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PMC:2791889 / 9455-9740 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5620 31-36 Q14765 denotes STAT4
T5621 73-78 P01579 denotes IFN-γ
T5622 185-189 P05112 denotes IL-4
T5623 199-204 P22301 denotes IL-10
T5624 234-239 Q14765 denotes STAT4
T5625 255-260 P22301 denotes IL-10

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation Speculation
T4908 20-27 Negative_regulation denotes absence
T4909 31-36 Protein denotes STAT4
T4910 62-72 Gene_expression denotes expressing
T4911 73-78 Protein denotes IFN-γ
T4912 96-106 Negative_regulation denotes diminished
T4913 138-146 Positive_regulation denotes increase
T4914 138-146 Positive_regulation denotes increase
T4915 174-184 Gene_expression denotes expressing true
T4916 174-184 Gene_expression denotes expressing
T4917 185-189 Protein denotes IL-4
T4918 199-204 Protein denotes IL-10
T4919 234-239 Protein denotes STAT4
T4920 240-251 Positive_regulation denotes contributes true
T4921 255-260 Protein denotes IL-10
T4922 261-271 Gene_expression denotes expression
R3695 T4908 T4912 causeOf absence,diminished
R3696 T4908 T4913 causeOf absence,increase
R3697 T4908 T4914 causeOf absence,increase
R3698 T4909 T4908 themeOf STAT4,absence
R3699 T4910 T4912 themeOf expressing,diminished
R3700 T4911 T4910 themeOf IFN-γ,expressing
R3701 T4915 T4914 themeOf expressing,increase
R3702 T4916 T4913 themeOf expressing,increase
R3703 T4917 T4916 themeOf IL-4,expressing
R3704 T4918 T4915 themeOf IL-10,expressing
R3705 T4919 T4920 causeOf STAT4,contributes
R3706 T4921 T4922 themeOf IL-10,expression
R3707 T4922 T4920 themeOf expression,contributes

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5136 0-2 IN denotes In
T5137 3-11 NN denotes contrast
T5138 11-12 -COMMA- denotes ,
T5139 13-15 IN denotes in
T5140 16-19 DT denotes the
T5141 20-27 NN denotes absence
T5142 28-30 IN denotes of
T5143 31-36 NN denotes STAT4
T5144 36-37 -COMMA- denotes ,
T5145 38-41 DT denotes the
T5146 42-52 NN denotes percentage
T5147 53-55 IN denotes of
T5148 56-61 NN denotes cells
T5149 62-72 VB denotes expressing
T5150 73-78 NN denotes IFN-γ
T5151 79-82 VB denotes was
T5152 83-95 RB denotes dramatically
T5153 96-106 VB denotes diminished
T5154 107-109 IN denotes as
T5155 110-118 VB denotes expected
T5156 119-122 CC denotes and
T5157 123-131 VB denotes resulted
T5158 132-134 IN denotes in
T5159 135-137 DT denotes an
T5160 138-146 NN denotes increase
T5161 147-149 IN denotes in
T5162 150-153 DT denotes the
T5163 154-164 NN denotes percentage
T5164 165-167 IN denotes of
T5165 168-173 NN denotes cells
T5166 174-184 VB denotes expressing
T5167 185-189 NN denotes IL-4
T5168 189-190 -COMMA- denotes ,
T5169 191-194 CC denotes but
T5170 195-198 RB denotes not
T5171 199-204 NN denotes IL-10
T5172 205-206 -LRB- denotes (
T5173 206-215 NN denotes Figure 2A
T5174 215-216 -RRB- denotes )
T5175 216-217 -COMMA- denotes ,
T5176 218-228 VB denotes suggesting
T5177 229-233 IN denotes that
T5178 234-239 NN denotes STAT4
T5179 240-251 VB denotes contributes
T5180 252-254 TO denotes to
T5181 255-260 NN denotes IL-10
T5182 261-271 NN denotes expression
T5183 272-274 IN denotes by
T5184 275-278 NN denotes Th1
T5185 279-284 NN denotes cells
R3868 T5137 T5136 arg2Of contrast,In
R3869 T5139 T5140 arg1Of in,the
R3870 T5139 T5142 arg1Of in,of
R3871 T5141 T5139 arg2Of absence,in
R3872 T5143 T5139 arg3Of STAT4,in
R3873 T5146 T5145 arg1Of percentage,the
R3874 T5146 T5147 arg1Of percentage,of
R3875 T5146 T5151 arg1Of percentage,was
R3876 T5146 T5153 arg2Of percentage,diminished
R3877 T5148 T5147 arg2Of cells,of
R3878 T5148 T5149 arg1Of cells,expressing
R3879 T5150 T5149 arg2Of IFN-γ,expressing
R3880 T5153 T5136 arg1Of diminished,In
R3881 T5153 T5138 arg1Of diminished,","
R3882 T5153 T5139 arg1Of diminished,in
R3883 T5153 T5144 arg1Of diminished,","
R3884 T5153 T5151 arg2Of diminished,was
R3885 T5153 T5152 arg1Of diminished,dramatically
R3886 T5153 T5154 arg1Of diminished,as
R3887 T5155 T5156 arg1Of expected,and
R3888 T5156 T5154 arg2Of and,as
R3889 T5156 T5175 arg1Of and,","
R3890 T5156 T5176 modOf and,suggesting
R3891 T5157 T5156 arg2Of resulted,and
R3892 T5157 T5158 arg1Of resulted,in
R3893 T5160 T5159 arg1Of increase,an
R3894 T5160 T5161 arg1Of increase,in
R3895 T5160 T5169 arg1Of increase,but
R3896 T5163 T5161 arg2Of percentage,in
R3897 T5163 T5162 arg1Of percentage,the
R3898 T5163 T5164 arg1Of percentage,of
R3899 T5165 T5164 arg2Of cells,of
R3900 T5165 T5166 arg1Of cells,expressing
R3901 T5167 T5166 arg2Of IL-4,expressing
R3902 T5169 T5158 arg2Of but,in
R3903 T5169 T5168 arg1Of but,","
R3904 T5169 T5170 arg1Of but,not
R3905 T5171 T5169 arg2Of IL-10,but
R3906 T5171 T5172 arg1Of IL-10,(
R3907 T5173 T5172 arg2Of Figure 2A,(
R3908 T5174 T5172 arg3Of ),(
R3909 T5178 T5179 arg1Of STAT4,contributes
R3910 T5179 T5176 arg2Of contributes,suggesting
R3911 T5179 T5177 arg1Of contributes,that
R3912 T5179 T5180 arg1Of contributes,to
R3913 T5182 T5180 arg2Of expression,to
R3914 T5182 T5181 arg1Of expression,IL-10
R3915 T5182 T5183 arg1Of expression,by
R3916 T5185 T5183 arg2Of cells,by
R3917 T5185 T5184 arg1Of cells,Th1

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5790 0-2 IN denotes In
T5791 3-11 NN denotes contrast
T5792 11-12 , denotes ,
T5793 13-15 IN denotes in
T5794 16-19 DT denotes the
T5795 20-27 NN denotes absence
T5796 28-30 IN denotes of
T5797 31-36 NNP denotes STAT4
T5798 36-37 , denotes ,
T5799 38-41 DT denotes the
T5800 42-52 NN denotes percentage
T5801 53-55 IN denotes of
T5802 56-61 NNS denotes cells
T5803 62-72 VBG denotes expressing
T5804 73-78 NNP denotes IFN-γ
T5805 79-82 VBD denotes was
T5806 83-95 RB denotes dramatically
T5807 96-106 VBN denotes diminished
T5808 107-109 IN denotes as
T5809 110-118 VBN denotes expected
T5810 119-122 CC denotes and
T5811 123-131 VBN denotes resulted
T5812 132-134 IN denotes in
T5813 135-137 DT denotes an
T5814 138-146 NN denotes increase
T5815 147-149 IN denotes in
T5816 150-153 DT denotes the
T5817 154-164 NN denotes percentage
T5818 165-167 IN denotes of
T5819 168-173 NNS denotes cells
T5820 174-184 VBG denotes expressing
T5821 185-189 NN denotes IL-4
T5822 189-190 , denotes ,
T5823 191-194 CC denotes but
T5824 195-198 RB denotes not
T5825 199-204 NNP denotes IL-10
T5826 205-206 -LRB- denotes (
T5827 206-212 NNP denotes Figure
T5828 213-215 NNP denotes 2A
T5829 215-216 -RRB- denotes )
T5830 216-217 , denotes ,
T5831 218-228 VBG denotes suggesting
T5832 229-233 IN denotes that
T5833 234-239 CD denotes STAT4
T5834 240-251 VBZ denotes contributes
T5835 252-254 TO denotes to
T5836 255-260 NNP denotes IL-10
T5837 261-271 NN denotes expression
T5838 272-274 IN denotes by
T5839 275-278 JJ denotes Th1
T5840 279-284 NNS denotes cells
T5841 284-285 . denotes .
R4448 T5790 T5807 prep In,diminished
R4449 T5791 T5790 pobj contrast,In
R4450 T5792 T5807 punct ",",diminished
R4451 T5793 T5807 prep in,diminished
R4452 T5794 T5795 det the,absence
R4453 T5795 T5793 pobj absence,in
R4454 T5796 T5795 prep of,absence
R4455 T5797 T5796 pobj STAT4,of
R4456 T5798 T5797 punct ",",STAT4
R4457 T5799 T5800 det the,percentage
R4458 T5800 T5807 nsubjpass percentage,diminished
R4459 T5801 T5800 prep of,percentage
R4460 T5802 T5801 pobj cells,of
R4461 T5803 T5802 acl expressing,cells
R4462 T5804 T5803 dobj IFN-γ,expressing
R4463 T5805 T5807 auxpass was,diminished
R4464 T5806 T5807 advmod dramatically,diminished
R4465 T5807 T5807 ROOT diminished,diminished
R4466 T5808 T5809 mark as,expected
R4467 T5809 T5807 advcl expected,diminished
R4468 T5810 T5809 cc and,expected
R4469 T5811 T5809 conj resulted,expected
R4470 T5812 T5811 prep in,resulted
R4471 T5813 T5814 det an,increase
R4472 T5814 T5812 pobj increase,in
R4473 T5815 T5814 prep in,increase
R4474 T5816 T5817 det the,percentage
R4475 T5817 T5815 pobj percentage,in
R4476 T5818 T5817 prep of,percentage
R4477 T5819 T5818 pobj cells,of
R4478 T5820 T5819 acl expressing,cells
R4479 T5821 T5820 dobj IL-4,expressing
R4480 T5822 T5811 punct ",",resulted
R4481 T5823 T5811 cc but,resulted
R4482 T5824 T5831 neg not,suggesting
R4483 T5825 T5831 dep IL-10,suggesting
R4484 T5826 T5828 punct (,2A
R4485 T5827 T5828 compound Figure,2A
R4486 T5828 T5825 parataxis 2A,IL-10
R4487 T5829 T5828 punct ),2A
R4488 T5830 T5831 punct ",",suggesting
R4489 T5831 T5807 advcl suggesting,diminished
R4490 T5832 T5834 mark that,contributes
R4491 T5833 T5834 nsubj STAT4,contributes
R4492 T5834 T5831 ccomp contributes,suggesting
R4493 T5835 T5834 prep to,contributes
R4494 T5836 T5837 compound IL-10,expression
R4495 T5837 T5835 pobj expression,to
R4496 T5838 T5837 prep by,expression
R4497 T5839 T5840 amod Th1,cells
R4498 T5840 T5838 pobj cells,by
R4499 T5841 T5807 punct .,diminished

GO-MF

Id Subject Object Predicate Lexical cue
T6346 199-204 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10
T6347 255-260 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10
T6364 185-189 http://purl.obolibrary.org/obo/GO_0005136 denotes IL-4

GO-CC

Id Subject Object Predicate Lexical cue
T6386 56-61 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T6387 168-173 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T6388 279-284 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T5023 0-285 Sentence denotes In contrast, in the absence of STAT4, the percentage of cells expressing IFN-γ was dramatically diminished as expected and resulted in an increase in the percentage of cells expressing IL-4, but not IL-10 (Figure 2A), suggesting that STAT4 contributes to IL-10 expression by Th1 cells.
T50 0-285 Sentence denotes In contrast, in the absence of STAT4, the percentage of cells expressing IFN-γ was dramatically diminished as expected and resulted in an increase in the percentage of cells expressing IL-4, but not IL-10 (Figure 2A), suggesting that STAT4 contributes to IL-10 expression by Th1 cells.

events-check-again

Id Subject Object Predicate Lexical cue Negation Speculation
T6692 20-27 Negative_regulation denotes absence
T6693 31-36 Protein denotes STAT4
T6694 62-72 Gene_expression denotes expressing
T6695 73-78 Protein denotes IFN-γ
T6696 96-106 Negative_regulation denotes diminished
T6697 138-146 Positive_regulation denotes increase
T6698 138-146 Positive_regulation denotes increase
T6699 174-184 Gene_expression denotes expressing true
T6700 174-184 Gene_expression denotes expressing
T6701 185-189 Protein denotes IL-4
T6702 199-204 Protein denotes IL-10
T6703 234-239 Protein denotes STAT4
T6704 240-251 Positive_regulation denotes contributes true
T6705 255-260 Protein denotes IL-10
T6706 261-271 Gene_expression denotes expression
R5095 T6692 T6696 causeOf absence,diminished
R5096 T6692 T6697 causeOf absence,increase
R5097 T6692 T6698 causeOf absence,increase
R5098 T6693 T6692 themeOf STAT4,absence
R5099 T6694 T6696 themeOf expressing,diminished
R5101 T6695 T6694 themeOf IFN-γ,expressing
R5103 T6699 T6698 themeOf expressing,increase
R5104 T6700 T6697 themeOf expressing,increase
R5105 T6701 T6700 themeOf IL-4,expressing
R5106 T6702 T6699 themeOf IL-10,expressing
R5107 T6703 T6704 causeOf STAT4,contributes
R5108 T6705 T6706 themeOf IL-10,expression
R5110 T6706 T6704 themeOf expression,contributes

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T6818 31-36 Protein denotes STAT4
T6819 73-78 Protein denotes IFN-γ
T6820 185-189 Protein denotes IL-4
T6821 234-239 Protein denotes STAT4
T6822 255-260 Protein denotes IL-10
T6823 20-27 Negative_regulation denotes absence
T6824 62-72 Gene_expression denotes expressing
T6825 96-106 Negative_regulation denotes diminished
T6826 174-184 Gene_expression denotes expressing
T6827 261-271 Gene_expression denotes expression
T6828 138-146 Positive_regulation denotes increase
T6829 240-251 Positive_regulation denotes contributes
R5197 T6818 T6823 themeOf STAT4,absence
R5198 T6819 T6824 themeOf IFN-γ,expressing
R5199 T6820 T6826 themeOf IL-4,expressing
R5200 T6821 T6829 causeOf STAT4,contributes
R5201 T6822 T6827 themeOf IL-10,expression
R5202 T6823 T6825 causeOf absence,diminished
R5203 T6824 T6825 themeOf expressing,diminished
R5204 T6826 T6828 themeOf expressing,increase
R5207 T6827 T6829 themeOf expression,contributes

test2

Id Subject Object Predicate Lexical cue
T4781 20-27 Negative_regulation denotes absence
T4782 31-36 Protein denotes STAT4
T4783 62-72 Gene_expression denotes expressing
T4784 73-78 Protein denotes IFN-γ
T4785 96-106 Negative_regulation denotes diminished
T4786 123-131 Positive_regulation denotes resulted
T4787 138-146 Positive_regulation denotes increase
T4788 174-184 Gene_expression denotes expressing
T4789 185-189 Protein denotes IL-4
T4790 199-204 Protein denotes IL-10
T4791 234-239 Protein denotes STAT4
T4792 240-251 Positive_regulation denotes contributes
T4793 255-260 Protein denotes IL-10
T4794 261-271 Gene_expression denotes expression
R3616 T4781 T4785 causeOf absence,diminished
R3617 T4781 T4786 causeOf absence,resulted
R3618 T4782 T4781 themeOf STAT4,absence
R3619 T4783 T4785 themeOf expressing,diminished
R3620 T4784 T4783 themeOf IFN-γ,expressing
R3621 T4788 T4787 themeOf expressing,increase
R3622 T4789 T4788 themeOf IL-4,expressing
R3623 T4790 T4788 themeOf IL-10,expressing
R3624 T4791 T4792 causeOf STAT4,contributes
R3625 T4793 T4794 themeOf IL-10,expression
R3626 T4794 T4792 themeOf expression,contributes