PMC:2791889 / 9204-9319 JSONTXT

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    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T5612","span":{"begin":6,"end":9},"obj":"P01730"},{"id":"T5613","span":{"begin":40,"end":45},"obj":"Q14765"},{"id":"T5614","span":{"begin":101,"end":106},"obj":"P29459"},{"id":"T5615","span":{"begin":101,"end":106},"obj":"P29460"},{"id":"T5616","span":{"begin":111,"end":114},"obj":"E2RVI8"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T4900","span":{"begin":6,"end":9},"obj":"Protein"},{"id":"T4901","span":{"begin":27,"end":36},"obj":"Negative_regulation"},{"id":"T4902","span":{"begin":40,"end":45},"obj":"Protein"},{"id":"T4903","span":{"begin":101,"end":106},"obj":"Protein"},{"id":"T4904","span":{"begin":111,"end":114},"obj":"Protein"}],"relations":[{"id":"R3693","pred":"themeOf","subj":"T4902","obj":"T4901"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA."}

    2_test

    {"project":"2_test","denotations":[{"id":"19646904-9846495-46582687","span":{"begin":62,"end":66},"obj":"9846495"},{"id":"T54011","span":{"begin":62,"end":66},"obj":"9846495"}],"text":"Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T5091","span":{"begin":0,"end":5},"obj":"JJ"},{"id":"T5092","span":{"begin":6,"end":10},"obj":"JJ"},{"id":"T5093","span":{"begin":11,"end":18},"obj":"NN"},{"id":"T5094","span":{"begin":19,"end":26},"obj":"NN"},{"id":"T5095","span":{"begin":27,"end":36},"obj":"JJ"},{"id":"T5096","span":{"begin":37,"end":39},"obj":"IN"},{"id":"T5097","span":{"begin":40,"end":45},"obj":"NN"},{"id":"T5098","span":{"begin":46,"end":47},"obj":"-LRB-"},{"id":"T5099","span":{"begin":47,"end":53},"obj":"NNP"},{"id":"T5100","span":{"begin":54,"end":60},"obj":"NNP"},{"id":"T5101","span":{"begin":60,"end":61},"obj":"-COMMA-"},{"id":"T5102","span":{"begin":62,"end":66},"obj":"CD"},{"id":"T5103","span":{"begin":66,"end":67},"obj":"-RRB-"},{"id":"T5104","span":{"begin":68,"end":72},"obj":"VB"},{"id":"T5105","span":{"begin":73,"end":81},"obj":"VB"},{"id":"T5106","span":{"begin":82,"end":84},"obj":"IN"},{"id":"T5107","span":{"begin":85,"end":88},"obj":"DT"},{"id":"T5108","span":{"begin":89,"end":97},"obj":"NN"},{"id":"T5109","span":{"begin":98,"end":100},"obj":"IN"},{"id":"T5110","span":{"begin":101,"end":106},"obj":"NN"},{"id":"T5111","span":{"begin":107,"end":110},"obj":"CC"},{"id":"T5112","span":{"begin":111,"end":114},"obj":"NN"}],"relations":[{"id":"R3823","pred":"arg1Of","subj":"T5094","obj":"T5091"},{"id":"R3824","pred":"arg1Of","subj":"T5094","obj":"T5092"},{"id":"R3825","pred":"arg1Of","subj":"T5094","obj":"T5093"},{"id":"R3826","pred":"arg1Of","subj":"T5094","obj":"T5095"},{"id":"R3827","pred":"arg1Of","subj":"T5094","obj":"T5098"},{"id":"R3828","pred":"arg1Of","subj":"T5094","obj":"T5104"},{"id":"R3829","pred":"arg2Of","subj":"T5094","obj":"T5105"},{"id":"R3830","pred":"arg1Of","subj":"T5095","obj":"T5096"},{"id":"R3831","pred":"arg2Of","subj":"T5097","obj":"T5096"},{"id":"R3832","pred":"arg2Of","subj":"T5100","obj":"T5098"},{"id":"R3833","pred":"arg1Of","subj":"T5100","obj":"T5099"},{"id":"R3834","pred":"arg1Of","subj":"T5100","obj":"T5101"},{"id":"R3835","pred":"arg2Of","subj":"T5102","obj":"T5101"},{"id":"R3836","pred":"arg3Of","subj":"T5103","obj":"T5098"},{"id":"R3837","pred":"arg2Of","subj":"T5105","obj":"T5104"},{"id":"R3838","pred":"arg1Of","subj":"T5105","obj":"T5106"},{"id":"R3839","pred":"arg2Of","subj":"T5108","obj":"T5106"},{"id":"R3840","pred":"arg1Of","subj":"T5108","obj":"T5107"},{"id":"R3841","pred":"arg1Of","subj":"T5108","obj":"T5109"},{"id":"R3842","pred":"arg1Of","subj":"T5110","obj":"T5111"},{"id":"R3843","pred":"arg2Of","subj":"T5111","obj":"T5109"},{"id":"R3844","pred":"arg2Of","subj":"T5112","obj":"T5111"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T5736","span":{"begin":0,"end":5},"obj":"JJ"},{"id":"T5737","span":{"begin":6,"end":9},"obj":"NNP"},{"id":"T5738","span":{"begin":9,"end":10},"obj":"NNP"},{"id":"T5739","span":{"begin":11,"end":15},"obj":"NNP"},{"id":"T5740","span":{"begin":15,"end":18},"obj":"CD"},{"id":"T5741","span":{"begin":19,"end":20},"obj":"NNP"},{"id":"T5742","span":{"begin":21,"end":26},"obj":"NNS"},{"id":"T5743","span":{"begin":27,"end":36},"obj":"NN"},{"id":"T5744","span":{"begin":37,"end":39},"obj":"IN"},{"id":"T5745","span":{"begin":40,"end":45},"obj":"NNP"},{"id":"T5746","span":{"begin":46,"end":47},"obj":"-LRB-"},{"id":"T5747","span":{"begin":47,"end":53},"obj":"NNP"},{"id":"T5748","span":{"begin":54,"end":56},"obj":"FW"},{"id":"T5749","span":{"begin":57,"end":60},"obj":"FW"},{"id":"T5750","span":{"begin":60,"end":61},"obj":","},{"id":"T5751","span":{"begin":62,"end":66},"obj":"CD"},{"id":"T5752","span":{"begin":66,"end":67},"obj":"-RRB-"},{"id":"T5753","span":{"begin":68,"end":72},"obj":"VBD"},{"id":"T5754","span":{"begin":73,"end":81},"obj":"VBN"},{"id":"T5755","span":{"begin":82,"end":84},"obj":"IN"},{"id":"T5756","span":{"begin":85,"end":88},"obj":"DT"},{"id":"T5757","span":{"begin":89,"end":97},"obj":"NN"},{"id":"T5758","span":{"begin":98,"end":100},"obj":"IN"},{"id":"T5759","span":{"begin":101,"end":106},"obj":"NN"},{"id":"T5760","span":{"begin":107,"end":110},"obj":"CC"},{"id":"T5761","span":{"begin":111,"end":114},"obj":"NNP"},{"id":"T5762","span":{"begin":114,"end":115},"obj":"."}],"relations":[{"id":"R4394","pred":"amod","subj":"T5736","obj":"T5742"},{"id":"R4395","pred":"nmod","subj":"T5737","obj":"T5742"},{"id":"R4396","pred":"nmod","subj":"T5738","obj":"T5742"},{"id":"R4397","pred":"nmod","subj":"T5739","obj":"T5742"},{"id":"R4398","pred":"nummod","subj":"T5740","obj":"T5742"},{"id":"R4399","pred":"compound","subj":"T5741","obj":"T5742"},{"id":"R4400","pred":"nsubj","subj":"T5742","obj":"T5753"},{"id":"R4401","pred":"acl","subj":"T5743","obj":"T5742"},{"id":"R4402","pred":"prep","subj":"T5744","obj":"T5743"},{"id":"R4403","pred":"pobj","subj":"T5745","obj":"T5744"},{"id":"R4404","pred":"punct","subj":"T5746","obj":"T5749"},{"id":"R4405","pred":"nmod","subj":"T5747","obj":"T5749"},{"id":"R4406","pred":"nmod","subj":"T5748","obj":"T5749"},{"id":"R4407","pred":"appos","subj":"T5749","obj":"T5743"},{"id":"R4408","pred":"punct","subj":"T5750","obj":"T5749"},{"id":"R4409","pred":"npadvmod","subj":"T5751","obj":"T5749"},{"id":"R4410","pred":"punct","subj":"T5752","obj":"T5742"},{"id":"R4411","pred":"ROOT","subj":"T5753","obj":"T5753"},{"id":"R4412","pred":"acomp","subj":"T5754","obj":"T5753"},{"id":"R4413","pred":"prep","subj":"T5755","obj":"T5754"},{"id":"R4414","pred":"det","subj":"T5756","obj":"T5757"},{"id":"R4415","pred":"pobj","subj":"T5757","obj":"T5755"},{"id":"R4416","pred":"prep","subj":"T5758","obj":"T5757"},{"id":"R4417","pred":"pobj","subj":"T5759","obj":"T5758"},{"id":"R4418","pred":"cc","subj":"T5760","obj":"T5759"},{"id":"R4419","pred":"conj","subj":"T5761","obj":"T5759"},{"id":"R4420","pred":"punct","subj":"T5762","obj":"T5753"}],"text":"Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T6375","span":{"begin":101,"end":106},"obj":"http://purl.obolibrary.org/obo/GO_0005143"}],"text":"Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T6383","span":{"begin":21,"end":26},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA."}

    sentences

    {"project":"sentences","denotations":[{"id":"T5021","span":{"begin":0,"end":115},"obj":"Sentence"},{"id":"T48","span":{"begin":0,"end":115},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T6684","span":{"begin":6,"end":9},"obj":"Protein"},{"id":"T6685","span":{"begin":27,"end":36},"obj":"Negative_regulation"},{"id":"T6686","span":{"begin":40,"end":45},"obj":"Protein"},{"id":"T6687","span":{"begin":101,"end":106},"obj":"Protein"},{"id":"T6688","span":{"begin":111,"end":114},"obj":"Protein"}],"relations":[{"id":"R5092","pred":"themeOf","subj":"T6686","obj":"T6685"}],"text":"Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T6815","span":{"begin":40,"end":45},"obj":"Protein"},{"id":"T6816","span":{"begin":101,"end":106},"obj":"Protein"},{"id":"T6817","span":{"begin":27,"end":36},"obj":"Negative_regulation"}],"relations":[{"id":"R5192","pred":"themeOf","subj":"T6815","obj":"T6817"}],"text":"Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA."}

    test2

    {"project":"test2","denotations":[{"id":"T4773","span":{"begin":6,"end":9},"obj":"Protein"},{"id":"T4774","span":{"begin":27,"end":36},"obj":"Negative_regulation"},{"id":"T4775","span":{"begin":40,"end":45},"obj":"Protein"},{"id":"T4776","span":{"begin":101,"end":106},"obj":"Protein"},{"id":"T4777","span":{"begin":111,"end":114},"obj":"Protein"}],"relations":[{"id":"R3614","pred":"themeOf","subj":"T4775","obj":"T4774"}],"attributes":[{"id":"M72","pred":"Negation","subj":"T4773","obj":"true"},{"id":"M73","pred":"Speculation","subj":"T4774","obj":"true"}],"text":"Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA."}