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PMC:2889865 / 31215-31448 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14366 0-3 DT denotes The
T14367 4-13 NN denotes solutions
T14368 14-18 VB denotes were
T14369 19-24 VB denotes mixed
T14370 25-27 IN denotes by
T14371 28-37 VB denotes vortexing
T14372 38-46 VB denotes followed
T14373 47-49 IN denotes by
T14374 50-64 NN denotes centrifugation
T14375 65-67 IN denotes at
T14376 68-74 CD denotes 12,000
T14377 75-78 NN denotes rpm
T14378 79-82 IN denotes for
T14379 83-85 CD denotes 15
T14380 86-89 NN denotes min
T14381 90-92 IN denotes at
T14382 93-97 NNP denotes 4°C.
T14383 98-101 DT denotes The
T14384 102-107 JJ denotes upper
T14385 108-113 NN denotes phase
T14386 114-117 VB denotes was
T14387 118-129 VB denotes transferred
T14388 130-132 TO denotes to
T14389 133-134 DT denotes a
T14390 135-138 JJ denotes new
T14391 139-143 NN denotes tube
T14392 144-152 VB denotes followed
T14393 153-155 IN denotes by
T14394 156-164 NN denotes addition
T14395 165-167 IN denotes of
T14396 168-171 CD denotes 100
T14397 172-174 NN denotes μl
T14398 175-187 NN denotes iso-propanol
T14399 188-191 CC denotes and
T14400 192-201 VB denotes incubated
T14401 202-204 IN denotes at
T14402 205-209 NN denotes room
T14403 210-221 NN denotes temperature
T14404 222-225 IN denotes for
T14405 226-228 CD denotes 10
T14406 229-232 NN denotes min
R11634 T14367 T14366 arg1Of solutions,The
R11635 T14367 T14368 arg1Of solutions,were
R11636 T14367 T14369 arg2Of solutions,mixed
R11637 T14369 T14368 arg2Of mixed,were
R11638 T14369 T14370 arg1Of mixed,by
R11639 T14372 T14370 arg2Of followed,by
R11640 T14372 T14371 arg2Of followed,vortexing
R11641 T14372 T14375 arg1Of followed,at
R11642 T14372 T14378 arg1Of followed,for
R11643 T14374 T14372 arg1Of centrifugation,followed
R11644 T14374 T14373 arg2Of centrifugation,by
R11645 T14377 T14375 arg2Of rpm,at
R11646 T14377 T14376 arg1Of rpm,"12,000"
R11647 T14380 T14378 arg2Of min,for
R11648 T14380 T14379 arg1Of min,15
R11649 T14380 T14381 arg1Of min,at
R11650 T14382 T14381 arg2Of 4°C.,at
R11651 T14385 T14383 arg1Of phase,The
R11652 T14385 T14384 arg1Of phase,upper
R11653 T14385 T14386 arg1Of phase,was
R11654 T14385 T14387 arg2Of phase,transferred
R11655 T14385 T14400 arg2Of phase,incubated
R11656 T14387 T14388 arg1Of transferred,to
R11657 T14387 T14392 modOf transferred,followed
R11658 T14387 T14399 arg1Of transferred,and
R11659 T14391 T14388 arg2Of tube,to
R11660 T14391 T14389 arg1Of tube,a
R11661 T14391 T14390 arg1Of tube,new
R11662 T14394 T14392 arg1Of addition,followed
R11663 T14394 T14393 arg2Of addition,by
R11664 T14394 T14395 arg1Of addition,of
R11665 T14398 T14395 arg2Of iso-propanol,of
R11666 T14398 T14396 arg1Of iso-propanol,100
R11667 T14398 T14397 arg1Of iso-propanol,μl
R11668 T14399 T14368 modOf and,were
R11669 T14399 T14386 arg2Of and,was
R11670 T14400 T14399 arg2Of incubated,and
R11671 T14400 T14401 arg1Of incubated,at
R11672 T14400 T14404 arg1Of incubated,for
R11673 T14403 T14401 arg2Of temperature,at
R11674 T14403 T14402 arg1Of temperature,room
R11675 T14406 T14404 arg2Of min,for
R11676 T14406 T14405 arg1Of min,10

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14196 0-3 DT denotes The
T14197 4-13 NNS denotes solutions
T14198 14-18 VBD denotes were
T14199 19-24 VBN denotes mixed
T14200 25-27 IN denotes by
T14201 28-37 VBG denotes vortexing
T14202 38-46 VBN denotes followed
T14203 47-49 IN denotes by
T14204 50-64 NN denotes centrifugation
T14205 65-67 IN denotes at
T14206 68-74 CD denotes 12,000
T14207 75-78 NN denotes rpm
T14208 79-82 IN denotes for
T14209 83-85 CD denotes 15
T14210 86-89 NN denotes min
T14211 90-92 IN denotes at
T14212 93-94 CD denotes 4
T14213 94-95 CD denotes °
T14214 95-96 NNP denotes C
T14215 96-97 . denotes .
T14216 98-101 DT denotes The
T14217 102-107 JJ denotes upper
T14218 108-113 NN denotes phase
T14219 114-117 VBD denotes was
T14220 118-129 VBN denotes transferred
T14221 130-132 TO denotes to
T14222 133-134 DT denotes a
T14223 135-138 JJ denotes new
T14224 139-143 NN denotes tube
T14225 144-152 VBN denotes followed
T14226 153-155 IN denotes by
T14227 156-164 NN denotes addition
T14228 165-167 IN denotes of
T14229 168-171 CD denotes 100
T14230 172-174 NN denotes μl
T14231 175-187 NN denotes iso-propanol
T14232 188-191 CC denotes and
T14233 192-201 VBD denotes incubated
T14234 202-204 IN denotes at
T14235 205-209 NN denotes room
T14236 210-221 NN denotes temperature
T14237 222-225 IN denotes for
T14238 226-228 CD denotes 10
T14239 229-232 NN denotes min
T14240 232-233 . denotes .
R11469 T14200 T14199 agent by,mixed
R11470 T14201 T14200 pobj vortexing,by
R11471 T14202 T14201 acl followed,vortexing
R11472 T14203 T14202 agent by,followed
R11473 T14204 T14203 pobj centrifugation,by
R11474 T14205 T14202 prep at,followed
R11475 T14206 T14207 nummod "12,000",rpm
R11476 T14207 T14205 pobj rpm,at
R11477 T14208 T14207 prep for,rpm
R11478 T14209 T14210 nummod 15,min
R11479 T14210 T14208 pobj min,for
R11480 T14211 T14201 prep at,vortexing
R11481 T14212 T14213 nummod 4,°
R11482 T14213 T14211 pobj °,at
R11483 T14214 T14201 dobj C,vortexing
R11484 T14215 T14199 punct .,mixed
R11485 T14216 T14218 det The,phase
R11486 T14217 T14218 amod upper,phase
R11487 T14218 T14220 nsubjpass phase,transferred
R11488 T14219 T14220 auxpass was,transferred
R11489 T14220 T14220 ROOT transferred,transferred
R11490 T14221 T14220 prep to,transferred
R11491 T14222 T14224 det a,tube
R11492 T14223 T14224 amod new,tube
R11493 T14224 T14221 pobj tube,to
R11494 T14225 T14224 acl followed,tube
R11495 T14226 T14225 agent by,followed
R11496 T14227 T14226 pobj addition,by
R11497 T14228 T14227 prep of,addition
R11498 T14229 T14231 nummod 100,iso-propanol
R11499 T14230 T14231 compound μl,iso-propanol
R11500 T14231 T14228 pobj iso-propanol,of
R11501 T14232 T14225 cc and,followed
R11502 T14233 T14225 conj incubated,followed
R11503 T14234 T14233 prep at,incubated
R11504 T14235 T14236 compound room,temperature
R11505 T14236 T14234 pobj temperature,at
R11506 T14237 T14233 prep for,incubated
R11507 T14238 T14239 nummod 10,min
R11508 T14239 T14237 pobj min,for
R11509 T14240 T14220 punct .,transferred
R11465 T14196 T14197 det The,solutions
R11466 T14197 T14199 nsubjpass solutions,mixed
R11467 T14198 T14199 auxpass were,mixed
R11468 T14199 T14199 ROOT mixed,mixed

UBERON-AE

Id Subject Object Predicate Lexical cue
T14124 139-143 http://purl.obolibrary.org/obo/UBERON_0000025 denotes tube

sentences

Id Subject Object Predicate Lexical cue
T14129 0-233 Sentence denotes The solutions were mixed by vortexing followed by centrifugation at 12,000 rpm for 15 min at 4°C. The upper phase was transferred to a new tube followed by addition of 100 μl iso-propanol and incubated at room temperature for 10 min.
T228 0-97 Sentence denotes The solutions were mixed by vortexing followed by centrifugation at 12,000 rpm for 15 min at 4°C.
T229 98-233 Sentence denotes The upper phase was transferred to a new tube followed by addition of 100 μl iso-propanol and incubated at room temperature for 10 min.