PMC:2674207 / 21786-22326
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7611 | 0-13 | JJ | denotes | Densitometric |
T7612 | 14-22 | NN | denotes | Analysis |
T7613 | 23-35 | NN | denotes | Densitometry |
T7614 | 36-38 | IN | denotes | of |
T7615 | 39-42 | NN | denotes | ECL |
T7616 | 43-54 | NN | denotes | immunoblots |
T7617 | 55-58 | VB | denotes | was |
T7618 | 59-68 | VB | denotes | performed |
T7619 | 69-74 | VB | denotes | using |
T7620 | 75-83 | NNP | denotes | Gelworks |
T7621 | 84-86 | NNP | denotes | ID |
T7622 | 87-99 | JJ | denotes | intermediate |
T7623 | 100-108 | NN | denotes | software |
T7624 | 109-110 | -LRB- | denotes | ( |
T7625 | 110-121 | NNP | denotes | Ultraviolet |
T7626 | 122-130 | NNP | denotes | Products |
T7627 | 130-131 | -COMMA- | denotes | , |
T7628 | 132-146 | NNP | denotes | Cambridgeshire |
T7629 | 146-147 | -COMMA- | denotes | , |
T7630 | 148-150 | NNP | denotes | UK |
T7631 | 150-151 | -RRB- | denotes | ) |
T7632 | 153-160 | RB | denotes | Briefly |
T7633 | 160-161 | -COMMA- | denotes | , |
T7634 | 162-173 | NN | denotes | immunoblots |
T7635 | 174-178 | VB | denotes | were |
T7636 | 179-186 | VB | denotes | scanned |
T7637 | 187-190 | CC | denotes | and |
T7638 | 191-196 | NN | denotes | gates |
T7639 | 197-201 | VB | denotes | were |
T7640 | 202-207 | VB | denotes | drawn |
T7641 | 208-215 | RB | denotes | tightly |
T7642 | 216-222 | IN | denotes | around |
T7643 | 223-227 | DT | denotes | each |
T7644 | 228-232 | NN | denotes | band |
T7645 | 234-244 | NN | denotes | Background |
T7646 | 245-251 | NN | denotes | values |
T7647 | 252-256 | IN | denotes | from |
T7648 | 257-261 | DT | denotes | each |
T7649 | 262-266 | NN | denotes | lane |
T7650 | 267-271 | VB | denotes | were |
T7651 | 272-282 | VB | denotes | subtracted |
T7652 | 283-285 | TO | denotes | to |
T7653 | 286-295 | VB | denotes | normalize |
T7654 | 296-300 | DT | denotes | each |
T7655 | 301-312 | NN | denotes | measurement |
T7656 | 314-317 | DT | denotes | The |
T7657 | 318-323 | NN | denotes | bands |
T7658 | 324-328 | VB | denotes | were |
T7659 | 329-339 | VB | denotes | quantified |
T7660 | 340-345 | VB | denotes | using |
T7661 | 346-349 | DT | denotes | the |
T7662 | 350-358 | NNP | denotes | Gelworks |
T7663 | 359-367 | NN | denotes | software |
T7664 | 369-372 | DT | denotes | All |
T7665 | 373-380 | JJ | denotes | Western |
T7666 | 381-386 | NN | denotes | blots |
T7667 | 387-391 | VB | denotes | were |
T7668 | 392-399 | VB | denotes | exposed |
T7669 | 400-402 | TO | denotes | to |
T7670 | 403-407 | VB | denotes | film |
T7671 | 408-411 | IN | denotes | for |
T7672 | 412-419 | VB | denotes | varying |
T7673 | 420-427 | NN | denotes | lengths |
T7674 | 428-430 | IN | denotes | of |
T7675 | 431-435 | NN | denotes | time |
T7676 | 435-436 | -COMMA- | denotes | , |
T7677 | 437-440 | CC | denotes | and |
T7678 | 441-445 | RB | denotes | only |
T7679 | 446-451 | NN | denotes | films |
T7680 | 452-462 | VB | denotes | generating |
T7681 | 463-476 | JJ | denotes | subsaturating |
T7682 | 477-483 | NN | denotes | levels |
T7683 | 484-486 | IN | denotes | of |
T7684 | 487-496 | NN | denotes | intensity |
T7685 | 497-501 | VB | denotes | were |
T7686 | 502-510 | VB | denotes | selected |
T7687 | 511-514 | IN | denotes | for |
T7688 | 515-528 | JJ | denotes | densitometric |
T7689 | 529-539 | NN | denotes | evaluation |
R6533 | T7612 | T7611 | arg1Of | Analysis,Densitometric |
R6534 | T7613 | T7614 | arg1Of | Densitometry,of |
R6535 | T7613 | T7617 | arg1Of | Densitometry,was |
R6536 | T7613 | T7618 | arg2Of | Densitometry,performed |
R6537 | T7616 | T7614 | arg2Of | immunoblots,of |
R6538 | T7616 | T7615 | arg1Of | immunoblots,ECL |
R6539 | T7618 | T7617 | arg2Of | performed,was |
R6540 | T7619 | T7618 | arg3Of | using,performed |
R6541 | T7621 | T7620 | arg1Of | ID,Gelworks |
R6542 | T7623 | T7619 | arg2Of | software,using |
R6543 | T7623 | T7621 | arg1Of | software,ID |
R6544 | T7623 | T7622 | arg1Of | software,intermediate |
R6545 | T7623 | T7624 | arg1Of | software,( |
R6546 | T7626 | T7624 | arg2Of | Products,( |
R6547 | T7626 | T7625 | arg1Of | Products,Ultraviolet |
R6548 | T7626 | T7627 | arg1Of | Products,"," |
R6549 | T7628 | T7627 | arg2Of | Cambridgeshire,"," |
R6550 | T7628 | T7629 | arg1Of | Cambridgeshire,"," |
R6551 | T7630 | T7629 | arg2Of | UK,"," |
R6552 | T7631 | T7624 | arg3Of | ),( |
R6553 | T7634 | T7635 | arg1Of | immunoblots,were |
R6554 | T7634 | T7636 | arg2Of | immunoblots,scanned |
R6555 | T7636 | T7635 | arg2Of | scanned,were |
R6556 | T7636 | T7637 | arg1Of | scanned,and |
R6557 | T7637 | T7632 | arg1Of | and,Briefly |
R6558 | T7637 | T7633 | arg1Of | and,"," |
R6559 | T7638 | T7639 | arg1Of | gates,were |
R6560 | T7638 | T7640 | arg2Of | gates,drawn |
R6561 | T7640 | T7637 | arg2Of | drawn,and |
R6562 | T7640 | T7639 | arg2Of | drawn,were |
R6563 | T7640 | T7641 | arg1Of | drawn,tightly |
R6564 | T7640 | T7642 | arg1Of | drawn,around |
R6565 | T7644 | T7642 | arg2Of | band,around |
R6566 | T7644 | T7643 | arg1Of | band,each |
R6567 | T7646 | T7645 | arg1Of | values,Background |
R6568 | T7646 | T7647 | arg1Of | values,from |
R6572 | T7649 | T7647 | arg2Of | lane,from |
R6604 | T7679 | T7686 | arg2Of | films,selected |
R6605 | T7682 | T7680 | arg2Of | levels,generating |
R6606 | T7682 | T7681 | arg1Of | levels,subsaturating |
R6607 | T7682 | T7683 | arg1Of | levels,of |
R6608 | T7684 | T7683 | arg2Of | intensity,of |
R6609 | T7686 | T7677 | arg2Of | selected,and |
R6610 | T7686 | T7685 | arg2Of | selected,were |
R6611 | T7686 | T7687 | arg1Of | selected,for |
R6612 | T7689 | T7687 | arg2Of | evaluation,for |
R6613 | T7689 | T7688 | arg1Of | evaluation,densitometric |
R6569 | T7646 | T7650 | arg1Of | values,were |
R6570 | T7646 | T7651 | arg2Of | values,subtracted |
R6571 | T7646 | T7653 | arg1Of | values,normalize |
R6573 | T7649 | T7648 | arg1Of | lane,each |
R6574 | T7651 | T7650 | arg2Of | subtracted,were |
R6575 | T7653 | T7651 | arg3Of | normalize,subtracted |
R6576 | T7653 | T7652 | arg1Of | normalize,to |
R6577 | T7655 | T7653 | arg2Of | measurement,normalize |
R6578 | T7655 | T7654 | arg1Of | measurement,each |
R6579 | T7657 | T7656 | arg1Of | bands,The |
R6580 | T7657 | T7658 | arg1Of | bands,were |
R6581 | T7657 | T7659 | arg2Of | bands,quantified |
R6582 | T7659 | T7658 | arg2Of | quantified,were |
R6583 | T7660 | T7659 | arg3Of | using,quantified |
R6584 | T7663 | T7660 | arg2Of | software,using |
R6585 | T7663 | T7661 | arg1Of | software,the |
R6586 | T7663 | T7662 | arg1Of | software,Gelworks |
R6587 | T7666 | T7664 | arg1Of | blots,All |
R6588 | T7666 | T7665 | arg1Of | blots,Western |
R6589 | T7666 | T7667 | arg1Of | blots,were |
R6590 | T7666 | T7668 | arg2Of | blots,exposed |
R6591 | T7668 | T7667 | arg2Of | exposed,were |
R6592 | T7668 | T7669 | modOf | exposed,to |
R6593 | T7668 | T7677 | arg1Of | exposed,and |
R6594 | T7670 | T7669 | arg1Of | film,to |
R6595 | T7670 | T7671 | arg1Of | film,for |
R6596 | T7673 | T7671 | arg2Of | lengths,for |
R6597 | T7673 | T7672 | arg1Of | lengths,varying |
R6598 | T7673 | T7674 | arg1Of | lengths,of |
R6599 | T7675 | T7674 | arg2Of | time,of |
R6600 | T7677 | T7676 | arg1Of | and,"," |
R6601 | T7679 | T7678 | arg1Of | films,only |
R6602 | T7679 | T7680 | arg1Of | films,generating |
R6603 | T7679 | T7685 | arg1Of | films,were |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7691 | 0-13 | NNP | denotes | Densitometric |
T7692 | 14-22 | NNP | denotes | Analysis |
T7693 | 23-35 | NNP | denotes | Densitometry |
T7694 | 36-38 | IN | denotes | of |
T7695 | 39-42 | NNP | denotes | ECL |
T7696 | 43-54 | NNS | denotes | immunoblots |
T7697 | 55-58 | VBD | denotes | was |
T7698 | 59-68 | VBN | denotes | performed |
T7699 | 69-74 | VBG | denotes | using |
T7700 | 75-83 | NNP | denotes | Gelworks |
T7701 | 84-86 | NNP | denotes | ID |
T7702 | 87-99 | JJ | denotes | intermediate |
T7703 | 100-108 | NN | denotes | software |
T7704 | 109-110 | -LRB- | denotes | ( |
T7705 | 110-121 | NNP | denotes | Ultraviolet |
T7706 | 122-130 | NNPS | denotes | Products |
T7707 | 130-131 | , | denotes | , |
T7708 | 132-146 | NNP | denotes | Cambridgeshire |
T7709 | 146-147 | , | denotes | , |
T7710 | 148-150 | NNP | denotes | UK |
T7711 | 150-151 | -RRB- | denotes | ) |
T7712 | 151-152 | . | denotes | . |
T7713 | 153-160 | RB | denotes | Briefly |
T7714 | 160-161 | , | denotes | , |
T7715 | 162-173 | NNS | denotes | immunoblots |
T7716 | 174-178 | VBD | denotes | were |
T7717 | 179-186 | VBN | denotes | scanned |
T7718 | 187-190 | CC | denotes | and |
T7719 | 191-196 | NNS | denotes | gates |
T7720 | 197-201 | VBD | denotes | were |
T7721 | 202-207 | VBN | denotes | drawn |
T7722 | 208-215 | RB | denotes | tightly |
T7723 | 216-222 | IN | denotes | around |
T7724 | 223-227 | DT | denotes | each |
T7725 | 228-232 | NN | denotes | band |
T7726 | 232-233 | . | denotes | . |
T7727 | 234-244 | NN | denotes | Background |
T7728 | 245-251 | NNS | denotes | values |
T7729 | 252-256 | IN | denotes | from |
T7730 | 257-261 | DT | denotes | each |
T7731 | 262-266 | NN | denotes | lane |
T7732 | 267-271 | VBD | denotes | were |
T7733 | 272-282 | VBN | denotes | subtracted |
T7734 | 283-285 | TO | denotes | to |
T7735 | 286-295 | VB | denotes | normalize |
T7736 | 296-300 | DT | denotes | each |
T7737 | 301-312 | NN | denotes | measurement |
T7738 | 312-313 | . | denotes | . |
T7739 | 314-317 | DT | denotes | The |
T7740 | 318-323 | NNS | denotes | bands |
T7741 | 324-328 | VBD | denotes | were |
T7742 | 329-339 | VBN | denotes | quantified |
T7743 | 340-345 | VBG | denotes | using |
T7744 | 346-349 | DT | denotes | the |
T7745 | 350-358 | NNPS | denotes | Gelworks |
T7746 | 359-367 | NN | denotes | software |
T7747 | 367-368 | . | denotes | . |
T7748 | 369-372 | DT | denotes | All |
T7749 | 373-380 | JJ | denotes | Western |
T7750 | 381-386 | NNS | denotes | blots |
T7751 | 387-391 | VBD | denotes | were |
T7752 | 392-399 | VBN | denotes | exposed |
T7753 | 400-402 | TO | denotes | to |
T7754 | 403-407 | NN | denotes | film |
T7755 | 408-411 | IN | denotes | for |
T7756 | 412-419 | VBG | denotes | varying |
T7757 | 420-427 | NNS | denotes | lengths |
T7758 | 428-430 | IN | denotes | of |
T7759 | 431-435 | NN | denotes | time |
T7760 | 435-436 | , | denotes | , |
T7761 | 437-440 | CC | denotes | and |
T7762 | 441-445 | RB | denotes | only |
T7763 | 446-451 | NNS | denotes | films |
T7764 | 452-462 | VBG | denotes | generating |
T7765 | 463-476 | JJ | denotes | subsaturating |
T7766 | 477-483 | NNS | denotes | levels |
T7767 | 484-486 | IN | denotes | of |
T7768 | 487-496 | NN | denotes | intensity |
T7769 | 497-501 | VBD | denotes | were |
T7770 | 502-510 | VBN | denotes | selected |
T7771 | 511-514 | IN | denotes | for |
T7772 | 515-528 | JJ | denotes | densitometric |
T7773 | 529-539 | NN | denotes | evaluation |
T7774 | 539-540 | . | denotes | . |
R6614 | T7691 | T7693 | compound | Densitometric,Densitometry |
R6615 | T7692 | T7693 | compound | Analysis,Densitometry |
R6616 | T7693 | T7698 | nsubjpass | Densitometry,performed |
R6617 | T7694 | T7693 | prep | of,Densitometry |
R6618 | T7695 | T7696 | compound | ECL,immunoblots |
R6619 | T7696 | T7694 | pobj | immunoblots,of |
R6620 | T7697 | T7698 | auxpass | was,performed |
R6621 | T7698 | T7698 | ROOT | performed,performed |
R6622 | T7699 | T7698 | advcl | using,performed |
R6623 | T7700 | T7703 | nmod | Gelworks,software |
R6624 | T7701 | T7703 | nmod | ID,software |
R6625 | T7702 | T7703 | amod | intermediate,software |
R6626 | T7703 | T7699 | dobj | software,using |
R6627 | T7704 | T7706 | punct | (,Products |
R6628 | T7705 | T7706 | compound | Ultraviolet,Products |
R6629 | T7706 | T7703 | appos | Products,software |
R6630 | T7707 | T7706 | punct | ",",Products |
R6631 | T7708 | T7706 | conj | Cambridgeshire,Products |
R6632 | T7709 | T7708 | punct | ",",Cambridgeshire |
R6633 | T7710 | T7708 | appos | UK,Cambridgeshire |
R6634 | T7711 | T7708 | punct | ),Cambridgeshire |
R6635 | T7712 | T7698 | punct | .,performed |
R6636 | T7713 | T7717 | advmod | Briefly,scanned |
R6637 | T7714 | T7717 | punct | ",",scanned |
R6638 | T7715 | T7717 | nsubjpass | immunoblots,scanned |
R6639 | T7716 | T7717 | auxpass | were,scanned |
R6640 | T7717 | T7717 | ROOT | scanned,scanned |
R6641 | T7718 | T7717 | cc | and,scanned |
R6642 | T7719 | T7721 | nsubjpass | gates,drawn |
R6643 | T7720 | T7721 | auxpass | were,drawn |
R6644 | T7721 | T7717 | conj | drawn,scanned |
R6645 | T7722 | T7721 | advmod | tightly,drawn |
R6646 | T7723 | T7721 | prep | around,drawn |
R6647 | T7724 | T7725 | det | each,band |
R6648 | T7725 | T7723 | pobj | band,around |
R6649 | T7726 | T7721 | punct | .,drawn |
R6650 | T7727 | T7728 | compound | Background,values |
R6651 | T7728 | T7733 | nsubjpass | values,subtracted |
R6652 | T7729 | T7728 | prep | from,values |
R6653 | T7730 | T7731 | det | each,lane |
R6654 | T7731 | T7729 | pobj | lane,from |
R6655 | T7732 | T7733 | auxpass | were,subtracted |
R6656 | T7733 | T7733 | ROOT | subtracted,subtracted |
R6657 | T7734 | T7735 | aux | to,normalize |
R6658 | T7735 | T7733 | xcomp | normalize,subtracted |
R6659 | T7736 | T7737 | det | each,measurement |
R6660 | T7737 | T7735 | dobj | measurement,normalize |
R6661 | T7738 | T7733 | punct | .,subtracted |
R6662 | T7739 | T7740 | det | The,bands |
R6663 | T7740 | T7742 | nsubjpass | bands,quantified |
R6664 | T7741 | T7742 | auxpass | were,quantified |
R6665 | T7742 | T7742 | ROOT | quantified,quantified |
R6666 | T7743 | T7742 | advcl | using,quantified |
R6667 | T7744 | T7746 | det | the,software |
R6668 | T7745 | T7746 | compound | Gelworks,software |
R6669 | T7746 | T7743 | dobj | software,using |
R6670 | T7747 | T7742 | punct | .,quantified |
R6671 | T7748 | T7750 | det | All,blots |
R6672 | T7749 | T7750 | amod | Western,blots |
R6673 | T7750 | T7752 | nsubjpass | blots,exposed |
R6674 | T7751 | T7752 | auxpass | were,exposed |
R6675 | T7752 | T7752 | ROOT | exposed,exposed |
R6676 | T7753 | T7752 | prep | to,exposed |
R6677 | T7754 | T7753 | pobj | film,to |
R6678 | T7755 | T7754 | prep | for,film |
R6679 | T7756 | T7757 | amod | varying,lengths |
R6680 | T7757 | T7755 | pobj | lengths,for |
R6681 | T7758 | T7757 | prep | of,lengths |
R6682 | T7759 | T7758 | pobj | time,of |
R6683 | T7760 | T7752 | punct | ",",exposed |
R6684 | T7761 | T7752 | cc | and,exposed |
R6685 | T7762 | T7763 | advmod | only,films |
R6686 | T7763 | T7770 | nsubjpass | films,selected |
R6687 | T7764 | T7763 | acl | generating,films |
R6688 | T7765 | T7766 | amod | subsaturating,levels |
R6689 | T7766 | T7764 | dobj | levels,generating |
R6690 | T7767 | T7766 | prep | of,levels |
R6691 | T7768 | T7767 | pobj | intensity,of |
R6692 | T7769 | T7770 | auxpass | were,selected |
R6693 | T7770 | T7752 | conj | selected,exposed |
R6694 | T7771 | T7770 | prep | for,selected |
R6695 | T7772 | T7773 | amod | densitometric,evaluation |
R6696 | T7773 | T7771 | pobj | evaluation,for |
R6697 | T7774 | T7770 | punct | .,selected |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7605 | 0-22 | Sentence | denotes | Densitometric Analysis |
T7606 | 23-152 | Sentence | denotes | Densitometry of ECL immunoblots was performed using Gelworks ID intermediate software (Ultraviolet Products, Cambridgeshire, UK). |
T7607 | 153-233 | Sentence | denotes | Briefly, immunoblots were scanned and gates were drawn tightly around each band. |
T7608 | 234-313 | Sentence | denotes | Background values from each lane were subtracted to normalize each measurement. |
T7609 | 314-368 | Sentence | denotes | The bands were quantified using the Gelworks software. |
T7610 | 369-540 | Sentence | denotes | All Western blots were exposed to film for varying lengths of time, and only films generating subsaturating levels of intensity were selected for densitometric evaluation. |
T154 | 0-22 | Sentence | denotes | Densitometric Analysis |
T155 | 23-152 | Sentence | denotes | Densitometry of ECL immunoblots was performed using Gelworks ID intermediate software (Ultraviolet Products, Cambridgeshire, UK). |
T156 | 153-233 | Sentence | denotes | Briefly, immunoblots were scanned and gates were drawn tightly around each band. |
T157 | 234-313 | Sentence | denotes | Background values from each lane were subtracted to normalize each measurement. |
T158 | 314-368 | Sentence | denotes | The bands were quantified using the Gelworks software. |
T159 | 369-540 | Sentence | denotes | All Western blots were exposed to film for varying lengths of time, and only films generating subsaturating levels of intensity were selected for densitometric evaluation. |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7690 | 84-86 | P41134 | denotes | ID |