PMC:2791889 / 1612-1975 JSONTXT

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1137","span":{"begin":75,"end":80},"obj":"P22301"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"infection (Brooks et al., 2006; Ejrnaes et al., 2006; Moore et al., 2001). IL-10 is expressed by T helper 2 (Th2) cells, B cells, DCs, and macrophages (Moore et al., 2001), and also by Th1 cells (Anderson et al., 2007; Assenmacher et al., 1994; Del Prete et al., 1993; Gerosa et al., 1996; Jankovic et al., 2007; Pohl-Koppe et al., 1998) and (reviewed in O'Garra "}

{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T1017","span":{"begin":75,"end":80},"obj":"Protein"},{"id":"T1018","span":{"begin":84,"end":93},"obj":"Gene_expression"}],"relations":[{"id":"R741","pred":"themeOf","subj":"T1017","obj":"T1018"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"infection (Brooks et al., 2006; Ejrnaes et al., 2006; Moore et al., 2001). IL-10 is expressed by T helper 2 (Th2) cells, B cells, DCs, and macrophages (Moore et al., 2001), and also by Th1 cells (Anderson et al., 2007; Assenmacher et al., 1994; Del Prete et al., 1993; Gerosa et al., 1996; Jankovic et al., 2007; Pohl-Koppe et al., 1998) and (reviewed in O'Garra "}

{"project":"2_test","denotations":[{"id":"19646904-17041596-46582666","span":{"begin":68,"end":72},"obj":"17041596"},{"id":"19646904-17030951-46582666","span":{"begin":68,"end":72},"obj":"17030951"},{"id":"19646904-11244051-46582666","span":{"begin":68,"end":72},"obj":"11244051"},{"id":"19646904-11244051-46582667","span":{"begin":166,"end":170},"obj":"11244051"},{"id":"19646904-17283207-46582668","span":{"begin":332,"end":336},"obj":"17283207"},{"id":"19646904-7910138-46582668","span":{"begin":332,"end":336},"obj":"7910138"},{"id":"19646904-8419468-46582668","span":{"begin":332,"end":336},"obj":"8419468"},{"id":"19646904-8676077-46582668","span":{"begin":332,"end":336},"obj":"8676077"},{"id":"19646904-17283209-46582668","span":{"begin":332,"end":336},"obj":"17283209"},{"id":"19646904-9469440-46582668","span":{"begin":332,"end":336},"obj":"9469440"},{"id":"T52634","span":{"begin":68,"end":72},"obj":"17041596"},{"id":"T52687","span":{"begin":68,"end":72},"obj":"17030951"},{"id":"T23420","span":{"begin":68,"end":72},"obj":"11244051"},{"id":"T48009","span":{"begin":166,"end":170},"obj":"11244051"},{"id":"T34540","span":{"begin":332,"end":336},"obj":"17283207"},{"id":"T71986","span":{"begin":332,"end":336},"obj":"7910138"},{"id":"T78014","span":{"begin":332,"end":336},"obj":"8419468"},{"id":"T17579","span":{"begin":332,"end":336},"obj":"8676077"},{"id":"T81146","span":{"begin":332,"end":336},"obj":"17283209"},{"id":"T30548","span":{"begin":332,"end":336},"obj":"9469440"}],"text":"infection (Brooks et al., 2006; Ejrnaes et al., 2006; Moore et al., 2001). IL-10 is expressed by T helper 2 (Th2) cells, B cells, DCs, and macrophages (Moore et al., 2001), and also by Th1 cells (Anderson et al., 2007; Assenmacher et al., 1994; Del Prete et al., 1993; Gerosa et al., 1996; Jankovic et al., 2007; Pohl-Koppe et al., 1998) and (reviewed in O'Garra "}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1260","span":{"begin":0,"end":9},"obj":"NN"},{"id":"T1261","span":{"begin":10,"end":11},"obj":"-LRB-"},{"id":"T1262","span":{"begin":11,"end":17},"obj":"NNP"},{"id":"T1263","span":{"begin":18,"end":20},"obj":"FW"},{"id":"T1264","span":{"begin":21,"end":24},"obj":"FW"},{"id":"T1265","span":{"begin":24,"end":25},"obj":","},{"id":"T1266","span":{"begin":26,"end":30},"obj":"CD"},{"id":"T1267","span":{"begin":30,"end":31},"obj":":"},{"id":"T1268","span":{"begin":32,"end":39},"obj":"NNP"},{"id":"T1269","span":{"begin":40,"end":42},"obj":"FW"},{"id":"T1270","span":{"begin":43,"end":46},"obj":"FW"},{"id":"T1271","span":{"begin":46,"end":47},"obj":","},{"id":"T1272","span":{"begin":48,"end":52},"obj":"CD"},{"id":"T1273","span":{"begin":52,"end":53},"obj":":"},{"id":"T1274","span":{"begin":54,"end":59},"obj":"NNP"},{"id":"T1275","span":{"begin":60,"end":62},"obj":"FW"},{"id":"T1276","span":{"begin":63,"end":66},"obj":"FW"},{"id":"T1277","span":{"begin":66,"end":67},"obj":","},{"id":"T1278","span":{"begin":68,"end":72},"obj":"CD"},{"id":"T1279","span":{"begin":72,"end":73},"obj":"-RRB-"},{"id":"T1280","span":{"begin":73,"end":74},"obj":"."},{"id":"T1281","span":{"begin":75,"end":80},"obj":"NN"},{"id":"T1282","span":{"begin":81,"end":83},"obj":"VBZ"},{"id":"T1283","span":{"begin":84,"end":93},"obj":"VBN"},{"id":"T1284","span":{"begin":94,"end":96},"obj":"IN"},{"id":"T1285","span":{"begin":97,"end":98},"obj":"NNP"},{"id":"T1286","span":{"begin":99,"end":105},"obj":"NN"},{"id":"T1287","span":{"begin":106,"end":107},"obj":"CD"},{"id":"T1288","span":{"begin":108,"end":109},"obj":"-LRB-"},{"id":"T1289","span":{"begin":109,"end":112},"obj":"NN"},{"id":"T1290","span":{"begin":112,"end":113},"obj":"-RRB-"},{"id":"T1291","span":{"begin":114,"end":119},"obj":"NNS"},{"id":"T1292","span":{"begin":119,"end":120},"obj":","},{"id":"T1293","span":{"begin":121,"end":122},"obj":"NNP"},{"id":"T1294","span":{"begin":123,"end":128},"obj":"NNS"},{"id":"T1295","span":{"begin":128,"end":129},"obj":","},{"id":"T1296","span":{"begin":130,"end":133},"obj":"NNP"},{"id":"T1297","span":{"begin":133,"end":134},"obj":","},{"id":"T1298","span":{"begin":135,"end":138},"obj":"CC"},{"id":"T1299","span":{"begin":139,"end":150},"obj":"NNS"},{"id":"T1300","span":{"begin":151,"end":152},"obj":"-LRB-"},{"id":"T1301","span":{"begin":152,"end":157},"obj":"NNP"},{"id":"T1302","span":{"begin":158,"end":160},"obj":"FW"},{"id":"T1303","span":{"begin":161,"end":164},"obj":"FW"},{"id":"T1304","span":{"begin":164,"end":165},"obj":","},{"id":"T1305","span":{"begin":166,"end":170},"obj":"CD"},{"id":"T1306","span":{"begin":170,"end":171},"obj":"-RRB-"},{"id":"T1307","span":{"begin":171,"end":172},"obj":","},{"id":"T1308","span":{"begin":173,"end":176},"obj":"CC"},{"id":"T1309","span":{"begin":177,"end":181},"obj":"RB"},{"id":"T1310","span":{"begin":182,"end":184},"obj":"IN"},{"id":"T1311","span":{"begin":185,"end":188},"obj":"JJ"},{"id":"T1312","span":{"begin":189,"end":194},"obj":"NNS"},{"id":"T1313","span":{"begin":195,"end":196},"obj":"-LRB-"},{"id":"T1314","span":{"begin":196,"end":204},"obj":"NNP"},{"id":"T1315","span":{"begin":205,"end":207},"obj":"FW"},{"id":"T1316","span":{"begin":208,"end":211},"obj":"FW"},{"id":"T1317","span":{"begin":211,"end":212},"obj":","},{"id":"T1318","span":{"begin":213,"end":217},"obj":"CD"},{"id":"T1319","span":{"begin":217,"end":218},"obj":":"},{"id":"T1320","span":{"begin":219,"end":230},"obj":"NNP"},{"id":"T1321","span":{"begin":231,"end":233},"obj":"FW"},{"id":"T1322","span":{"begin":234,"end":237},"obj":"FW"},{"id":"T1323","span":{"begin":237,"end":238},"obj":","},{"id":"T1324","span":{"begin":239,"end":243},"obj":"CD"},{"id":"T1325","span":{"begin":243,"end":244},"obj":":"},{"id":"T1326","span":{"begin":245,"end":248},"obj":"NNP"},{"id":"T1327","span":{"begin":249,"end":254},"obj":"NNP"},{"id":"T1328","span":{"begin":255,"end":257},"obj":"FW"},{"id":"T1329","span":{"begin":258,"end":261},"obj":"FW"},{"id":"T1330","span":{"begin":261,"end":262},"obj":","},{"id":"T1331","span":{"begin":263,"end":267},"obj":"CD"},{"id":"T1332","span":{"begin":267,"end":268},"obj":":"},{"id":"T1333","span":{"begin":269,"end":275},"obj":"NNP"},{"id":"T1334","span":{"begin":276,"end":278},"obj":"FW"},{"id":"T1335","span":{"begin":279,"end":282},"obj":"FW"},{"id":"T1336","span":{"begin":282,"end":283},"obj":","},{"id":"T1337","span":{"begin":284,"end":288},"obj":"CD"},{"id":"T1338","span":{"begin":288,"end":289},"obj":":"},{"id":"T1339","span":{"begin":290,"end":298},"obj":"NNP"},{"id":"T1340","span":{"begin":299,"end":301},"obj":"FW"},{"id":"T1341","span":{"begin":302,"end":305},"obj":"FW"},{"id":"T1342","span":{"begin":305,"end":306},"obj":","},{"id":"T1343","span":{"begin":307,"end":311},"obj":"CD"},{"id":"T1344","span":{"begin":311,"end":312},"obj":":"},{"id":"T1345","span":{"begin":313,"end":323},"obj":"NNP"},{"id":"T1346","span":{"begin":324,"end":326},"obj":"FW"},{"id":"T1347","span":{"begin":327,"end":330},"obj":"FW"},{"id":"T1348","span":{"begin":330,"end":331},"obj":","},{"id":"T1349","span":{"begin":332,"end":336},"obj":"CD"},{"id":"T1350","span":{"begin":336,"end":337},"obj":"-RRB-"},{"id":"T1351","span":{"begin":338,"end":341},"obj":"CC"},{"id":"T1352","span":{"begin":342,"end":343},"obj":"-LRB-"},{"id":"T1353","span":{"begin":343,"end":351},"obj":"VBN"},{"id":"T1354","span":{"begin":352,"end":354},"obj":"IN"},{"id":"T1355","span":{"begin":355,"end":362},"obj":"NNP"}],"relations":[{"id":"R881","pred":"punct","subj":"T1261","obj":"T1276"},{"id":"R882","pred":"compound","subj":"T1262","obj":"T1264"},{"id":"R883","pred":"nmod","subj":"T1263","obj":"T1264"},{"id":"R884","pred":"ccomp","subj":"T1264","obj":"T1276"},{"id":"R885","pred":"punct","subj":"T1265","obj":"T1264"},{"id":"R886","pred":"npadvmod","subj":"T1266","obj":"T1264"},{"id":"R887","pred":"punct","subj":"T1267","obj":"T1276"},{"id":"R888","pred":"compound","subj":"T1268","obj":"T1270"},{"id":"R889","pred":"compound","subj":"T1269","obj":"T1270"},{"id":"R890","pred":"ccomp","subj":"T1270","obj":"T1276"},{"id":"R891","pred":"punct","subj":"T1271","obj":"T1270"},{"id":"R892","pred":"npadvmod","subj":"T1272","obj":"T1270"},{"id":"R893","pred":"punct","subj":"T1273","obj":"T1276"},{"id":"R894","pred":"compound","subj":"T1274","obj":"T1276"},{"id":"R895","pred":"nmod","subj":"T1275","obj":"T1276"},{"id":"R897","pred":"punct","subj":"T1277","obj":"T1276"},{"id":"R898","pred":"npadvmod","subj":"T1278","obj":"T1276"},{"id":"R899","pred":"punct","subj":"T1279","obj":"T1276"},{"id":"R901","pred":"nsubjpass","subj":"T1281","obj":"T1283"},{"id":"R902","pred":"auxpass","subj":"T1282","obj":"T1283"},{"id":"R904","pred":"agent","subj":"T1284","obj":"T1283"},{"id":"R905","pred":"compound","subj":"T1285","obj":"T1286"},{"id":"R906","pred":"nmod","subj":"T1286","obj":"T1289"},{"id":"R907","pred":"nummod","subj":"T1287","obj":"T1286"},{"id":"R908","pred":"punct","subj":"T1288","obj":"T1289"},{"id":"R909","pred":"pobj","subj":"T1289","obj":"T1284"},{"id":"R910","pred":"punct","subj":"T1290","obj":"T1289"},{"id":"R911","pred":"conj","subj":"T1291","obj":"T1289"},{"id":"R912","pred":"punct","subj":"T1292","obj":"T1289"},{"id":"R913","pred":"compound","subj":"T1293","obj":"T1294"},{"id":"R914","pred":"appos","subj":"T1294","obj":"T1289"},{"id":"R915","pred":"punct","subj":"T1295","obj":"T1289"},{"id":"R916","pred":"conj","subj":"T1296","obj":"T1289"},{"id":"R917","pred":"punct","subj":"T1297","obj":"T1296"},{"id":"R918","pred":"cc","subj":"T1298","obj":"T1296"},{"id":"R919","pred":"conj","subj":"T1299","obj":"T1296"},{"id":"R920","pred":"punct","subj":"T1300","obj":"T1303"},{"id":"R921","pred":"compound","subj":"T1301","obj":"T1303"},{"id":"R922","pred":"nmod","subj":"T1302","obj":"T1303"},{"id":"R923","pred":"parataxis","subj":"T1303","obj":"T1299"},{"id":"R924","pred":"punct","subj":"T1304","obj":"T1303"},{"id":"R925","pred":"npadvmod","subj":"T1305","obj":"T1303"},{"id":"R926","pred":"punct","subj":"T1306","obj":"T1303"},{"id":"R927","pred":"punct","subj":"T1307","obj":"T1299"},{"id":"R928","pred":"cc","subj":"T1308","obj":"T1299"},{"id":"R929","pred":"advmod","subj":"T1309","obj":"T1310"},{"id":"R930","pred":"agent","subj":"T1310","obj":"T1283"},{"id":"R931","pred":"amod","subj":"T1311","obj":"T1312"},{"id":"R932","pred":"pobj","subj":"T1312","obj":"T1310"},{"id":"R933","pred":"punct","subj":"T1313","obj":"T1316"},{"id":"R934","pred":"nmod","subj":"T1314","obj":"T1316"},{"id":"R935","pred":"nmod","subj":"T1315","obj":"T1316"},{"id":"R937","pred":"punct","subj":"T1317","obj":"T1316"},{"id":"R938","pred":"npadvmod","subj":"T1318","obj":"T1316"},{"id":"R939","pred":"punct","subj":"T1319","obj":"T1316"},{"id":"R940","pred":"compound","subj":"T1320","obj":"T1322"},{"id":"R941","pred":"compound","subj":"T1321","obj":"T1322"},{"id":"R942","pred":"compound","subj":"T1322","obj":"T1329"},{"id":"R943","pred":"punct","subj":"T1323","obj":"T1322"},{"id":"R944","pred":"npadvmod","subj":"T1324","obj":"T1322"},{"id":"R945","pred":"punct","subj":"T1325","obj":"T1322"},{"id":"R946","pred":"compound","subj":"T1326","obj":"T1327"},{"id":"R947","pred":"compound","subj":"T1327","obj":"T1329"},{"id":"R948","pred":"compound","subj":"T1328","obj":"T1329"},{"id":"R949","pred":"dep","subj":"T1329","obj":"T1316"},{"id":"R950","pred":"punct","subj":"T1330","obj":"T1329"},{"id":"R951","pred":"npadvmod","subj":"T1331","obj":"T1329"},{"id":"R953","pred":"compound","subj":"T1333","obj":"T1335"},{"id":"R954","pred":"compound","subj":"T1334","obj":"T1335"},{"id":"R956","pred":"punct","subj":"T1336","obj":"T1335"},{"id":"R957","pred":"npadvmod","subj":"T1337","obj":"T1335"},{"id":"R959","pred":"compound","subj":"T1339","obj":"T1341"},{"id":"R960","pred":"compound","subj":"T1340","obj":"T1341"},{"id":"R962","pred":"punct","subj":"T1342","obj":"T1341"},{"id":"R963","pred":"npadvmod","subj":"T1343","obj":"T1341"},{"id":"R965","pred":"compound","subj":"T1345","obj":"T1347"},{"id":"R966","pred":"compound","subj":"T1346","obj":"T1347"},{"id":"R968","pred":"punct","subj":"T1348","obj":"T1347"},{"id":"R969","pred":"npadvmod","subj":"T1349","obj":"T1347"},{"id":"R970","pred":"punct","subj":"T1350","obj":"T1347"},{"id":"R971","pred":"cc","subj":"T1351","obj":"T1347"},{"id":"R972","pred":"punct","subj":"T1352","obj":"T1353"},{"id":"R974","pred":"prep","subj":"T1354","obj":"T1353"},{"id":"R975","pred":"pobj","subj":"T1355","obj":"T1354"}],"text":"infection (Brooks et al., 2006; Ejrnaes et al., 2006; Moore et al., 2001). IL-10 is expressed by T helper 2 (Th2) cells, B cells, DCs, and macrophages (Moore et al., 2001), and also by Th1 cells (Anderson et al., 2007; Assenmacher et al., 1994; Del Prete et al., 1993; Gerosa et al., 1996; Jankovic et al., 2007; Pohl-Koppe et al., 1998) and (reviewed in O'Garra "}

{"project":"UBERON-AE","denotations":[{"id":"T1013","span":{"begin":245,"end":248},"obj":"http://purl.obolibrary.org/obo/UBERON_2000711"}],"text":"infection (Brooks et al., 2006; Ejrnaes et al., 2006; Moore et al., 2001). IL-10 is expressed by T helper 2 (Th2) cells, B cells, DCs, and macrophages (Moore et al., 2001), and also by Th1 cells (Anderson et al., 2007; Assenmacher et al., 1994; Del Prete et al., 1993; Gerosa et al., 1996; Jankovic et al., 2007; Pohl-Koppe et al., 1998) and (reviewed in O'Garra "}

{"project":"GO-MF","denotations":[{"id":"T2193","span":{"begin":75,"end":80},"obj":"http://purl.obolibrary.org/obo/GO_0005141"}],"text":"infection (Brooks et al., 2006; Ejrnaes et al., 2006; Moore et al., 2001). IL-10 is expressed by T helper 2 (Th2) cells, B cells, DCs, and macrophages (Moore et al., 2001), and also by Th1 cells (Anderson et al., 2007; Assenmacher et al., 1994; Del Prete et al., 1993; Gerosa et al., 1996; Jankovic et al., 2007; Pohl-Koppe et al., 1998) and (reviewed in O'Garra "}

{"project":"events-check-again","denotations":[{"id":"T2454","span":{"begin":75,"end":80},"obj":"Protein"},{"id":"T2455","span":{"begin":84,"end":93},"obj":"Gene_expression"}],"relations":[{"id":"R1888","pred":"themeOf","subj":"T2454","obj":"T2455"}],"text":"infection (Brooks et al., 2006; Ejrnaes et al., 2006; Moore et al., 2001). IL-10 is expressed by T helper 2 (Th2) cells, B cells, DCs, and macrophages (Moore et al., 2001), and also by Th1 cells (Anderson et al., 2007; Assenmacher et al., 1994; Del Prete et al., 1993; Gerosa et al., 1996; Jankovic et al., 2007; Pohl-Koppe et al., 1998) and (reviewed in O'Garra "}

{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2555","span":{"begin":75,"end":80},"obj":"Protein"},{"id":"T2556","span":{"begin":84,"end":93},"obj":"Gene_expression"}],"relations":[{"id":"R1931","pred":"themeOf","subj":"T2555","obj":"T2556"}],"text":"infection (Brooks et al., 2006; Ejrnaes et al., 2006; Moore et al., 2001). IL-10 is expressed by T helper 2 (Th2) cells, B cells, DCs, and macrophages (Moore et al., 2001), and also by Th1 cells (Anderson et al., 2007; Assenmacher et al., 1994; Del Prete et al., 1993; Gerosa et al., 1996; Jankovic et al., 2007; Pohl-Koppe et al., 1998) and (reviewed in O'Garra "}

{"project":"test2","denotations":[{"id":"T931","span":{"begin":75,"end":80},"obj":"Protein"},{"id":"T932","span":{"begin":84,"end":93},"obj":"Gene_expression"}],"relations":[{"id":"R689","pred":"themeOf","subj":"T931","obj":"T932"}],"text":"infection (Brooks et al., 2006; Ejrnaes et al., 2006; Moore et al., 2001). IL-10 is expressed by T helper 2 (Th2) cells, B cells, DCs, and macrophages (Moore et al., 2001), and also by Th1 cells (Anderson et al., 2007; Assenmacher et al., 1994; Del Prete et al., 1993; Gerosa et al., 1996; Jankovic et al., 2007; Pohl-Koppe et al., 1998) and (reviewed in O'Garra "}