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PMC:2817507 / 7334-7749 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
20150961-17884182-67933706 97-98 17884182 denotes 8

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3605 406-414 NN denotes controls
T3604 397-405 JJ denotes negative
T3603 394-396 IN denotes as
T3602 387-393 VB denotes served
T3601 376-386 NN denotes antibodies
T3600 368-375 JJ denotes primary
T3599 360-367 IN denotes without
T3598 350-359 VB denotes processed
T3597 343-349 NN denotes Slides
T3596 340-341 -RRB- denotes )
T3595 338-340 NNP denotes CA
T3594 336-337 -COMMA- denotes ,
T3593 332-336 NNP denotes Cruz
T3592 326-331 NNP denotes Santa
T3591 325-326 -LRB- denotes (
T3590 320-324 NNP denotes Inc.
T3589 306-319 NNP denotes Biotechnology
T3588 301-305 NNP denotes Cruz
T3587 295-300 NNP denotes Santa
T3586 290-294 IN denotes from
T3585 281-289 VB denotes obtained
T3584 276-280 VB denotes were
T3583 274-275 -RRB- denotes )
T3582 267-274 NN denotes SC-2018
T3581 265-266 -COMMA- denotes ,
T3580 258-265 NN denotes reagent
T3579 254-257 NN denotes ABC
T3578 253-254 -LRB- denotes (
T3577 243-252 NN denotes complexes
T3576 209-242 JJ denotes antibody-biotin-avidin-peroxidase
T3575 205-208 CC denotes and
T3574 196-204 NN denotes antibody
T3573 186-195 JJ denotes secondary
T3572 173-185 VB denotes biotinylated
T3571 169-172 DT denotes The
T3570 166-167 -RRB- denotes )
T3569 160-166 NN denotes BA1717
T3568 158-159 -COMMA- denotes ,
T3567 153-158 NNP denotes WuHan
T3566 152-153 -LRB- denotes (
T3565 142-151 NN denotes anti-TLR4
T3564 135-141 NN denotes rabbit
T3563 131-134 VB denotes was
T3562 122-130 VB denotes employed
T3561 113-121 NN denotes antibody
T3560 105-112 JJ denotes primary
T3559 101-104 DT denotes The
T3558 98-99 -RRB- denotes ]
T3557 97-98 CD denotes 8
T3556 96-97 -LRB- denotes [
T3555 85-95 RB denotes previously
T3554 75-84 VB denotes described
T3553 72-74 IN denotes as
T3552 62-71 VB denotes performed
T3551 58-61 VB denotes was
T3550 53-57 NN denotes TLR4
T3549 49-52 IN denotes for
T3548 40-48 NN denotes staining
T3547 36-39 NN denotes IHC
T3546 32-35 DT denotes The
T3545 30-31 -RRB- denotes )
T3544 27-30 NN denotes IHC
T3543 26-27 -LRB- denotes (
T3542 5-25 NN denotes Immunohistochemistry
T3541 0-3 CD denotes 2.4
R2754 T3542 T3543 arg1Of Immunohistochemistry,(
R2755 T3544 T3543 arg2Of IHC,(
R2756 T3545 T3543 arg3Of ),(
R2757 T3548 T3546 arg1Of staining,The
R2758 T3548 T3547 arg1Of staining,IHC
R2759 T3548 T3549 arg1Of staining,for
R2760 T3548 T3551 arg1Of staining,was
R2761 T3548 T3552 arg2Of staining,performed
R2762 T3550 T3549 arg2Of TLR4,for
R2763 T3552 T3551 arg2Of performed,was
R2764 T3552 T3553 arg1Of performed,as
R2765 T3552 T3556 arg1Of performed,[
R2766 T3554 T3553 arg2Of described,as
R2767 T3554 T3555 arg1Of described,previously
R2768 T3557 T3556 arg2Of 8,[
R2769 T3558 T3556 arg3Of ],[
R2770 T3561 T3559 arg1Of antibody,The
R2771 T3561 T3560 arg1Of antibody,primary
R2772 T3561 T3562 arg2Of antibody,employed
R2773 T3561 T3563 arg1Of antibody,was
R2774 T3563 T3566 arg1Of was,(
R2775 T3565 T3563 arg2Of anti-TLR4,was
R2776 T3565 T3564 arg1Of anti-TLR4,rabbit
R2777 T3567 T3566 arg2Of WuHan,(
R2778 T3567 T3568 arg1Of WuHan,","
R2779 T3567 T3569 arg1Of WuHan,BA1717
R2780 T3570 T3566 arg3Of ),(
R2781 T3574 T3571 arg1Of antibody,The
R2782 T3574 T3572 arg2Of antibody,biotinylated
R2783 T3574 T3573 arg1Of antibody,secondary
R2784 T3574 T3575 arg1Of antibody,and
R2785 T3575 T3584 arg1Of and,were
R2786 T3575 T3585 arg2Of and,obtained
R2787 T3577 T3575 arg2Of complexes,and
R2788 T3577 T3576 arg1Of complexes,antibody-biotin-avidin-peroxidase
R2789 T3577 T3578 arg1Of complexes,(
R2790 T3580 T3578 arg2Of reagent,(
R2791 T3580 T3579 arg1Of reagent,ABC
R2792 T3580 T3581 arg1Of reagent,","
R2793 T3582 T3581 arg2Of SC-2018,","
R2794 T3583 T3578 arg3Of ),(
R2795 T3585 T3584 arg2Of obtained,were
R2796 T3585 T3586 arg1Of obtained,from
R2797 T3590 T3586 arg2Of Inc.,from
R2798 T3590 T3587 arg1Of Inc.,Santa
R2799 T3590 T3588 arg1Of Inc.,Cruz
R2800 T3590 T3589 arg1Of Inc.,Biotechnology
R2801 T3590 T3591 arg1Of Inc.,(
R2802 T3593 T3591 arg2Of Cruz,(
R2803 T3593 T3592 arg1Of Cruz,Santa
R2804 T3593 T3594 arg1Of Cruz,","
R2805 T3595 T3594 arg2Of CA,","
R2806 T3596 T3591 arg3Of ),(
R2807 T3597 T3598 arg2Of Slides,processed
R2808 T3598 T3599 arg1Of processed,without
R2809 T3601 T3599 arg2Of antibodies,without
R2810 T3601 T3600 arg1Of antibodies,primary
R2811 T3601 T3602 arg2Of antibodies,served
R2812 T3602 T3603 arg1Of served,as
R2813 T3605 T3603 arg2Of controls,as
R2814 T3605 T3604 arg1Of controls,negative

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3521 225-231 Protein denotes avidin
T3520 53-57 Protein denotes TLR4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3676 53-57 http://www.uniprot.org/uniprot/O00206 denotes TLR4
T3677 147-151 http://www.uniprot.org/uniprot/O00206 denotes TLR4

GO-BP

Id Subject Object Predicate Lexical cue
T3522 338-340 http://purl.obolibrary.org/obo/GO_0033968 denotes CA

GO-MF

Id Subject Object Predicate Lexical cue
T3527 338-340 http://purl.obolibrary.org/obo/GO_0033968 denotes CA
T3526 376-386 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T3525 209-217 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T3524 196-204 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T3523 113-121 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody

GO-CC

Id Subject Object Predicate Lexical cue
T3528 113-121 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T3535 376-386 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T3534 209-217 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T3533 196-204 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T3532 113-121 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T3531 376-386 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T3530 209-217 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T3529 196-204 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody

sentences

Id Subject Object Predicate Lexical cue
T3517 343-415 Sentence denotes Slides processed without primary antibodies served as negative controls.
T3516 169-342 Sentence denotes The biotinylated secondary antibody and antibody-biotin-avidin-peroxidase complexes (ABC reagent, SC-2018) were obtained from Santa Cruz Biotechnology Inc. (Santa Cruz, CA).
T3515 101-168 Sentence denotes The primary antibody employed was rabbit anti-TLR4 (WuHan, BA1717).
T3514 32-100 Sentence denotes The IHC staining for TLR4 was performed as described previously [8].
T3513 5-31 Sentence denotes Immunohistochemistry (IHC)
T3512 0-4 Sentence denotes 2.4.
T71 0-4 Sentence denotes 2.4.
T72 5-31 Sentence denotes Immunohistochemistry (IHC)
T73 32-100 Sentence denotes The IHC staining for TLR4 was performed as described previously [8].
T74 101-168 Sentence denotes The primary antibody employed was rabbit anti-TLR4 (WuHan, BA1717).
T75 169-342 Sentence denotes The biotinylated secondary antibody and antibody-biotin-avidin-peroxidase complexes (ABC reagent, SC-2018) were obtained from Santa Cruz Biotechnology Inc. (Santa Cruz, CA).
T76 343-415 Sentence denotes Slides processed without primary antibodies served as negative controls.

simple1

Id Subject Object Predicate Lexical cue
T3540 225-231 Protein denotes avidin
T3539 53-57 Protein denotes TLR4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T3690 225-231 Protein denotes avidin
T3689 53-57 Protein denotes TLR4

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T3679 225-231 Protein denotes avidin
T3678 53-57 Protein denotes TLR4

DLUT931

Id Subject Object Predicate Lexical cue
T3685 225-231 Protein denotes avidin
T3684 53-57 Protein denotes TLR4

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T3704 169-204 Protein_modification denotes The biotinylated secondary antibody
T3703 254-275 Entity denotes ABC reagent, SC-2018)
T3702 232-242 Protein denotes peroxidase
T3701 368-386 Entity denotes primary antibodies
T3700 53-57 Protein denotes TLR4
T3699 101-130 Protein denotes The primary antibody employed
T3698 135-167 Protein denotes rabbit anti-TLR4 (WuHan, BA1717)
T3697 209-252 Entity denotes antibody-biotin-avidin-peroxidase complexes
T3696 169-204 Protein denotes The biotinylated secondary antibody
T3695 343-414 Entity denotes Slides processed without primary antibodies served as negative controls
T3694 218-224 Entity denotes biotin
T3693 225-231 Protein denotes avidin
T3692 295-300 Protein denotes Santa
T3691 209-217 Entity denotes antibody
R2885 T3696 T3704 themeOf The biotinylated secondary antibody,The biotinylated secondary antibody

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3662 336-337 , denotes ,
T3661 332-336 NNP denotes Cruz
T3660 326-331 NNP denotes Santa
T3659 325-326 -LRB- denotes (
T3658 320-324 NNP denotes Inc.
T3657 306-319 NNP denotes Biotechnology
T3656 301-305 NNP denotes Cruz
T3655 295-300 NNP denotes Santa
T3654 290-294 IN denotes from
T3653 281-289 VBN denotes obtained
T3652 276-280 VBD denotes were
T3651 274-275 -RRB- denotes )
T3650 267-274 NN denotes SC-2018
T3649 265-266 , denotes ,
T3648 258-265 NN denotes reagent
T3647 254-257 NNP denotes ABC
T3646 253-254 -LRB- denotes (
T3645 243-252 NNS denotes complexes
T3644 209-242 JJ denotes antibody-biotin-avidin-peroxidase
T3643 205-208 CC denotes and
T3642 196-204 NN denotes antibody
T3641 186-195 JJ denotes secondary
T3640 173-185 JJ denotes biotinylated
T3639 169-172 DT denotes The
T3638 167-168 . denotes .
T3637 166-167 -RRB- denotes )
T3636 160-166 NNP denotes BA1717
T3635 158-159 , denotes ,
T3634 153-158 JJ denotes WuHan
T3633 152-153 -LRB- denotes (
T3632 142-151 NN denotes anti-TLR4
T3631 135-141 NN denotes rabbit
T3630 131-134 VBD denotes was
T3629 122-130 VBN denotes employed
T3628 113-121 NN denotes antibody
T3627 105-112 JJ denotes primary
T3626 101-104 DT denotes The
T3625 99-100 . denotes .
T3624 98-99 NN denotes ]
T3623 97-98 CD denotes 8
T3622 96-97 JJ denotes [
T3621 85-95 RB denotes previously
T3620 75-84 VBN denotes described
T3619 72-74 IN denotes as
T3618 62-71 VBN denotes performed
T3617 58-61 VBD denotes was
T3616 53-57 CD denotes TLR4
T3615 49-52 IN denotes for
T3614 40-48 VBG denotes staining
T3613 36-39 NNP denotes IHC
T3612 32-35 DT denotes The
T3611 30-31 -RRB- denotes )
T3610 27-30 NNP denotes IHC
T3609 26-27 -LRB- denotes (
T3608 5-25 NNP denotes Immunohistochemistry
T3607 3-4 . denotes .
T3606 0-3 CD denotes 2.4
T3675 414-415 . denotes .
T3674 406-414 NNS denotes controls
T3673 397-405 JJ denotes negative
T3672 394-396 IN denotes as
T3671 387-393 VBD denotes served
T3670 376-386 NNS denotes antibodies
T3669 368-375 JJ denotes primary
T3668 360-367 IN denotes without
T3667 350-359 VBN denotes processed
T3666 343-349 NNS denotes Slides
T3665 341-342 . denotes .
T3664 340-341 -RRB- denotes )
T3663 338-340 NNP denotes CA
R2815 T3606 T3606 ROOT 2.4,2.4
R2816 T3607 T3606 punct .,2.4
R2817 T3608 T3608 ROOT Immunohistochemistry,Immunohistochemistry
R2818 T3609 T3610 punct (,IHC
R2819 T3610 T3608 appos IHC,Immunohistochemistry
R2820 T3611 T3608 punct ),Immunohistochemistry
R2821 T3612 T3613 det The,IHC
R2822 T3613 T3618 nsubjpass IHC,performed
R2823 T3614 T3613 acl staining,IHC
R2824 T3615 T3614 prep for,staining
R2825 T3616 T3615 pobj TLR4,for
R2826 T3617 T3618 auxpass was,performed
R2827 T3618 T3618 ROOT performed,performed
R2828 T3619 T3620 mark as,described
R2829 T3620 T3618 advcl described,performed
R2830 T3621 T3622 advmod previously,[
R2831 T3622 T3624 amod [,]
R2832 T3623 T3624 nummod 8,]
R2833 T3624 T3620 dobj ],described
R2834 T3625 T3618 punct .,performed
R2835 T3626 T3628 det The,antibody
R2836 T3627 T3628 amod primary,antibody
R2837 T3628 T3630 nsubj antibody,was
R2838 T3629 T3628 acl employed,antibody
R2839 T3630 T3630 ROOT was,was
R2840 T3631 T3632 compound rabbit,anti-TLR4
R2841 T3632 T3630 attr anti-TLR4,was
R2842 T3633 T3636 punct (,BA1717
R2843 T3634 T3636 amod WuHan,BA1717
R2844 T3635 T3636 punct ",",BA1717
R2845 T3636 T3632 appos BA1717,anti-TLR4
R2846 T3637 T3636 punct ),BA1717
R2847 T3638 T3630 punct .,was
R2848 T3639 T3642 det The,antibody
R2849 T3640 T3642 amod biotinylated,antibody
R2850 T3641 T3642 amod secondary,antibody
R2851 T3642 T3653 nsubjpass antibody,obtained
R2852 T3643 T3642 cc and,antibody
R2853 T3644 T3645 amod antibody-biotin-avidin-peroxidase,complexes
R2854 T3645 T3642 conj complexes,antibody
R2855 T3646 T3648 punct (,reagent
R2856 T3647 T3648 compound ABC,reagent
R2857 T3648 T3645 appos reagent,complexes
R2858 T3649 T3648 punct ",",reagent
R2859 T3650 T3648 appos SC-2018,reagent
R2860 T3651 T3648 punct ),reagent
R2861 T3652 T3653 auxpass were,obtained
R2862 T3653 T3653 ROOT obtained,obtained
R2863 T3654 T3653 prep from,obtained
R2864 T3655 T3658 compound Santa,Inc.
R2865 T3656 T3658 compound Cruz,Inc.
R2866 T3657 T3658 compound Biotechnology,Inc.
R2867 T3658 T3654 pobj Inc.,from
R2868 T3659 T3658 punct (,Inc.
R2869 T3660 T3661 compound Santa,Cruz
R2870 T3661 T3658 npadvmod Cruz,Inc.
R2871 T3662 T3661 punct ",",Cruz
R2872 T3663 T3661 appos CA,Cruz
R2873 T3664 T3658 punct ),Inc.
R2874 T3665 T3653 punct .,obtained
R2875 T3666 T3667 nsubj Slides,processed
R2876 T3667 T3671 csubj processed,served
R2877 T3668 T3667 prep without,processed
R2878 T3669 T3670 amod primary,antibodies
R2879 T3670 T3668 pobj antibodies,without
R2880 T3671 T3671 ROOT served,served
R2881 T3672 T3671 prep as,served
R2882 T3673 T3674 amod negative,controls
R2883 T3674 T3672 pobj controls,as
R2884 T3675 T3671 punct .,served

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3538 232-242 Protein denotes peroxidase
T3537 225-231 Protein denotes avidin
T3536 53-57 Protein denotes TLR4

testone

Id Subject Object Predicate Lexical cue
T3507 225-231 Protein denotes avidin
T3506 53-57 Protein denotes TLR4

test3

Id Subject Object Predicate Lexical cue
T3511 225-231 Protein denotes avidin
T3510 53-57 Protein denotes TLR4
T3509 225-231 Protein denotes avidin
T3508 53-57 Protein denotes TLR4