |
| R11269 | T14009 | T14025 | mark | While,hypothesized |
| R11270 | T14010 | T14011 | advmod | seemingly,paradoxical |
| R11271 | T14011 | T14025 | advcl | paradoxical,hypothesized |
| R11272 | T14012 | T14013 | punct | ",",based |
| R11273 | T14013 | T14011 | prep | based,paradoxical |
| R11274 | T14014 | T14013 | prep | on,based |
| R11275 | T14015 | T14018 | poss | our,data |
| R11276 | T14016 | T14017 | compound | cell,culture |
| R11277 | T14017 | T14018 | compound | culture,data |
| R11278 | T14018 | T14014 | pobj | data,on |
| R11279 | T14019 | T14020 | punct | (,Fig. |
| R11280 | T14020 | T14011 | appos | Fig.,paradoxical |
| R11281 | T14021 | T14020 | nummod | 6d,Fig. |
| R11282 | T14022 | T14020 | punct | ),Fig. |
| R11283 | T14023 | T14025 | punct | ",",hypothesized |
| R11284 | T14024 | T14025 | nsubj | we,hypothesized |
| R11285 | T14025 | T14025 | ROOT | hypothesized,hypothesized |
| R11286 | T14026 | T14028 | mark | that,blocked |
| R11287 | T14027 | T14028 | nsubj | NleH1,blocked |
| R11288 | T14028 | T14025 | ccomp | blocked,hypothesized |
| R11289 | T14029 | T14031 | nummod | RPS3,phosphorylation |
| R11290 | T14030 | T14031 | nummod | S209,phosphorylation |
| R11291 | T14031 | T14028 | dobj | phosphorylation,blocked |
| R11292 | T14032 | T14031 | prep | in,phosphorylation |
| R11293 | T14033 | T14032 | pobj | vivo,in |
| R11294 | T14034 | T14028 | punct | ",",blocked |
| R11295 | T14035 | T14036 | advmod | thereby,preventing |
| R11296 | T14036 | T14028 | advcl | preventing,blocked |
| R11297 | T14037 | T14039 | amod | RPS3,translocation |
| R11298 | T14038 | T14039 | amod | nuclear,translocation |
| R11299 | T14039 | T14036 | dobj | translocation,preventing |
| R11300 | T14040 | T14036 | prep | in,preventing |
| R11301 | T14041 | T14042 | amod | infected,piglets |
| R11302 | T14042 | T14040 | pobj | piglets,in |
| R11303 | T14043 | T14025 | punct | .,hypothesized |
| R11304 | T14044 | T14045 | nsubj | We,isolated |
| R11305 | T14045 | T14045 | ROOT | isolated,isolated |
| R11306 | T14046 | T14047 | compound | piglet,colons |
| R11307 | T14047 | T14045 | dobj | colons,isolated |
| R11308 | T14048 | T14045 | prep | at,isolated |
| R11309 | T14049 | T14048 | pobj | necropsy,at |
| R11310 | T14050 | T14045 | punct | ",",isolated |
| R11311 | T14051 | T14045 | cc | and,isolated |
| R11312 | T14052 | T14045 | conj | subjected,isolated |
| R11313 | T14053 | T14052 | dobj | them,subjected |
| R11314 | T14054 | T14055 | aux | to,immunohistochemistry |
| R11315 | T14055 | T14052 | advcl | immunohistochemistry,subjected |
| R11316 | T14056 | T14052 | advcl | using,subjected |
| R11317 | T14057 | T14059 | poss | our,antibody |
| R11318 | T14058 | T14059 | amod | phospho-RPS3,antibody |
| R11319 | T14059 | T14056 | dobj | antibody,using |
| R11320 | T14060 | T14045 | punct | .,isolated |
| R11321 | T14061 | T14076 | advmod | Consistent,exhibited |
| R11322 | T14062 | T14061 | prep | with,Consistent |
| R11323 | T14063 | T14076 | prep | in,exhibited |
| R11324 | T14064 | T14065 | amod | vitro,data |
| R11325 | T14065 | T14063 | pobj | data,in |
| R11326 | T14066 | T14076 | punct | ",",exhibited |
| R11327 | T14067 | T14076 | nsubj | piglets,exhibited |
| R11328 | T14068 | T14067 | acl | infected,piglets |
| R11329 | T14069 | T14068 | prep | with,infected |
| R11330 | T14070 | T14073 | amod | wild-type,O157 |
| R11331 | T14071 | T14073 | compound | E.,O157 |
| R11332 | T14072 | T14073 | compound | coli,O157 |
| R11333 | T14073 | T14069 | pobj | O157,with |
| R11334 | T14074 | T14076 | punct | :,exhibited |
| R11335 | T14075 | T14076 | nsubj | H7,exhibited |
| R11336 | T14076 | T14076 | ROOT | exhibited,exhibited |
| R11337 | T14077 | T14076 | dobj | diffuse,exhibited |
| R11338 | T14078 | T14077 | cc | and,diffuse |
| R11339 | T14079 | T14080 | amod | low,intensity |
| R11340 | T14080 | T14082 | nmod | intensity,staining |
| R11341 | T14081 | T14082 | compound | phospho-RPS3,staining |
| R11342 | T14082 | T14077 | conj | staining,diffuse |
| R11343 | T14083 | T14076 | punct | ",",exhibited |
| R11344 | T14084 | T14094 | mark | whereas,was |
| R11345 | T14085 | T14094 | prep | in,was |
| R11346 | T14086 | T14085 | pobj | piglets,in |
| R11347 | T14087 | T14086 | acl | infected,piglets |
| R11348 | T14088 | T14087 | prep | with,infected |
| R11349 | T14089 | T14093 | amod | ΔnleH1,expression |
| R11350 | T14090 | T14093 | amod | mutant,expression |
| R11351 | T14091 | T14093 | punct | ",",expression |
| R11352 | T14092 | T14093 | amod | phospho-RPS3,expression |
| R11353 | T14093 | T14088 | pobj | expression,with |
| R11354 | T14094 | T14076 | advcl | was,exhibited |
| R11355 | T14095 | T14094 | acomp | florid,was |
| R11356 | T14096 | T14095 | cc | and,florid |
| R11357 | T14097 | T14095 | conj | intense,florid |
| R11358 | T14098 | T14099 | punct | (,Fig. |
| R11359 | T14099 | T14094 | appos | Fig.,was |
| R11360 | T14100 | T14099 | nummod | 6f,Fig. |
| R11361 | T14101 | T14099 | punct | ),Fig. |
| R11362 | T14102 | T14076 | punct | .,exhibited |
| R11363 | T14103 | T14104 | det | These,data |
| R11364 | T14104 | T14105 | nsubj | data,demonstrate |
| R11365 | T14105 | T14105 | ROOT | demonstrate,demonstrate |
| R11366 | T14106 | T14108 | mark | that,inhibits |
| R11367 | T14107 | T14108 | nsubj | NleH1,inhibits |
| R11368 | T14108 | T14105 | ccomp | inhibits,demonstrate |
| R11369 | T14109 | T14111 | compound | RPS3,phosphorylation |
| R11370 | T14110 | T14111 | compound | S209,phosphorylation |
| R11371 | T14111 | T14108 | dobj | phosphorylation,inhibits |
| R11372 | T14112 | T14113 | preconj | both,in |
| R11373 | T14113 | T14108 | prep | in,inhibits |
| R11374 | T14114 | T14113 | pobj | vitro,in |
| R11375 | T14115 | T14113 | cc | and,in |
| R11376 | T14116 | T14113 | conj | in,in |
| R11377 | T14117 | T14116 | pobj | vivo,in |
| R11378 | T14118 | T14117 | punct | ",",vivo |
| R11379 | T14119 | T14121 | nsubj | which,benefit |
| R11380 | T14120 | T14121 | aux | might,benefit |
| R11381 | T14121 | T14108 | relcl | benefit,inhibits |
| R11382 | T14122 | T14123 | det | the,bacterium |
| R11383 | T14123 | T14121 | dobj | bacterium,benefit |
| R11384 | T14124 | T14121 | prep | in,benefit |
| R11385 | T14125 | T14124 | pobj | colonization,in |
| R11386 | T14126 | T14125 | cc | and,colonization |
| R11387 | T14127 | T14125 | conj | transmission,colonization |
| R11388 | T14128 | T14105 | punct | .,demonstrate |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13726 | 626-632 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colons |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14164 | 25-40 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T14165 | 515-530 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T14166 | 1019-1034 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T14167 | 314-335 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammatory response |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14168 | 712-720 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14169 | 441-445 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T14170 | 712-720 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibody |
| T14171 | 712-720 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibody |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13755 | 0-48 | Sentence | denotes | NleH1 inhibits RPS3 S209 phosphorylation in vivo |
| T13756 | 49-232 | Sentence | denotes | We previously utilized a gnotobiotic piglet infection model to determine that piglets infected with ΔnleH1 mutant died more rapidly than those infected with wild-type E. coli O157:H7. |
| T13757 | 233-398 | Sentence | denotes | Piglets infected with ΔnleH1 displayed clinical disease consistent with a robust inflammatory response, but with reduced bacterial colonization and little diarrhea9. |
| T13758 | 399-606 | Sentence | denotes | While seemingly paradoxical, based on our cell culture data (Fig. 6d), we hypothesized that NleH1 blocked RPS3 S209 phosphorylation in vivo, thereby preventing RPS3 nuclear translocation in infected piglets. |
| T13759 | 607-721 | Sentence | denotes | We isolated piglet colons at necropsy, and subjected them to immunohistochemistry using our phospho-RPS3 antibody. |
| T13760 | 722-965 | Sentence | denotes | Consistent with in vitro data, piglets infected with wild-type E. coli O157:H7 exhibited diffuse and low intensity phospho-RPS3 staining, whereas in piglets infected with ΔnleH1 mutant, phospho-RPS3 expression was florid and intense (Fig. 6f). |
| T13761 | 966-1129 | Sentence | denotes | These data demonstrate that NleH1 inhibits RPS3 S209 phosphorylation both in vitro and in vivo, which might benefit the bacterium in colonization and transmission. |
| T127 | 0-48 | Sentence | denotes | NleH1 inhibits RPS3 S209 phosphorylation in vivo |
| T128 | 49-232 | Sentence | denotes | We previously utilized a gnotobiotic piglet infection model to determine that piglets infected with ΔnleH1 mutant died more rapidly than those infected with wild-type E. coli O157:H7. |
| T129 | 233-398 | Sentence | denotes | Piglets infected with ΔnleH1 displayed clinical disease consistent with a robust inflammatory response, but with reduced bacterial colonization and little diarrhea9. |
| T130 | 399-606 | Sentence | denotes | While seemingly paradoxical, based on our cell culture data (Fig. 6d), we hypothesized that NleH1 blocked RPS3 S209 phosphorylation in vivo, thereby preventing RPS3 nuclear translocation in infected piglets. |
| T131 | 607-721 | Sentence | denotes | We isolated piglet colons at necropsy, and subjected them to immunohistochemistry using our phospho-RPS3 antibody. |
| T132 | 722-965 | Sentence | denotes | Consistent with in vitro data, piglets infected with wild-type E. coli O157:H7 exhibited diffuse and low intensity phospho-RPS3 staining, whereas in piglets infected with ΔnleH1 mutant, phospho-RPS3 expression was florid and intense (Fig. 6f). |
| T133 | 966-1129 | Sentence | denotes | These data demonstrate that NleH1 inhibits RPS3 S209 phosphorylation both in vitro and in vivo, which might benefit the bacterium in colonization and transmission. |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue | Speculation |
|---|---|---|---|---|---|
| T14274 | 0-5 | Protein | denotes | NleH1 | |
| T14275 | 6-14 | Negative_regulation | denotes | inhibits | |
| T14276 | 15-19 | Protein | denotes | RPS3 | |
| T14277 | 20-24 | Entity | denotes | S209 | |
| T14278 | 25-40 | Phosphorylation | denotes | phosphorylation | |
| T14279 | 149-155 | Protein | denotes | ΔnleH1 | |
| T14280 | 255-261 | Protein | denotes | ΔnleH1 | |
| T14281 | 491-496 | Protein | denotes | NleH1 | |
| T14282 | 497-504 | Negative_regulation | denotes | blocked | |
| T14283 | 505-509 | Protein | denotes | RPS3 | |
| T14284 | 510-514 | Entity | denotes | S209 | |
| T14285 | 515-530 | Phosphorylation | denotes | phosphorylation | |
| T14286 | 548-558 | Negative_regulation | denotes | preventing | true |
| T14287 | 559-563 | Protein | denotes | RPS3 | |
| T14288 | 564-571 | Entity | denotes | nuclear | |
| T14289 | 572-585 | Localization | denotes | translocation | |
| T14290 | 823-826 | Negative_regulation | denotes | low | |
| T14291 | 837-844 | Phosphorylation | denotes | phospho | |
| T14292 | 845-849 | Protein | denotes | RPS3 | |
| T14293 | 893-899 | Protein | denotes | ΔnleH1 | |
| T14294 | 908-915 | Phosphorylation | denotes | phospho | |
| T14295 | 916-920 | Protein | denotes | RPS3 | |
| T14296 | 947-954 | Positive_regulation | denotes | intense | |
| T14297 | 994-999 | Protein | denotes | NleH1 | |
| T14298 | 1000-1008 | Negative_regulation | denotes | inhibits | |
| T14299 | 1009-1013 | Protein | denotes | RPS3 | |
| T14300 | 1014-1018 | Entity | denotes | S209 | |
| T14301 | 1019-1034 | Phosphorylation | denotes | phosphorylation | |
| R11478 | T14274 | T14275 | causeOf | NleH1,inhibits | |
| R11479 | T14277 | T14278 | themeOf | S209,phosphorylation | |
| R11480 | T14277 | T14276 | partOf | S209,RPS3 | |
| R11481 | T14278 | T14275 | themeOf | phosphorylation,inhibits | |
| R11482 | T14281 | T14282 | causeOf | NleH1,blocked | |
| R11483 | T14282 | T14286 | causeOf | blocked,preventing | |
| R11484 | T14284 | T14285 | themeOf | S209,phosphorylation | |
| R11485 | T14284 | T14283 | partOf | S209,RPS3 | |
| R11486 | T14285 | T14282 | themeOf | phosphorylation,blocked | |
| R11487 | T14287 | T14289 | themeOf | RPS3,translocation | |
| R11488 | T14288 | T14289 | locationOf | nuclear,translocation | |
| R11489 | T14289 | T14286 | themeOf | translocation,preventing | |
| R11490 | T14291 | T14290 | themeOf | phospho,low | |
| R11491 | T14292 | T14291 | themeOf | RPS3,phospho | |
| R11492 | T14293 | T14296 | causeOf | ΔnleH1,intense | |
| R11493 | T14294 | T14296 | themeOf | phospho,intense | |
| R11494 | T14295 | T14294 | themeOf | RPS3,phospho | |
| R11495 | T14297 | T14298 | causeOf | NleH1,inhibits | |
| R11496 | T14300 | T14301 | themeOf | S209,phosphorylation | |
| R11497 | T14300 | T14299 | partOf | S209,RPS3 | |
| R11498 | T14301 | T14298 | themeOf | phosphorylation,inhibits |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14172 | 15-24 | Protein | denotes | RPS3 S209 |
| T14173 | 25-40 | Phosphorylation | denotes | phosphorylation |
| T14174 | 6-14 | Negative_regulation | denotes | inhibits |
| T14175 | 255-261 | Protein | denotes | ΔnleH1 |
| T14176 | 491-496 | Protein | denotes | NleH1 |
| T14177 | 505-514 | Protein | denotes | RPS3 S209 |
| T14178 | 559-563 | Protein | denotes | RPS3 |
| T14179 | 515-530 | Phosphorylation | denotes | phosphorylation |
| T14180 | 564-571 | Entity | denotes | nuclear |
| T14181 | 572-585 | Localization | denotes | translocation |
| T14182 | 497-504 | Negative_regulation | denotes | blocked |
| T14183 | 548-558 | Negative_regulation | denotes | preventing |
| T14184 | 707-711 | Protein | denotes | RPS3 |
| T14185 | 845-849 | Protein | denotes | RPS3 |
| T14186 | 916-920 | Protein | denotes | RPS3 |
| T14187 | 921-931 | Gene_expression | denotes | expression |
| T14188 | 994-999 | Protein | denotes | NleH1 |
| T14189 | 1009-1018 | Protein | denotes | RPS3 S209 |
| T14190 | 1019-1034 | Phosphorylation | denotes | phosphorylation |
| T14191 | 1000-1008 | Negative_regulation | denotes | inhibits |
| R11410 | T14172 | T14173 | themeOf | RPS3 S209,phosphorylation |
| R11411 | T14173 | T14174 | themeOf | phosphorylation,inhibits |
| R11412 | T14176 | T14182 | causeOf | NleH1,blocked |
| R11413 | T14177 | T14179 | themeOf | RPS3 S209,phosphorylation |
| R11414 | T14178 | T14181 | themeOf | RPS3,translocation |
| R11415 | T14179 | T14182 | themeOf | phosphorylation,blocked |
| R11416 | T14180 | T14181 | locationOf | nuclear,translocation |
| R11417 | T14181 | T14183 | themeOf | translocation,preventing |
| R11418 | T14186 | T14187 | themeOf | RPS3,expression |
| R11419 | T14188 | T14191 | causeOf | NleH1,inhibits |
| R11420 | T14189 | T14190 | themeOf | RPS3 S209,phosphorylation |
| R11421 | T14190 | T14191 | themeOf | phosphorylation,inhibits |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue | Speculation |
|---|---|---|---|---|---|
| T13727 | 0-5 | Protein | denotes | NleH1 | |
| T13728 | 6-14 | Negative_regulation | denotes | inhibits | |
| T13729 | 15-19 | Protein | denotes | RPS3 | |
| T13730 | 20-24 | Entity | denotes | S209 | |
| T13731 | 25-40 | Phosphorylation | denotes | phosphorylation | |
| T13732 | 149-155 | Protein | denotes | ΔnleH1 | |
| T13733 | 255-261 | Protein | denotes | ΔnleH1 | |
| T13734 | 491-496 | Protein | denotes | NleH1 | |
| T13735 | 497-504 | Negative_regulation | denotes | blocked | |
| T13736 | 505-509 | Protein | denotes | RPS3 | |
| T13737 | 510-514 | Entity | denotes | S209 | |
| T13738 | 515-530 | Phosphorylation | denotes | phosphorylation | |
| T13739 | 548-558 | Negative_regulation | denotes | preventing | true |
| T13740 | 559-563 | Protein | denotes | RPS3 | |
| T13741 | 564-571 | Entity | denotes | nuclear | |
| T13742 | 572-585 | Localization | denotes | translocation | |
| T13743 | 823-826 | Negative_regulation | denotes | low | |
| T13744 | 837-844 | Phosphorylation | denotes | phospho | |
| T13745 | 845-849 | Protein | denotes | RPS3 | |
| T13746 | 893-899 | Protein | denotes | ΔnleH1 | |
| T13747 | 908-915 | Phosphorylation | denotes | phospho | |
| T13748 | 916-920 | Protein | denotes | RPS3 | |
| T13749 | 947-954 | Positive_regulation | denotes | intense | |
| T13750 | 994-999 | Protein | denotes | NleH1 | |
| T13751 | 1000-1008 | Negative_regulation | denotes | inhibits | |
| T13752 | 1009-1013 | Protein | denotes | RPS3 | |
| T13753 | 1014-1018 | Entity | denotes | S209 | |
| T13754 | 1019-1034 | Phosphorylation | denotes | phosphorylation | |
| R11014 | T13731 | T13728 | themeOf | phosphorylation,inhibits | |
| R11015 | T13734 | T13735 | causeOf | NleH1,blocked | |
| R11016 | T13735 | T13739 | causeOf | blocked,preventing | |
| R11017 | T13737 | T13738 | themeOf | S209,phosphorylation | |
| R11018 | T13737 | T13736 | partOf | S209,RPS3 | |
| R11019 | T13738 | T13735 | themeOf | phosphorylation,blocked | |
| R11020 | T13740 | T13742 | themeOf | RPS3,translocation | |
| R11021 | T13741 | T13742 | locationOf | nuclear,translocation | |
| R11022 | T13742 | T13739 | themeOf | translocation,preventing | |
| R11023 | T13744 | T13743 | themeOf | phospho,low | |
| R11024 | T13745 | T13744 | themeOf | RPS3,phospho | |
| R11025 | T13746 | T13749 | causeOf | ΔnleH1,intense | |
| R11026 | T13747 | T13749 | themeOf | phospho,intense | |
| R11027 | T13748 | T13747 | themeOf | RPS3,phospho | |
| R11028 | T13750 | T13751 | causeOf | NleH1,inhibits | |
| R11029 | T13753 | T13754 | themeOf | S209,phosphorylation | |
| R11030 | T13753 | T13752 | partOf | S209,RPS3 | |
| R11031 | T13754 | T13751 | themeOf | phosphorylation,inhibits | |
| R11011 | T13727 | T13728 | causeOf | NleH1,inhibits | |
| R11012 | T13730 | T13731 | themeOf | S209,phosphorylation | |
| R11013 | T13730 | T13729 | partOf | S209,RPS3 |
test2
| Id | Subject | Object | Predicate | Lexical cue | Speculation |
|---|---|---|---|---|---|
| T13717 | 893-899 | Protein | denotes | ΔnleH1 | |
| T13718 | 908-915 | Phosphorylation | denotes | phospho | |
| T13719 | 916-920 | Protein | denotes | RPS3 | |
| T13720 | 921-931 | Gene_expression | denotes | expression | |
| T13721 | 994-999 | Protein | denotes | NleH1 | |
| T13722 | 1000-1008 | Negative_regulation | denotes | inhibits | |
| T13723 | 1009-1013 | Protein | denotes | RPS3 | |
| T13724 | 1014-1018 | Entity | denotes | S209 | |
| T13725 | 1019-1034 | Phosphorylation | denotes | phosphorylation | |
| T13700 | 0-5 | Protein | denotes | NleH1 | |
| T13701 | 6-14 | Negative_regulation | denotes | inhibits | |
| T13702 | 15-19 | Protein | denotes | RPS3 | |
| T13703 | 20-24 | Entity | denotes | S209 | |
| T13704 | 25-40 | Phosphorylation | denotes | phosphorylation | true |
| T13705 | 149-155 | Protein | denotes | ΔnleH1 | |
| T13706 | 255-261 | Protein | denotes | ΔnleH1 | |
| T13707 | 491-496 | Protein | denotes | NleH1 | |
| T13708 | 497-504 | Negative_regulation | denotes | blocked | |
| T13709 | 505-509 | Protein | denotes | RPS3 | |
| T13710 | 510-514 | Entity | denotes | S209 | |
| T13711 | 515-530 | Phosphorylation | denotes | phosphorylation | |
| T13712 | 548-558 | Negative_regulation | denotes | preventing | |
| T13713 | 559-563 | Protein | denotes | RPS3 | |
| T13714 | 564-571 | Entity | denotes | nuclear | |
| T13715 | 572-585 | Localization | denotes | translocation | |
| T13716 | 845-849 | Protein | denotes | RPS3 | |
| R10995 | T13700 | T13701 | causeOf | NleH1,inhibits | |
| R10996 | T13703 | T13704 | themeOf | S209,phosphorylation | |
| R10997 | T13703 | T13702 | partOf | S209,RPS3 | |
| R10998 | T13704 | T13701 | themeOf | phosphorylation,inhibits | |
| R10999 | T13707 | T13708 | causeOf | NleH1,blocked | |
| R11000 | T13708 | T13712 | causeOf | blocked,preventing | |
| R11001 | T13710 | T13709 | partOf | S209,RPS3 | |
| R11002 | T13710 | T13711 | themeOf | S209,phosphorylation | |
| R11003 | T13711 | T13708 | themeOf | phosphorylation,blocked | |
| R11004 | T13713 | T13715 | themeOf | RPS3,translocation | |
| R11005 | T13714 | T13715 | locationOf | nuclear,translocation | |
| R11006 | T13715 | T13712 | themeOf | translocation,preventing | |
| R11007 | T13721 | T13722 | causeOf | NleH1,inhibits | |
| R11008 | T13724 | T13725 | themeOf | S209,phosphorylation | |
| R11009 | T13724 | T13723 | partOf | S209,RPS3 | |
| R11010 | T13725 | T13722 | themeOf | phosphorylation,inhibits |