PMC:2806624 / 488-624
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T291 | 0-4 | DT | denotes | This |
T292 | 5-14 | NN | denotes | induction |
T293 | 15-20 | VB | denotes | seems |
T294 | 21-23 | TO | denotes | to |
T295 | 24-26 | VB | denotes | be |
T296 | 27-28 | DT | denotes | a |
T297 | 29-41 | NN | denotes | prerequisite |
T298 | 42-45 | IN | denotes | for |
T299 | 46-49 | DT | denotes | the |
T300 | 50-57 | NN | denotes | binding |
T301 | 58-60 | IN | denotes | of |
T302 | 61-66 | NN | denotes | RUNX1 |
T303 | 67-70 | CC | denotes | and |
T304 | 71-76 | NN | denotes | RUNX3 |
T305 | 77-79 | TO | denotes | to |
T306 | 80-85 | CD | denotes | three |
T307 | 86-94 | JJ | denotes | putative |
T308 | 95-99 | NN | denotes | RUNX |
T309 | 100-107 | NN | denotes | binding |
T310 | 108-113 | NN | denotes | sites |
T311 | 114-116 | IN | denotes | in |
T312 | 117-120 | DT | denotes | the |
T313 | 121-126 | NN | denotes | FOXP3 |
T314 | 127-135 | NN | denotes | promoter |
R149 | T292 | T291 | arg1Of | induction,This |
R150 | T292 | T293 | arg1Of | induction,seems |
R151 | T292 | T295 | arg1Of | induction,be |
R152 | T295 | T293 | arg2Of | be,seems |
R153 | T295 | T294 | arg1Of | be,to |
R154 | T297 | T295 | arg2Of | prerequisite,be |
R155 | T297 | T296 | arg1Of | prerequisite,a |
R156 | T297 | T298 | arg1Of | prerequisite,for |
R157 | T300 | T298 | arg2Of | binding,for |
R158 | T300 | T299 | arg1Of | binding,the |
R159 | T300 | T301 | arg1Of | binding,of |
R160 | T300 | T305 | arg1Of | binding,to |
R161 | T302 | T303 | arg1Of | RUNX1,and |
R162 | T303 | T301 | arg2Of | and,of |
R163 | T304 | T303 | arg2Of | RUNX3,and |
R164 | T310 | T305 | arg2Of | sites,to |
R165 | T310 | T306 | arg1Of | sites,three |
R166 | T310 | T307 | arg1Of | sites,putative |
R167 | T310 | T308 | arg1Of | sites,RUNX |
R168 | T310 | T309 | arg1Of | sites,binding |
R169 | T310 | T311 | arg1Of | sites,in |
R170 | T314 | T311 | arg2Of | promoter,in |
R171 | T314 | T312 | arg1Of | promoter,the |
R172 | T314 | T313 | arg1Of | promoter,FOXP3 |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T599 | 0-4 | DT | denotes | This |
T600 | 5-14 | NN | denotes | induction |
T601 | 15-20 | VBZ | denotes | seems |
T602 | 21-23 | TO | denotes | to |
T603 | 24-26 | VB | denotes | be |
T604 | 27-28 | DT | denotes | a |
T605 | 29-41 | NN | denotes | prerequisite |
T606 | 42-45 | IN | denotes | for |
T607 | 46-49 | DT | denotes | the |
T608 | 50-57 | JJ | denotes | binding |
T609 | 58-60 | IN | denotes | of |
T610 | 61-66 | CD | denotes | RUNX1 |
T611 | 67-70 | CC | denotes | and |
T612 | 71-76 | CD | denotes | RUNX3 |
T613 | 77-79 | TO | denotes | to |
T614 | 80-85 | CD | denotes | three |
T615 | 86-94 | JJ | denotes | putative |
T616 | 95-99 | NNP | denotes | RUNX |
T617 | 100-107 | JJ | denotes | binding |
T618 | 108-113 | NNS | denotes | sites |
T619 | 114-116 | IN | denotes | in |
T620 | 117-120 | DT | denotes | the |
T621 | 121-126 | CD | denotes | FOXP3 |
T622 | 127-135 | NN | denotes | promoter |
T623 | 135-136 | . | denotes | . |
R394 | T599 | T600 | det | This,induction |
R395 | T600 | T601 | nsubj | induction,seems |
R396 | T601 | T601 | ROOT | seems,seems |
R397 | T602 | T603 | aux | to,be |
R398 | T603 | T601 | xcomp | be,seems |
R399 | T604 | T605 | det | a,prerequisite |
R400 | T605 | T603 | attr | prerequisite,be |
R401 | T606 | T605 | prep | for,prerequisite |
R402 | T607 | T608 | det | the,binding |
R403 | T608 | T606 | pobj | binding,for |
R404 | T609 | T608 | prep | of,binding |
R405 | T610 | T618 | nummod | RUNX1,sites |
R406 | T611 | T610 | cc | and,RUNX1 |
R407 | T612 | T614 | nummod | RUNX3,three |
R408 | T613 | T614 | nmod | to,three |
R409 | T614 | T610 | conj | three,RUNX1 |
R410 | T615 | T618 | amod | putative,sites |
R411 | T616 | T618 | nmod | RUNX,sites |
R412 | T617 | T618 | amod | binding,sites |
R413 | T618 | T609 | pobj | sites,of |
R414 | T619 | T618 | prep | in,sites |
R415 | T620 | T622 | det | the,promoter |
R416 | T621 | T622 | nummod | FOXP3,promoter |
R417 | T622 | T619 | pobj | promoter,in |
R418 | T623 | T601 | punct | .,seems |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T869 | 50-57 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
T870 | 100-107 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T141 | 0-136 | Sentence | denotes | This induction seems to be a prerequisite for the binding of RUNX1 and RUNX3 to three putative RUNX binding sites in the FOXP3 promoter. |
T5 | 0-136 | Sentence | denotes | This induction seems to be a prerequisite for the binding of RUNX1 and RUNX3 to three putative RUNX binding sites in the FOXP3 promoter. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T976 | 29-41 | Positive_regulation | denotes | prerequisite | true |
T977 | 29-41 | Positive_regulation | denotes | prerequisite | true |
T978 | 50-57 | Binding | denotes | binding | |
T979 | 50-57 | Binding | denotes | binding | |
T980 | 61-66 | Protein | denotes | RUNX1 | |
T981 | 71-76 | Protein | denotes | RUNX3 | |
T982 | 95-113 | Entity | denotes | RUNX binding sites | |
T983 | 121-126 | Protein | denotes | FOXP3 | |
R675 | T978 | T976 | themeOf | binding,prerequisite | |
R676 | T979 | T977 | themeOf | binding,prerequisite | |
R677 | T980 | T978 | themeOf | RUNX1,binding | |
R678 | T981 | T979 | themeOf | RUNX3,binding | |
R679 | T982 | T978 | themeOf | RUNX binding sites,binding | |
R680 | T982 | T983 | partOf | RUNX binding sites,FOXP3 | |
R681 | T982 | T979 | themeOf | RUNX binding sites,binding |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T170 | 29-41 | Positive_regulation | denotes | prerequisite | true |
T171 | 50-57 | Binding | denotes | binding | |
T172 | 29-41 | Positive_regulation | denotes | prerequisite | true |
T173 | 50-57 | Binding | denotes | binding | |
T179 | 61-66 | Protein | denotes | RUNX1 | |
T215 | 95-113 | Entity | denotes | RUNX binding sites | |
T180 | 71-76 | Protein | denotes | RUNX3 | |
T181 | 121-126 | Protein | denotes | FOXP3 | |
R61 | T171 | T170 | themeOf | binding,prerequisite | |
R62 | T173 | T172 | themeOf | binding,prerequisite | |
R66 | T179 | T171 | themeOf | RUNX1,binding | |
R74 | T215 | T171 | themeOf | RUNX binding sites,binding | |
R75 | T215 | T181 | partOf | RUNX binding sites,FOXP3 | |
R76 | T215 | T173 | themeOf | RUNX binding sites,binding | |
R733 | T180 | T173 | themeOf | RUNX3,binding |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T475 | 61-66 | Q01196 | denotes | RUNX1 |
T476 | 71-76 | Q13761 | denotes | RUNX3 |
T477 | 95-99 | Q01196 | denotes | RUNX |
T478 | 95-99 | Q13761 | denotes | RUNX |
T479 | 95-99 | Q13950 | denotes | RUNX |
T480 | 121-126 | Q9BZS1 | denotes | FOXP3 |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T89 | 29-41 | Positive_regulation | denotes | prerequisite |
T90 | 50-57 | Binding | denotes | binding |
T91 | 61-66 | Protein | denotes | RUNX1 |
T92 | 71-76 | Protein | denotes | RUNX3 |
T93 | 95-113 | Entity | denotes | RUNX binding sites |
T94 | 121-126 | Protein | denotes | FOXP3 |
R719 | T93 | T90 | themeOf | RUNX binding sites,binding |
R720 | T93 | T94 | partOf | RUNX binding sites,FOXP3 |
R716 | T90 | T89 | themeOf | binding,prerequisite |
R717 | T91 | T90 | themeOf | RUNX1,binding |
R718 | T92 | T90 | themeOf | RUNX3,binding |