PMC:3062687 / 1793-2063 JSONTXT

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    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1146","span":{"begin":115,"end":120},"obj":"P23396"},{"id":"T1147","span":{"begin":187,"end":191},"obj":"P23396"},{"id":"T1148","span":{"begin":233,"end":236},"obj":"P21579"},{"id":"T1149","span":{"begin":233,"end":236},"obj":"Q04206"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"gic Escherichia coli (EHEC)9. In particular, the E. coli O157:H7 type III secretion system (T3SS) effector protein NleH1 selectively blocks NF-κB target gene transcription by attenuating RPS3 nuclear translocation, without affecting p65 localization9. Nonetheless, how s"}

    pmc-enju-pas

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    bionlp-st-ge-2016-spacy-parsed

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In particular, the E. coli O157:H7 type III secretion system (T3SS) effector protein NleH1 selectively blocks NF-κB target gene transcription by attenuating RPS3 nuclear translocation, without affecting p65 localization9. Nonetheless, how s"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T1585","span":{"begin":158,"end":171},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T1590","span":{"begin":74,"end":83},"obj":"http://purl.obolibrary.org/obo/GO_0046903"},{"id":"T1591","span":{"begin":158,"end":186},"obj":"http://purl.obolibrary.org/obo/GO_0031555"}],"text":"gic Escherichia coli (EHEC)9. In particular, the E. coli O157:H7 type III secretion system (T3SS) effector protein NleH1 selectively blocks NF-κB target gene transcription by attenuating RPS3 nuclear translocation, without affecting p65 localization9. Nonetheless, how s"}

    sentences

    {"project":"sentences","denotations":[{"id":"T785","span":{"begin":30,"end":251},"obj":"Sentence"},{"id":"T14","span":{"begin":30,"end":251},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"gic Escherichia coli (EHEC)9. In particular, the E. coli O157:H7 type III secretion system (T3SS) effector protein NleH1 selectively blocks NF-κB target gene transcription by attenuating RPS3 nuclear translocation, without affecting p65 localization9. Nonetheless, how s"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T1847","span":{"begin":115,"end":120},"obj":"Protein"},{"id":"T1848","span":{"begin":175,"end":186},"obj":"Negative_regulation"},{"id":"T1849","span":{"begin":187,"end":191},"obj":"Protein"},{"id":"T1850","span":{"begin":192,"end":199},"obj":"Entity"},{"id":"T1851","span":{"begin":200,"end":213},"obj":"Localization"},{"id":"T1852","span":{"begin":223,"end":232},"obj":"Regulation"},{"id":"T1853","span":{"begin":233,"end":236},"obj":"Protein"},{"id":"T1854","span":{"begin":237,"end":249},"obj":"Localization"}],"relations":[{"id":"R1475","pred":"causeOf","subj":"T1847","obj":"T1852"},{"id":"R1476","pred":"causeOf","subj":"T1847","obj":"T1848"},{"id":"R1478","pred":"themeOf","subj":"T1849","obj":"T1851"},{"id":"R1480","pred":"locationOf","subj":"T1850","obj":"T1851"},{"id":"R1481","pred":"themeOf","subj":"T1851","obj":"T1848"},{"id":"R1482","pred":"themeOf","subj":"T1853","obj":"T1854"},{"id":"R1483","pred":"themeOf","subj":"T1854","obj":"T1852"}],"attributes":[{"id":"M31","pred":"Negation","subj":"T1852","obj":"true"}],"text":"gic Escherichia coli (EHEC)9. In particular, the E. coli O157:H7 type III secretion system (T3SS) effector protein NleH1 selectively blocks NF-κB target gene transcription by attenuating RPS3 nuclear translocation, without affecting p65 localization9. Nonetheless, how s"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T1635","span":{"begin":115,"end":120},"obj":"Protein"},{"id":"T1636","span":{"begin":140,"end":145},"obj":"Protein"},{"id":"T1637","span":{"begin":187,"end":191},"obj":"Protein"},{"id":"T1638","span":{"begin":233,"end":236},"obj":"Protein"},{"id":"T1639","span":{"begin":237,"end":250},"obj":"Protein"},{"id":"T1640","span":{"begin":74,"end":83},"obj":"Localization"},{"id":"T1641","span":{"begin":158,"end":171},"obj":"Transcription"},{"id":"T1642","span":{"begin":192,"end":199},"obj":"Entity"},{"id":"T1643","span":{"begin":200,"end":213},"obj":"Localization"},{"id":"T1644","span":{"begin":175,"end":186},"obj":"Negative_regulation"}],"relations":[{"id":"R1377","pred":"themeOf","subj":"T1635","obj":"T1640"},{"id":"R1378","pred":"themeOf","subj":"T1636","obj":"T1641"},{"id":"R1379","pred":"themeOf","subj":"T1637","obj":"T1643"},{"id":"R1382","pred":"locationOf","subj":"T1642","obj":"T1643"},{"id":"R1383","pred":"themeOf","subj":"T1643","obj":"T1644"}],"text":"gic Escherichia coli (EHEC)9. In particular, the E. coli O157:H7 type III secretion system (T3SS) effector protein NleH1 selectively blocks NF-κB target gene transcription by attenuating RPS3 nuclear translocation, without affecting p65 localization9. Nonetheless, how s"}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T742","span":{"begin":115,"end":120},"obj":"Protein"},{"id":"T743","span":{"begin":175,"end":186},"obj":"Negative_regulation"},{"id":"T744","span":{"begin":187,"end":191},"obj":"Protein"},{"id":"T745","span":{"begin":192,"end":199},"obj":"Entity"},{"id":"T746","span":{"begin":200,"end":213},"obj":"Localization"},{"id":"T747","span":{"begin":223,"end":232},"obj":"Regulation"},{"id":"T748","span":{"begin":233,"end":236},"obj":"Protein"},{"id":"T749","span":{"begin":237,"end":249},"obj":"Localization"}],"relations":[{"id":"R597","pred":"causeOf","subj":"T742","obj":"T747"},{"id":"R598","pred":"causeOf","subj":"T742","obj":"T743"},{"id":"R599","pred":"themeOf","subj":"T744","obj":"T746"},{"id":"R600","pred":"locationOf","subj":"T745","obj":"T746"},{"id":"R601","pred":"themeOf","subj":"T746","obj":"T743"},{"id":"R602","pred":"themeOf","subj":"T748","obj":"T749"},{"id":"R603","pred":"themeOf","subj":"T749","obj":"T747"}],"attributes":[{"id":"M17","pred":"Negation","subj":"T747","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"gic Escherichia coli (EHEC)9. In particular, the E. coli O157:H7 type III secretion system (T3SS) effector protein NleH1 selectively blocks NF-κB target gene transcription by attenuating RPS3 nuclear translocation, without affecting p65 localization9. Nonetheless, how s"}

    test2

    {"project":"test2","denotations":[{"id":"T689","span":{"begin":115,"end":120},"obj":"Protein"},{"id":"T690","span":{"begin":175,"end":186},"obj":"Negative_regulation"},{"id":"T691","span":{"begin":187,"end":191},"obj":"Protein"},{"id":"T692","span":{"begin":192,"end":199},"obj":"Entity"},{"id":"T693","span":{"begin":200,"end":213},"obj":"Localization"},{"id":"T694","span":{"begin":223,"end":232},"obj":"Regulation"},{"id":"T695","span":{"begin":233,"end":236},"obj":"Protein"},{"id":"T696","span":{"begin":237,"end":250},"obj":"Localization"}],"relations":[{"id":"R564","pred":"causeOf","subj":"T689","obj":"T690"},{"id":"R565","pred":"causeOf","subj":"T689","obj":"T694"},{"id":"R566","pred":"themeOf","subj":"T691","obj":"T693"},{"id":"R567","pred":"locationOf","subj":"T692","obj":"T693"},{"id":"R568","pred":"themeOf","subj":"T693","obj":"T690"},{"id":"R569","pred":"themeOf","subj":"T695","obj":"T696"},{"id":"R570","pred":"themeOf","subj":"T696","obj":"T694"}],"text":"gic Escherichia coli (EHEC)9. In particular, the E. coli O157:H7 type III secretion system (T3SS) effector protein NleH1 selectively blocks NF-κB target gene transcription by attenuating RPS3 nuclear translocation, without affecting p65 localization9. Nonetheless, how s"}