PMC:2806624 / 55947-56220
Annnotations
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T26846","span":{"begin":0,"end":8},"obj":"JJ"},{"id":"T26847","span":{"begin":9,"end":16},"obj":"NNS"},{"id":"T26848","span":{"begin":17,"end":20},"obj":"IN"},{"id":"T26849","span":{"begin":21,"end":24},"obj":"DT"},{"id":"T26850","span":{"begin":25,"end":30},"obj":"CD"},{"id":"T26851","span":{"begin":31,"end":39},"obj":"NN"},{"id":"T26852","span":{"begin":39,"end":40},"obj":","},{"id":"T26853","span":{"begin":41,"end":49},"obj":"VBG"},{"id":"T26854","span":{"begin":50,"end":53},"obj":"DT"},{"id":"T26855","span":{"begin":54,"end":60},"obj":"NN"},{"id":"T26856","span":{"begin":61,"end":65},"obj":"IN"},{"id":"T26857","span":{"begin":66,"end":67},"obj":"CD"},{"id":"T26858","span":{"begin":67,"end":69},"obj":"CD"},{"id":"T26859","span":{"begin":70,"end":72},"obj":"TO"},{"id":"T26860","span":{"begin":73,"end":74},"obj":"CD"},{"id":"T26861","span":{"begin":74,"end":75},"obj":"CD"},{"id":"T26862","span":{"begin":75,"end":76},"obj":","},{"id":"T26863","span":{"begin":77,"end":82},"obj":"CD"},{"id":"T26864","span":{"begin":83,"end":91},"obj":"NN"},{"id":"T26865","span":{"begin":92,"end":99},"obj":"RB"},{"id":"T26866","span":{"begin":100,"end":106},"obj":"JJR"},{"id":"T26867","span":{"begin":107,"end":108},"obj":"CD"},{"id":"T26868","span":{"begin":108,"end":109},"obj":"SYM"},{"id":"T26869","span":{"begin":109,"end":110},"obj":":"},{"id":"T26870","span":{"begin":110,"end":130},"obj":"NN"},{"id":"T26871","span":{"begin":130,"end":131},"obj":"NN"},{"id":"T26872","span":{"begin":131,"end":132},"obj":","},{"id":"T26873","span":{"begin":133,"end":138},"obj":"CD"},{"id":"T26874","span":{"begin":139,"end":147},"obj":"NN"},{"id":"T26875","span":{"begin":148,"end":155},"obj":"NN"},{"id":"T26876","span":{"begin":156,"end":162},"obj":"NN"},{"id":"T26877","span":{"begin":163,"end":164},"obj":"CD"},{"id":"T26878","span":{"begin":164,"end":165},"obj":"SYM"},{"id":"T26879","span":{"begin":165,"end":166},"obj":":"},{"id":"T26880","span":{"begin":166,"end":193},"obj":"NN"},{"id":"T26881","span":{"begin":193,"end":194},"obj":"NN"},{"id":"T26882","span":{"begin":194,"end":195},"obj":","},{"id":"T26883","span":{"begin":196,"end":198},"obj":"CC"},{"id":"T26884","span":{"begin":199,"end":206},"obj":"NN"},{"id":"T26885","span":{"begin":207,"end":212},"obj":"NNP"},{"id":"T26886","span":{"begin":213,"end":219},"obj":"NN"},{"id":"T26887","span":{"begin":220,"end":221},"obj":"-LRB-"},{"id":"T26888","span":{"begin":221,"end":223},"obj":"NNP"},{"id":"T26889","span":{"begin":224,"end":235},"obj":"NNPS"},{"id":"T26890","span":{"begin":235,"end":236},"obj":"-RRB-"},{"id":"T26891","span":{"begin":237,"end":240},"obj":"IN"},{"id":"T26892","span":{"begin":241,"end":244},"obj":"DT"},{"id":"T26893","span":{"begin":245,"end":248},"obj":"NNP"},{"id":"T26894","span":{"begin":249,"end":259},"obj":"NN"},{"id":"T26895","span":{"begin":260,"end":262},"obj":"NNP"},{"id":"T26896","span":{"begin":263,"end":267},"obj":"VBD"},{"id":"T26897","span":{"begin":268,"end":272},"obj":"VBN"},{"id":"T26898","span":{"begin":272,"end":273},"obj":"."}],"relations":[{"id":"R20996","pred":"amod","subj":"T26846","obj":"T26847"},{"id":"R20997","pred":"nsubjpass","subj":"T26847","obj":"T26897"},{"id":"R20998","pred":"prep","subj":"T26848","obj":"T26847"},{"id":"R20999","pred":"det","subj":"T26849","obj":"T26851"},{"id":"R21000","pred":"nummod","subj":"T26850","obj":"T26851"},{"id":"R21001","pred":"pobj","subj":"T26851","obj":"T26848"},{"id":"R21002","pred":"punct","subj":"T26852","obj":"T26897"},{"id":"R21003","pred":"advcl","subj":"T26853","obj":"T26897"},{"id":"R21004","pred":"det","subj":"T26854","obj":"T26855"},{"id":"R21005","pred":"dobj","subj":"T26855","obj":"T26853"},{"id":"R21006","pred":"prep","subj":"T26856","obj":"T26853"},{"id":"R21007","pred":"pobj","subj":"T26857","obj":"T26856"},{"id":"R21008","pred":"meta","subj":"T26858","obj":"T26866"},{"id":"R21009","pred":"cc","subj":"T26859","obj":"T26866"},{"id":"R21010","pred":"dep","subj":"T26860","obj":"T26866"},{"id":"R21011","pred":"appos","subj":"T26861","obj":"T26860"},{"id":"R21012","pred":"punct","subj":"T26862","obj":"T26866"},{"id":"R21013","pred":"nummod","subj":"T26863","obj":"T26864"},{"id":"R21014","pred":"npadvmod","subj":"T26864","obj":"T26866"},{"id":"R21015","pred":"advmod","subj":"T26865","obj":"T26866"},{"id":"R21016","pred":"advcl","subj":"T26866","obj":"T26897"},{"id":"R21017","pred":"nummod","subj":"T26867","obj":"T26871"},{"id":"R21018","pred":"punct","subj":"T26868","obj":"T26870"},{"id":"R21019","pred":"punct","subj":"T26869","obj":"T26870"},{"id":"R21020","pred":"compound","subj":"T26870","obj":"T26871"},{"id":"R21021","pred":"appos","subj":"T26871","obj":"T26866"},{"id":"R21022","pred":"punct","subj":"T26872","obj":"T26871"},{"id":"R21023","pred":"nummod","subj":"T26873","obj":"T26876"},{"id":"R21024","pred":"compound","subj":"T26874","obj":"T26876"},{"id":"R21025","pred":"compound","subj":"T26875","obj":"T26876"},{"id":"R21026","pred":"nsubjpass","subj":"T26876","obj":"T26897"},{"id":"R21027","pred":"nummod","subj":"T26877","obj":"T26881"},{"id":"R21028","pred":"punct","subj":"T26878","obj":"T26880"},{"id":"R21029","pred":"punct","subj":"T26879","obj":"T26880"},{"id":"R21030","pred":"compound","subj":"T26880","obj":"T26881"},{"id":"R21031","pred":"appos","subj":"T26881","obj":"T26876"},{"id":"R21032","pred":"punct","subj":"T26882","obj":"T26881"},{"id":"R21033","pred":"cc","subj":"T26883","obj":"T26881"},{"id":"R21034","pred":"conj","subj":"T26884","obj":"T26881"},{"id":"R21035","pred":"compound","subj":"T26885","obj":"T26886"},{"id":"R21036","pred":"nsubjpass","subj":"T26886","obj":"T26897"},{"id":"R21037","pred":"punct","subj":"T26887","obj":"T26889"},{"id":"R21038","pred":"compound","subj":"T26888","obj":"T26889"},{"id":"R21039","pred":"appos","subj":"T26889","obj":"T26886"},{"id":"R21040","pred":"punct","subj":"T26890","obj":"T26886"},{"id":"R21041","pred":"prep","subj":"T26891","obj":"T26886"},{"id":"R21042","pred":"det","subj":"T26892","obj":"T26895"},{"id":"R21043","pred":"compound","subj":"T26893","obj":"T26894"},{"id":"R21044","pred":"compound","subj":"T26894","obj":"T26895"},{"id":"R21045","pred":"pobj","subj":"T26895","obj":"T26891"},{"id":"R21046","pred":"auxpass","subj":"T26896","obj":"T26897"},{"id":"R21047","pred":"ROOT","subj":"T26897","obj":"T26897"},{"id":"R21048","pred":"punct","subj":"T26898","obj":"T26897"}],"text":"Specific primers for the FOXP3 promoter, spanning the region from −87 to −3, FOXP3 promoter forward primer 5′-AGAGGTCTGCGGCTTCCA-3′, FOXP3 promoter reverse primer 5′-GGAAACTGTCACGTATCAAAAACAA-3′, or control GAPDH primer (SA Biosciences) for the RNA polymerase II were used."}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T26952","span":{"begin":245,"end":262},"obj":"http://purl.obolibrary.org/obo/GO_1990114"},{"id":"T26973","span":{"begin":245,"end":262},"obj":"http://purl.obolibrary.org/obo/GO_0001055"},{"id":"T26975","span":{"begin":245,"end":262},"obj":"http://purl.obolibrary.org/obo/GO_0003899"}],"text":"Specific primers for the FOXP3 promoter, spanning the region from −87 to −3, FOXP3 promoter forward primer 5′-AGAGGTCTGCGGCTTCCA-3′, FOXP3 promoter reverse primer 5′-GGAAACTGTCACGTATCAAAAACAA-3′, or control GAPDH primer (SA Biosciences) for the RNA polymerase II were used."}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T26984","span":{"begin":245,"end":262},"obj":"http://purl.obolibrary.org/obo/GO_0001055"},{"id":"T26986","span":{"begin":245,"end":262},"obj":"http://purl.obolibrary.org/obo/GO_0003899"}],"text":"Specific primers for the FOXP3 promoter, spanning the region from −87 to −3, FOXP3 promoter forward primer 5′-AGAGGTCTGCGGCTTCCA-3′, FOXP3 promoter reverse primer 5′-GGAAACTGTCACGTATCAAAAACAA-3′, or control GAPDH primer (SA Biosciences) for the RNA polymerase II were used."}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T27002","span":{"begin":245,"end":262},"obj":"http://purl.obolibrary.org/obo/GO_0005665"}],"text":"Specific primers for the FOXP3 promoter, spanning the region from −87 to −3, FOXP3 promoter forward primer 5′-AGAGGTCTGCGGCTTCCA-3′, FOXP3 promoter reverse primer 5′-GGAAACTGTCACGTATCAAAAACAA-3′, or control GAPDH primer (SA Biosciences) for the RNA polymerase II were used."}
sentences
{"project":"sentences","denotations":[{"id":"T26534","span":{"begin":0,"end":273},"obj":"Sentence"},{"id":"T384","span":{"begin":0,"end":273},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Specific primers for the FOXP3 promoter, spanning the region from −87 to −3, FOXP3 promoter forward primer 5′-AGAGGTCTGCGGCTTCCA-3′, FOXP3 promoter reverse primer 5′-GGAAACTGTCACGTATCAAAAACAA-3′, or control GAPDH primer (SA Biosciences) for the RNA polymerase II were used."}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T27053","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T27054","span":{"begin":77,"end":82},"obj":"Protein"},{"id":"T27055","span":{"begin":133,"end":138},"obj":"Protein"},{"id":"T27056","span":{"begin":207,"end":212},"obj":"Protein"},{"id":"T27057","span":{"begin":245,"end":262},"obj":"Protein"}],"text":"Specific primers for the FOXP3 promoter, spanning the region from −87 to −3, FOXP3 promoter forward primer 5′-AGAGGTCTGCGGCTTCCA-3′, FOXP3 promoter reverse primer 5′-GGAAACTGTCACGTATCAAAAACAA-3′, or control GAPDH primer (SA Biosciences) for the RNA polymerase II were used."}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T27015","span":{"begin":25,"end":39},"obj":"Protein"},{"id":"T27016","span":{"begin":133,"end":147},"obj":"Protein"},{"id":"T27017","span":{"begin":207,"end":212},"obj":"Protein"},{"id":"T27018","span":{"begin":245,"end":262},"obj":"Protein"}],"text":"Specific primers for the FOXP3 promoter, spanning the region from −87 to −3, FOXP3 promoter forward primer 5′-AGAGGTCTGCGGCTTCCA-3′, FOXP3 promoter reverse primer 5′-GGAAACTGTCACGTATCAAAAACAA-3′, or control GAPDH primer (SA Biosciences) for the RNA polymerase II were used."}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T26520","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T26521","span":{"begin":77,"end":82},"obj":"Protein"},{"id":"T26522","span":{"begin":133,"end":138},"obj":"Protein"},{"id":"T26523","span":{"begin":207,"end":212},"obj":"Protein"},{"id":"T26524","span":{"begin":245,"end":262},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Specific primers for the FOXP3 promoter, spanning the region from −87 to −3, FOXP3 promoter forward primer 5′-AGAGGTCTGCGGCTTCCA-3′, FOXP3 promoter reverse primer 5′-GGAAACTGTCACGTATCAAAAACAA-3′, or control GAPDH primer (SA Biosciences) for the RNA polymerase II were used."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T26546","span":{"begin":25,"end":30},"obj":"Q9BZS1"},{"id":"T26547","span":{"begin":77,"end":82},"obj":"Q9BZS1"},{"id":"T26548","span":{"begin":133,"end":138},"obj":"Q9BZS1"},{"id":"T26549","span":{"begin":207,"end":212},"obj":"P04406"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Specific primers for the FOXP3 promoter, spanning the region from −87 to −3, FOXP3 promoter forward primer 5′-AGAGGTCTGCGGCTTCCA-3′, FOXP3 promoter reverse primer 5′-GGAAACTGTCACGTATCAAAAACAA-3′, or control GAPDH primer (SA Biosciences) for the RNA polymerase II were used."}
test2
{"project":"test2","denotations":[{"id":"T26501","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T26502","span":{"begin":77,"end":82},"obj":"Protein"},{"id":"T26503","span":{"begin":133,"end":138},"obj":"Protein"},{"id":"T26504","span":{"begin":207,"end":212},"obj":"Protein"},{"id":"T26505","span":{"begin":245,"end":262},"obj":"Protein"}],"text":"Specific primers for the FOXP3 promoter, spanning the region from −87 to −3, FOXP3 promoter forward primer 5′-AGAGGTCTGCGGCTTCCA-3′, FOXP3 promoter reverse primer 5′-GGAAACTGTCACGTATCAAAAACAA-3′, or control GAPDH primer (SA Biosciences) for the RNA polymerase II were used."}