PMC:2791889 / 9204-9319
Annnotations
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5612 | 6-9 | P01730 | denotes | CD4 |
T5613 | 40-45 | Q14765 | denotes | STAT4 |
T5614 | 101-106 | P29459 | denotes | IL-12 |
T5615 | 101-106 | P29460 | denotes | IL-12 |
T5616 | 111-114 | E2RVI8 | denotes | OVA |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4900 | 6-9 | Protein | denotes | CD4 |
T4901 | 27-36 | Negative_regulation | denotes | deficient |
T4902 | 40-45 | Protein | denotes | STAT4 |
T4903 | 101-106 | Protein | denotes | IL-12 |
T4904 | 111-114 | Protein | denotes | OVA |
R3693 | T4902 | T4901 | themeOf | STAT4,deficient |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
19646904-9846495-46582687 | 62-66 | 9846495 | denotes | 1998 |
T54011 | 62-66 | 9846495 | denotes | 1998 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5091 | 0-5 | JJ | denotes | Naive |
T5092 | 6-10 | JJ | denotes | CD4+ |
T5093 | 11-18 | NN | denotes | D011.10 |
T5094 | 19-26 | NN | denotes | T cells |
T5095 | 27-36 | JJ | denotes | deficient |
T5096 | 37-39 | IN | denotes | in |
T5097 | 40-45 | NN | denotes | STAT4 |
T5098 | 46-47 | -LRB- | denotes | ( |
T5099 | 47-53 | NNP | denotes | Ouyang |
T5100 | 54-60 | NNP | denotes | et al. |
T5101 | 60-61 | -COMMA- | denotes | , |
T5102 | 62-66 | CD | denotes | 1998 |
T5103 | 66-67 | -RRB- | denotes | ) |
T5104 | 68-72 | VB | denotes | were |
T5105 | 73-81 | VB | denotes | cultured |
T5106 | 82-84 | IN | denotes | in |
T5107 | 85-88 | DT | denotes | the |
T5108 | 89-97 | NN | denotes | presence |
T5109 | 98-100 | IN | denotes | of |
T5110 | 101-106 | NN | denotes | IL-12 |
T5111 | 107-110 | CC | denotes | and |
T5112 | 111-114 | NN | denotes | OVA |
R3823 | T5094 | T5091 | arg1Of | T cells,Naive |
R3824 | T5094 | T5092 | arg1Of | T cells,CD4+ |
R3825 | T5094 | T5093 | arg1Of | T cells,D011.10 |
R3826 | T5094 | T5095 | arg1Of | T cells,deficient |
R3827 | T5094 | T5098 | arg1Of | T cells,( |
R3828 | T5094 | T5104 | arg1Of | T cells,were |
R3829 | T5094 | T5105 | arg2Of | T cells,cultured |
R3830 | T5095 | T5096 | arg1Of | deficient,in |
R3831 | T5097 | T5096 | arg2Of | STAT4,in |
R3832 | T5100 | T5098 | arg2Of | et al.,( |
R3833 | T5100 | T5099 | arg1Of | et al.,Ouyang |
R3834 | T5100 | T5101 | arg1Of | et al.,"," |
R3835 | T5102 | T5101 | arg2Of | 1998,"," |
R3836 | T5103 | T5098 | arg3Of | ),( |
R3837 | T5105 | T5104 | arg2Of | cultured,were |
R3838 | T5105 | T5106 | arg1Of | cultured,in |
R3839 | T5108 | T5106 | arg2Of | presence,in |
R3840 | T5108 | T5107 | arg1Of | presence,the |
R3841 | T5108 | T5109 | arg1Of | presence,of |
R3842 | T5110 | T5111 | arg1Of | IL-12,and |
R3843 | T5111 | T5109 | arg2Of | and,of |
R3844 | T5112 | T5111 | arg2Of | OVA,and |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5736 | 0-5 | JJ | denotes | Naive |
T5737 | 6-9 | NNP | denotes | CD4 |
T5738 | 9-10 | NNP | denotes | + |
T5739 | 11-15 | NNP | denotes | D011 |
T5740 | 15-18 | CD | denotes | .10 |
T5741 | 19-20 | NNP | denotes | T |
T5742 | 21-26 | NNS | denotes | cells |
T5743 | 27-36 | NN | denotes | deficient |
T5744 | 37-39 | IN | denotes | in |
T5745 | 40-45 | NNP | denotes | STAT4 |
T5746 | 46-47 | -LRB- | denotes | ( |
T5747 | 47-53 | NNP | denotes | Ouyang |
T5748 | 54-56 | FW | denotes | et |
T5749 | 57-60 | FW | denotes | al. |
T5750 | 60-61 | , | denotes | , |
T5751 | 62-66 | CD | denotes | 1998 |
T5752 | 66-67 | -RRB- | denotes | ) |
T5753 | 68-72 | VBD | denotes | were |
T5754 | 73-81 | VBN | denotes | cultured |
T5755 | 82-84 | IN | denotes | in |
T5756 | 85-88 | DT | denotes | the |
T5757 | 89-97 | NN | denotes | presence |
T5758 | 98-100 | IN | denotes | of |
T5759 | 101-106 | NN | denotes | IL-12 |
T5760 | 107-110 | CC | denotes | and |
T5761 | 111-114 | NNP | denotes | OVA |
T5762 | 114-115 | . | denotes | . |
R4394 | T5736 | T5742 | amod | Naive,cells |
R4395 | T5737 | T5742 | nmod | CD4,cells |
R4396 | T5738 | T5742 | nmod | +,cells |
R4397 | T5739 | T5742 | nmod | D011,cells |
R4398 | T5740 | T5742 | nummod | .10,cells |
R4399 | T5741 | T5742 | compound | T,cells |
R4400 | T5742 | T5753 | nsubj | cells,were |
R4401 | T5743 | T5742 | acl | deficient,cells |
R4402 | T5744 | T5743 | prep | in,deficient |
R4403 | T5745 | T5744 | pobj | STAT4,in |
R4404 | T5746 | T5749 | punct | (,al. |
R4405 | T5747 | T5749 | nmod | Ouyang,al. |
R4406 | T5748 | T5749 | nmod | et,al. |
R4407 | T5749 | T5743 | appos | al.,deficient |
R4408 | T5750 | T5749 | punct | ",",al. |
R4409 | T5751 | T5749 | npadvmod | 1998,al. |
R4410 | T5752 | T5742 | punct | ),cells |
R4411 | T5753 | T5753 | ROOT | were,were |
R4412 | T5754 | T5753 | acomp | cultured,were |
R4413 | T5755 | T5754 | prep | in,cultured |
R4414 | T5756 | T5757 | det | the,presence |
R4415 | T5757 | T5755 | pobj | presence,in |
R4416 | T5758 | T5757 | prep | of,presence |
R4417 | T5759 | T5758 | pobj | IL-12,of |
R4418 | T5760 | T5759 | cc | and,IL-12 |
R4419 | T5761 | T5759 | conj | OVA,IL-12 |
R4420 | T5762 | T5753 | punct | .,were |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6375 | 101-106 | http://purl.obolibrary.org/obo/GO_0005143 | denotes | IL-12 |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6383 | 21-26 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5021 | 0-115 | Sentence | denotes | Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA. |
T48 | 0-115 | Sentence | denotes | Naive CD4+ D011.10 T cells deficient in STAT4 (Ouyang et al., 1998) were cultured in the presence of IL-12 and OVA. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6684 | 6-9 | Protein | denotes | CD4 |
T6685 | 27-36 | Negative_regulation | denotes | deficient |
T6686 | 40-45 | Protein | denotes | STAT4 |
T6687 | 101-106 | Protein | denotes | IL-12 |
T6688 | 111-114 | Protein | denotes | OVA |
R5092 | T6686 | T6685 | themeOf | STAT4,deficient |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6815 | 40-45 | Protein | denotes | STAT4 |
T6816 | 101-106 | Protein | denotes | IL-12 |
T6817 | 27-36 | Negative_regulation | denotes | deficient |
R5192 | T6815 | T6817 | themeOf | STAT4,deficient |
test2
Id | Subject | Object | Predicate | Lexical cue | Negation | Speculation |
---|---|---|---|---|---|---|
T4773 | 6-9 | Protein | denotes | CD4 | true | |
T4774 | 27-36 | Negative_regulation | denotes | deficient | true | |
T4775 | 40-45 | Protein | denotes | STAT4 | ||
T4776 | 101-106 | Protein | denotes | IL-12 | ||
T4777 | 111-114 | Protein | denotes | OVA | ||
R3614 | T4775 | T4774 | themeOf | STAT4,deficient |