PMC:2791889 / 22381-22530
Annnotations
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15750 | 66-70 | P27361 | denotes | ERK1 |
T15751 | 75-79 | P28482 | denotes | ERK2 |
T15752 | 100-105 | P29459 | denotes | IL-12 |
T15753 | 100-105 | P29460 | denotes | IL-12 |
T15754 | 143-148 | P22301 | denotes | IL-10 |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13969 | 100-105 | Protein | denotes | IL-12 |
T13970 | 106-113 | Positive_regulation | denotes | induced |
T13971 | 114-120 | Protein | denotes | STAT-4 |
T13972 | 121-131 | Positive_regulation | denotes | activation |
T13973 | 135-142 | Gene_expression | denotes | produce |
T13974 | 143-148 | Protein | denotes | IL-10 |
T13962 | 31-39 | Positive_regulation | denotes | required |
T13963 | 31-39 | Positive_regulation | denotes | required |
T13964 | 31-39 | Positive_regulation | denotes | required |
T13965 | 66-70 | Protein | denotes | ERK1 |
T13966 | 75-79 | Protein | denotes | ERK2 |
T13967 | 80-95 | Phosphorylation | denotes | phosphorylation |
T13968 | 80-95 | Phosphorylation | denotes | phosphorylation |
R10839 | T13965 | T13968 | themeOf | ERK1,phosphorylation |
R10840 | T13966 | T13967 | themeOf | ERK2,phosphorylation |
R10841 | T13967 | T13964 | causeOf | phosphorylation,required |
R10843 | T13969 | T13970 | causeOf | IL-12,induced |
R10844 | T13971 | T13972 | themeOf | STAT-4,activation |
R10845 | T13972 | T13963 | causeOf | activation,required |
R10846 | T13972 | T13970 | themeOf | activation,induced |
R10848 | T13973 | T13964 | themeOf | produce,required |
R10849 | T13973 | T13963 | themeOf | produce,required |
R10850 | T13974 | T13973 | themeOf | IL-10,produce |
R10842 | T13968 | T13962 | causeOf | phosphorylation,required |
R10847 | T13973 | T13962 | themeOf | produce,required |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14321 | 0-4 | RB | denotes | Here |
T14322 | 4-5 | -COMMA- | denotes | , |
T14323 | 6-8 | PRP | denotes | we |
T14324 | 9-15 | VB | denotes | showed |
T14325 | 16-20 | IN | denotes | that |
T14326 | 21-24 | NN | denotes | Th1 |
T14327 | 25-30 | NN | denotes | cells |
T14328 | 31-39 | VB | denotes | required |
T14329 | 40-65 | JJ | denotes | high-antigen-dose-induced |
T14330 | 66-70 | NN | denotes | ERK1 |
T14331 | 71-74 | CC | denotes | and |
T14332 | 75-79 | NN | denotes | ERK2 |
T14333 | 80-95 | NN | denotes | phosphorylation |
T14334 | 96-99 | CC | denotes | and |
T14335 | 100-113 | JJ | denotes | IL-12-induced |
T14336 | 114-120 | NN | denotes | STAT-4 |
T14337 | 121-131 | NN | denotes | activation |
T14338 | 132-134 | TO | denotes | to |
T14339 | 135-142 | VB | denotes | produce |
T14340 | 143-148 | NN | denotes | IL-10 |
R11083 | T14323 | T14324 | arg1Of | we,showed |
R11084 | T14324 | T14321 | arg1Of | showed,Here |
R11085 | T14324 | T14322 | arg1Of | showed,"," |
R11086 | T14327 | T14326 | arg1Of | cells,Th1 |
R11087 | T14327 | T14328 | arg1Of | cells,required |
R11088 | T14328 | T14324 | arg2Of | required,showed |
R11089 | T14328 | T14325 | arg1Of | required,that |
R11090 | T14330 | T14329 | arg1Of | ERK1,high-antigen-dose-induced |
R11091 | T14330 | T14331 | arg1Of | ERK1,and |
R11092 | T14331 | T14334 | arg1Of | and,and |
R11093 | T14333 | T14331 | arg2Of | phosphorylation,and |
R11094 | T14333 | T14332 | arg1Of | phosphorylation,ERK2 |
R11095 | T14334 | T14328 | arg2Of | and,required |
R11096 | T14337 | T14334 | arg2Of | activation,and |
R11097 | T14337 | T14335 | arg1Of | activation,IL-12-induced |
R11098 | T14337 | T14336 | arg1Of | activation,STAT-4 |
R11099 | T14337 | T14338 | modOf | activation,to |
R11100 | T14339 | T14338 | arg1Of | produce,to |
R11101 | T14340 | T14339 | arg2Of | IL-10,produce |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15963 | 0-4 | RB | denotes | Here |
T15964 | 4-5 | , | denotes | , |
T15965 | 6-8 | PRP | denotes | we |
T15966 | 9-15 | VBD | denotes | showed |
T15967 | 16-20 | IN | denotes | that |
T15968 | 21-24 | JJ | denotes | Th1 |
T15969 | 25-30 | NNS | denotes | cells |
T15970 | 31-39 | VBN | denotes | required |
T15971 | 40-65 | JJ | denotes | high-antigen-dose-induced |
T15972 | 66-70 | CD | denotes | ERK1 |
T15973 | 71-74 | CC | denotes | and |
T15974 | 75-79 | CD | denotes | ERK2 |
T15975 | 80-95 | NN | denotes | phosphorylation |
T15976 | 96-99 | CC | denotes | and |
T15977 | 100-113 | JJ | denotes | IL-12-induced |
T15978 | 114-120 | NN | denotes | STAT-4 |
T15979 | 121-131 | NN | denotes | activation |
T15980 | 132-134 | TO | denotes | to |
T15981 | 135-142 | VB | denotes | produce |
T15982 | 143-148 | NNP | denotes | IL-10 |
T15983 | 148-149 | . | denotes | . |
R12674 | T15963 | T15966 | advmod | Here,showed |
R12675 | T15964 | T15966 | punct | ",",showed |
R12676 | T15965 | T15966 | nsubj | we,showed |
R12677 | T15966 | T15966 | ROOT | showed,showed |
R12678 | T15967 | T15981 | mark | that,produce |
R12679 | T15968 | T15969 | amod | Th1,cells |
R12680 | T15969 | T15981 | nsubj | cells,produce |
R12681 | T15970 | T15969 | acl | required,cells |
R12682 | T15971 | T15970 | dobj | high-antigen-dose-induced,required |
R12683 | T15972 | T15971 | nummod | ERK1,high-antigen-dose-induced |
R12684 | T15973 | T15972 | cc | and,ERK1 |
R12685 | T15974 | T15972 | conj | ERK2,ERK1 |
R12686 | T15975 | T15979 | nmod | phosphorylation,activation |
R12687 | T15976 | T15975 | cc | and,phosphorylation |
R12688 | T15977 | T15975 | conj | IL-12-induced,phosphorylation |
R12689 | T15978 | T15979 | compound | STAT-4,activation |
R12690 | T15979 | T15969 | conj | activation,cells |
R12691 | T15980 | T15981 | aux | to,produce |
R12692 | T15981 | T15966 | ccomp | produce,showed |
R12693 | T15982 | T15981 | dobj | IL-10,produce |
R12694 | T15983 | T15966 | punct | .,showed |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17532 | 66-70 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | ERK1 |
T17537 | 75-79 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | ERK2 |
T17543 | 80-95 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17582 | 143-148 | http://purl.obolibrary.org/obo/GO_0005141 | denotes | IL-10 |
T17629 | 66-70 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | ERK1 |
T17634 | 75-79 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | ERK2 |
T17640 | 100-105 | http://purl.obolibrary.org/obo/GO_0005143 | denotes | IL-12 |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17668 | 25-30 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14196 | 0-149 | Sentence | denotes | Here, we showed that Th1 cells required high-antigen-dose-induced ERK1 and ERK2 phosphorylation and IL-12-induced STAT-4 activation to produce IL-10. |
T118 | 0-149 | Sentence | denotes | Here, we showed that Th1 cells required high-antigen-dose-induced ERK1 and ERK2 phosphorylation and IL-12-induced STAT-4 activation to produce IL-10. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18195 | 31-39 | Positive_regulation | denotes | required |
T18196 | 31-39 | Positive_regulation | denotes | required |
T18197 | 31-39 | Positive_regulation | denotes | required |
T18198 | 66-70 | Protein | denotes | ERK1 |
T18199 | 75-79 | Protein | denotes | ERK2 |
T18200 | 80-95 | Phosphorylation | denotes | phosphorylation |
T18201 | 80-95 | Phosphorylation | denotes | phosphorylation |
T18202 | 100-105 | Protein | denotes | IL-12 |
T18203 | 106-113 | Positive_regulation | denotes | induced |
T18204 | 114-120 | Protein | denotes | STAT-4 |
T18205 | 121-131 | Positive_regulation | denotes | activation |
T18206 | 135-142 | Gene_expression | denotes | produce |
T18207 | 143-148 | Protein | denotes | IL-10 |
R14487 | T18198 | T18201 | themeOf | ERK1,phosphorylation |
R14488 | T18199 | T18200 | themeOf | ERK2,phosphorylation |
R14489 | T18200 | T18197 | causeOf | phosphorylation,required |
R14490 | T18201 | T18195 | causeOf | phosphorylation,required |
R14492 | T18202 | T18203 | causeOf | IL-12,induced |
R14494 | T18204 | T18205 | themeOf | STAT-4,activation |
R14495 | T18205 | T18196 | causeOf | activation,required |
R14496 | T18205 | T18203 | themeOf | activation,induced |
R14497 | T18206 | T18195 | themeOf | produce,required |
R14498 | T18206 | T18197 | themeOf | produce,required |
R14499 | T18206 | T18196 | themeOf | produce,required |
R14501 | T18207 | T18206 | themeOf | IL-10,produce |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18433 | 66-70 | Protein | denotes | ERK1 |
T18434 | 75-79 | Protein | denotes | ERK2 |
T18435 | 143-148 | Protein | denotes | IL-10 |
T18436 | 80-95 | Phosphorylation | denotes | phosphorylation |
T18437 | 80-95 | Phosphorylation | denotes | phosphorylation |
T18438 | 135-142 | Gene_expression | denotes | produce |
T18439 | 31-39 | Positive_regulation | denotes | required |
T18440 | 31-39 | Positive_regulation | denotes | required |
R14633 | T18433 | T18436 | themeOf | ERK1,phosphorylation |
R14635 | T18434 | T18437 | themeOf | ERK2,phosphorylation |
R14636 | T18435 | T18438 | themeOf | IL-10,produce |
R14637 | T18436 | T18439 | themeOf | phosphorylation,required |
R14639 | T18437 | T18440 | themeOf | phosphorylation,required |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13734 | 31-39 | Positive_regulation | denotes | required |
T13735 | 58-65 | Positive_regulation | denotes | induced |
T13736 | 66-70 | Protein | denotes | ERK1 |
T13737 | 75-79 | Protein | denotes | ERK2 |
T13738 | 80-95 | Phosphorylation | denotes | phosphorylation |
T13739 | 100-105 | Protein | denotes | IL-12 |
T13740 | 106-113 | Positive_regulation | denotes | induced |
T13741 | 114-120 | Protein | denotes | STAT-4 |
T13742 | 121-131 | Positive_regulation | denotes | activation |
T13743 | 135-142 | Gene_expression | denotes | produce |
T13744 | 143-148 | Protein | denotes | IL-10 |
R10697 | T13735 | T13734 | themeOf | induced,required |
R10698 | T13736 | T13738 | themeOf | ERK1,phosphorylation |
R10699 | T13737 | T13738 | themeOf | ERK2,phosphorylation |
R10700 | T13738 | T13735 | themeOf | phosphorylation,induced |
R10701 | T13739 | T13740 | causeOf | IL-12,induced |
R10702 | T13740 | T13735 | themeOf | induced,induced |
R10703 | T13741 | T13742 | themeOf | STAT-4,activation |
R10704 | T13742 | T13740 | themeOf | activation,induced |
R10705 | T13743 | T13740 | themeOf | produce,induced |
R10706 | T13744 | T13743 | themeOf | IL-10,produce |