PMC:2806624 / 2626-2866
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1482 | 0-2 | PRP | denotes | It |
T1483 | 3-5 | VB | denotes | is |
T1484 | 6-11 | VB | denotes | known |
T1485 | 12-16 | IN | denotes | that |
T1486 | 17-22 | NN | denotes | Foxp3 |
T1487 | 23-33 | VB | denotes | cooperates |
T1488 | 34-38 | IN | denotes | with |
T1489 | 39-42 | DT | denotes | the |
T1490 | 43-50 | JJ | denotes | nuclear |
T1491 | 51-57 | NN | denotes | factor |
T1492 | 58-60 | IN | denotes | of |
T1493 | 61-70 | VB | denotes | activated |
T1494 | 71-72 | NN | denotes | T |
T1495 | 73-78 | NN | denotes | cells |
T1496 | 79-80 | -LRB- | denotes | ( |
T1497 | 80-84 | NN | denotes | NFAT |
T1498 | 84-85 | -RRB- | denotes | ) |
T1499 | 86-88 | CC | denotes | or |
T1500 | 89-96 | JJ | denotes | nuclear |
T1501 | 97-109 | NN | denotes | factor-kappa |
T1502 | 110-111 | NN | denotes | B |
T1503 | 112-113 | -LRB- | denotes | ( |
T1504 | 113-118 | NN | denotes | NF-κB |
T1505 | 118-119 | -RRB- | denotes | ) |
T1506 | 120-122 | TO | denotes | to |
T1507 | 123-131 | VB | denotes | regulate |
T1508 | 132-135 | DT | denotes | the |
T1509 | 136-149 | NN | denotes | transcription |
T1510 | 150-152 | IN | denotes | of |
T1511 | 153-162 | JJ | denotes | different |
T1512 | 163-169 | NN | denotes | target |
T1513 | 170-175 | NN | denotes | genes |
T1514 | 176-177 | -LRB- | denotes | ( |
T1515 | 177-185 | NNP | denotes | Schubert |
T1516 | 186-188 | FW | denotes | et |
T1517 | 189-192 | FW | denotes | al. |
T1518 | 192-193 | -COMMA- | denotes | , |
T1519 | 194-198 | CD | denotes | 2001 |
T1520 | 198-199 | -COLON- | denotes | ; |
T1521 | 200-208 | NNP | denotes | Bettelli |
T1522 | 209-211 | FW | denotes | et |
T1523 | 212-215 | FW | denotes | al. |
T1524 | 215-216 | -COMMA- | denotes | , |
T1525 | 217-221 | CD | denotes | 2005 |
T1526 | 221-222 | -COLON- | denotes | ; |
T1527 | 223-225 | NNP | denotes | Wu |
T1528 | 226-228 | FW | denotes | et |
T1529 | 229-232 | FW | denotes | al. |
T1530 | 232-233 | -COMMA- | denotes | , |
T1531 | 234-238 | CD | denotes | 2006 |
T1532 | 238-239 | -RRB- | denotes | ) |
R1067 | T1482 | T1483 | arg1Of | It,is |
R1068 | T1482 | T1484 | arg2Of | It,known |
R1069 | T1484 | T1483 | arg2Of | known,is |
R1070 | T1486 | T1487 | arg1Of | Foxp3,cooperates |
R1071 | T1487 | T1484 | arg3Of | cooperates,known |
R1072 | T1487 | T1485 | arg1Of | cooperates,that |
R1073 | T1487 | T1488 | arg1Of | cooperates,with |
R1074 | T1495 | T1490 | arg1Of | cells,nuclear |
R1075 | T1495 | T1491 | arg1Of | cells,factor |
R1076 | T1495 | T1492 | arg1Of | cells,of |
R1077 | T1495 | T1493 | arg2Of | cells,activated |
R1078 | T1495 | T1494 | arg1Of | cells,T |
R1079 | T1495 | T1496 | arg1Of | cells,( |
R1080 | T1495 | T1499 | arg1Of | cells,or |
R1081 | T1497 | T1496 | arg2Of | NFAT,( |
R1082 | T1498 | T1496 | arg3Of | ),( |
R1083 | T1499 | T1488 | arg2Of | or,with |
R1084 | T1499 | T1489 | arg1Of | or,the |
R1085 | T1502 | T1499 | arg2Of | B,or |
R1086 | T1502 | T1500 | arg1Of | B,nuclear |
R1087 | T1502 | T1501 | arg1Of | B,factor-kappa |
R1088 | T1502 | T1503 | arg1Of | B,( |
R1089 | T1502 | T1506 | modOf | B,to |
R1090 | T1504 | T1503 | arg2Of | NF-κB,( |
R1091 | T1505 | T1503 | arg3Of | ),( |
R1092 | T1507 | T1506 | arg1Of | regulate,to |
R1093 | T1509 | T1507 | arg2Of | transcription,regulate |
R1094 | T1509 | T1508 | arg1Of | transcription,the |
R1095 | T1509 | T1510 | arg1Of | transcription,of |
R1096 | T1513 | T1510 | arg2Of | genes,of |
R1097 | T1513 | T1511 | arg1Of | genes,different |
R1098 | T1513 | T1512 | arg1Of | genes,target |
R1099 | T1513 | T1514 | arg1Of | genes,( |
R1100 | T1515 | T1514 | arg2Of | Schubert,( |
R1101 | T1515 | T1516 | arg1Of | Schubert,et |
R1102 | T1515 | T1517 | arg1Of | Schubert,al. |
R1103 | T1515 | T1518 | arg1Of | Schubert,"," |
R1104 | T1515 | T1520 | arg1Of | Schubert,; |
R1105 | T1515 | T1526 | arg1Of | Schubert,; |
R1106 | T1519 | T1518 | arg2Of | 2001,"," |
R1107 | T1521 | T1520 | arg2Of | Bettelli,; |
R1108 | T1521 | T1522 | arg1Of | Bettelli,et |
R1109 | T1521 | T1523 | arg1Of | Bettelli,al. |
R1110 | T1521 | T1524 | arg1Of | Bettelli,"," |
R1111 | T1525 | T1524 | arg2Of | 2005,"," |
R1112 | T1527 | T1526 | arg2Of | Wu,; |
R1113 | T1527 | T1528 | arg1Of | Wu,et |
R1114 | T1527 | T1529 | arg1Of | Wu,al. |
R1115 | T1527 | T1530 | arg1Of | Wu,"," |
R1116 | T1531 | T1530 | arg2Of | 2006,"," |
R1117 | T1532 | T1514 | arg3Of | ),( |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2305 | 0-2 | PRP | denotes | It |
T2306 | 3-5 | VBZ | denotes | is |
T2307 | 6-11 | VBN | denotes | known |
T2308 | 12-16 | IN | denotes | that |
T2309 | 17-22 | JJ | denotes | Foxp3 |
T2310 | 23-33 | NNS | denotes | cooperates |
T2311 | 34-38 | IN | denotes | with |
T2312 | 39-42 | DT | denotes | the |
T2313 | 43-50 | JJ | denotes | nuclear |
T2314 | 51-57 | NN | denotes | factor |
T2315 | 58-60 | IN | denotes | of |
T2316 | 61-70 | VBN | denotes | activated |
T2317 | 71-72 | NNP | denotes | T |
T2318 | 73-78 | NNS | denotes | cells |
T2319 | 79-80 | -LRB- | denotes | ( |
T2320 | 80-84 | NNP | denotes | NFAT |
T2321 | 84-85 | -RRB- | denotes | ) |
T2322 | 86-88 | CC | denotes | or |
T2323 | 89-96 | JJ | denotes | nuclear |
T2324 | 97-109 | NN | denotes | factor-kappa |
T2325 | 110-111 | NNP | denotes | B |
T2326 | 112-113 | -LRB- | denotes | ( |
T2327 | 113-118 | NNP | denotes | NF-κB |
T2328 | 118-119 | -RRB- | denotes | ) |
T2329 | 120-122 | TO | denotes | to |
T2330 | 123-131 | VB | denotes | regulate |
T2331 | 132-135 | DT | denotes | the |
T2332 | 136-149 | NN | denotes | transcription |
T2333 | 150-152 | IN | denotes | of |
T2334 | 153-162 | JJ | denotes | different |
T2335 | 163-169 | NN | denotes | target |
T2336 | 170-175 | NNS | denotes | genes |
T2337 | 176-177 | -LRB- | denotes | ( |
T2338 | 177-185 | NNP | denotes | Schubert |
T2339 | 186-188 | FW | denotes | et |
T2340 | 189-192 | FW | denotes | al. |
T2341 | 192-193 | , | denotes | , |
T2342 | 194-198 | CD | denotes | 2001 |
T2343 | 198-199 | : | denotes | ; |
T2344 | 200-208 | NNP | denotes | Bettelli |
T2345 | 209-211 | FW | denotes | et |
T2346 | 212-215 | FW | denotes | al. |
T2347 | 215-216 | , | denotes | , |
T2348 | 217-221 | CD | denotes | 2005 |
T2349 | 221-222 | : | denotes | ; |
T2350 | 223-225 | NNP | denotes | Wu |
T2351 | 226-228 | FW | denotes | et |
T2352 | 229-232 | FW | denotes | al. |
T2353 | 232-233 | , | denotes | , |
T2354 | 234-238 | CD | denotes | 2006 |
T2355 | 238-239 | -RRB- | denotes | ) |
T2356 | 239-240 | . | denotes | . |
R1776 | T2345 | T2346 | compound | et,al. |
R1778 | T2346 | T2310 | conj | al.,cooperates |
R1779 | T2347 | T2346 | punct | ",",al. |
R1780 | T2348 | T2346 | npadvmod | 2005,al. |
R1782 | T2349 | T2310 | punct | ;,cooperates |
R1783 | T2350 | T2352 | compound | Wu,al. |
R1785 | T2351 | T2352 | compound | et,al. |
R1786 | T2352 | T2310 | conj | al.,cooperates |
R1790 | T2353 | T2352 | punct | ",",al. |
R1791 | T2354 | T2352 | npadvmod | 2006,al. |
R1793 | T2355 | T2352 | punct | ),al. |
R1794 | T2356 | T2307 | punct | .,known |
R1897 | T2305 | T2307 | nsubjpass | It,known |
R1901 | T2306 | T2307 | auxpass | is,known |
R1905 | T2307 | T2307 | ROOT | known,known |
R1911 | T2308 | T2310 | mark | that,cooperates |
R1915 | T2309 | T2310 | nsubj | Foxp3,cooperates |
R1919 | T2310 | T2307 | ccomp | cooperates,known |
R1920 | T2311 | T2310 | prep | with,cooperates |
R1921 | T2312 | T2314 | det | the,factor |
R1924 | T2313 | T2314 | amod | nuclear,factor |
R1928 | T2314 | T2311 | pobj | factor,with |
R1931 | T2315 | T2314 | prep | of,factor |
R1935 | T2316 | T2318 | amod | activated,cells |
R1939 | T2317 | T2318 | compound | T,cells |
R1942 | T2318 | T2315 | pobj | cells,of |
R1946 | T2319 | T2320 | punct | (,NFAT |
R1949 | T2320 | T2318 | appos | NFAT,cells |
R1953 | T2321 | T2320 | punct | ),NFAT |
R1957 | T2322 | T2320 | cc | or,NFAT |
R1961 | T2323 | T2324 | amod | nuclear,factor-kappa |
R1965 | T2324 | T2325 | compound | factor-kappa,B |
R1969 | T2325 | T2320 | conj | B,NFAT |
R1972 | T2326 | T2325 | punct | (,B |
R1975 | T2327 | T2325 | appos | NF-κB,B |
R1977 | T2328 | T2325 | punct | ),B |
R1980 | T2329 | T2330 | aux | to,regulate |
R1984 | T2330 | T2310 | advcl | regulate,cooperates |
R1988 | T2331 | T2332 | det | the,transcription |
R1991 | T2332 | T2330 | dobj | transcription,regulate |
R1994 | T2333 | T2332 | prep | of,transcription |
R2006 | T2335 | T2336 | compound | target,genes |
R2014 | T2336 | T2333 | pobj | genes,of |
R2018 | T2337 | T2340 | punct | (,al. |
R2023 | T2338 | T2340 | compound | Schubert,al. |
R2027 | T2339 | T2340 | nmod | et,al. |
R2031 | T2340 | T2332 | appos | al.,transcription |
R2035 | T2341 | T2340 | punct | ",",al. |
R2000 | T2334 | T2336 | amod | different,genes |
R1772 | T2342 | T2340 | npadvmod | 2001,al. |
R1773 | T2343 | T2310 | punct | ;,cooperates |
R1775 | T2344 | T2346 | compound | Bettelli,al. |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2971 | 136-149 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3010 | 73-78 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1280 | 0-240 | Sentence | denotes | It is known that Foxp3 cooperates with the nuclear factor of activated T cells (NFAT) or nuclear factor-kappa B (NF-κB) to regulate the transcription of different target genes (Schubert et al., 2001; Bettelli et al., 2005; Wu et al., 2006). |
T16 | 0-240 | Sentence | denotes | It is known that Foxp3 cooperates with the nuclear factor of activated T cells (NFAT) or nuclear factor-kappa B (NF-κB) to regulate the transcription of different target genes (Schubert et al., 2001; Bettelli et al., 2005; Wu et al., 2006). |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3215 | 17-22 | Protein | denotes | Foxp3 |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3040 | 17-22 | Protein | denotes | Foxp3 |
T3041 | 80-84 | Protein | denotes | NFAT |
T3042 | 89-111 | Protein | denotes | nuclear factor-kappa B |
T3043 | 113-118 | Protein | denotes | NF-κB |
T3044 | 43-78 | Protein | denotes | nuclear factor of activated T cells |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1205 | 17-22 | Protein | denotes | Foxp3 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2041 | 17-22 | Q9BZS1 | denotes | Foxp3 |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1123 | 17-22 | Protein | denotes | Foxp3 |