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PMC:2664230 / 14591-14719 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T6489 36-39 Protein denotes p65
T6490 40-55 Phosphorylation denotes phosphorylation
T6491 60-69 Positive_regulation denotes increased
T6492 70-79 Positive_regulation denotes following
R5374 T6489 T6490 themeOf p65,phosphorylation
R5375 T6490 T6491 themeOf phosphorylation,increased
R5376 T6491 T6492 themeOf increased,following

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6769 0-2 IN denotes In
T6770 3-4 DT denotes a
T6771 5-12 JJ denotes similar
T6772 13-20 NN denotes fashion
T6773 20-21 -COMMA- denotes ,
T6774 22-29 JJ denotes nuclear
T6775 30-35 NN denotes NF-κB
T6776 36-39 NN denotes p65
T6777 40-55 NN denotes phosphorylation
T6778 56-59 VB denotes was
T6779 60-69 VB denotes increased
T6780 70-79 VB denotes following
T6781 80-83 NN denotes LPS
T6782 84-95 NN denotes stimulation
T6783 96-97 -LRB- denotes (
T6784 97-100 CD denotes 100
T6785 101-102 SYM denotes ±
T6786 103-104 CD denotes 0
T6787 105-108 IN denotes vs.
T6788 109-111 CD denotes 38
T6789 112-113 CC denotes ±
T6790 114-116 CD denotes 20
T6791 116-117 -COLON- denotes ;
T6792 118-119 NN denotes P
T6793 120-121 SYM denotes <
T6794 122-126 CD denotes 0.01
T6795 126-127 -RRB- denotes )
R5643 T6772 T6769 arg2Of fashion,In
R5644 T6772 T6770 arg1Of fashion,a
R5645 T6772 T6771 arg1Of fashion,similar
R5646 T6777 T6774 arg1Of phosphorylation,nuclear
R5647 T6777 T6775 arg1Of phosphorylation,NF-κB
R5648 T6777 T6776 arg1Of phosphorylation,p65
R5649 T6777 T6778 arg1Of phosphorylation,was
R5650 T6777 T6779 arg2Of phosphorylation,increased
R5651 T6779 T6769 arg1Of increased,In
R5652 T6779 T6773 arg1Of increased,","
R5653 T6779 T6778 arg2Of increased,was
R5654 T6779 T6780 arg1Of increased,following
R5655 T6782 T6780 arg2Of stimulation,following
R5656 T6782 T6781 arg1Of stimulation,LPS
R5657 T6782 T6783 arg1Of stimulation,(
R5658 T6786 T6783 arg2Of 0,(
R5659 T6786 T6784 arg1Of 0,100
R5660 T6786 T6785 arg1Of 0,±
R5661 T6786 T6787 arg1Of 0,vs.
R5662 T6786 T6791 arg1Of 0,;
R5663 T6788 T6789 arg1Of 38,±
R5664 T6789 T6787 arg2Of ±,vs.
R5665 T6790 T6789 arg2Of 20,±
R5666 T6792 T6791 arg2Of P,;
R5667 T6792 T6793 arg1Of P,<
R5668 T6792 T6794 arg1Of P,0.01
R5669 T6795 T6783 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6580 0-2 IN denotes In
T6581 3-4 DT denotes a
T6582 5-12 JJ denotes similar
T6583 13-20 NN denotes fashion
T6584 20-21 , denotes ,
T6585 22-29 JJ denotes nuclear
T6586 30-35 NNP denotes NF-κB
T6587 36-39 CD denotes p65
T6588 40-55 NN denotes phosphorylation
T6589 56-59 VBD denotes was
T6590 60-69 VBN denotes increased
T6591 70-79 VBG denotes following
T6592 80-83 NNP denotes LPS
T6593 84-95 NN denotes stimulation
T6594 96-97 -LRB- denotes (
T6595 97-100 CD denotes 100
T6596 101-102 CD denotes ±
T6597 103-104 CD denotes 0
T6598 105-108 IN denotes vs.
T6599 109-111 CD denotes 38
T6600 112-113 CD denotes ±
T6601 114-116 CD denotes 20
T6602 116-117 : denotes ;
T6603 118-119 NNP denotes P
T6604 120-121 NNP denotes <
T6605 122-126 CD denotes 0.01
T6606 126-127 -RRB- denotes )
T6607 127-128 . denotes .
R5455 T6580 T6590 prep In,increased
R5456 T6581 T6583 det a,fashion
R5457 T6582 T6583 amod similar,fashion
R5458 T6583 T6580 pobj fashion,In
R5459 T6584 T6590 punct ",",increased
R5460 T6585 T6588 amod nuclear,phosphorylation
R5461 T6586 T6588 nmod NF-κB,phosphorylation
R5462 T6587 T6588 nummod p65,phosphorylation
R5463 T6588 T6590 nsubjpass phosphorylation,increased
R5464 T6589 T6590 auxpass was,increased
R5465 T6590 T6590 ROOT increased,increased
R5466 T6591 T6590 prep following,increased
R5467 T6592 T6593 compound LPS,stimulation
R5468 T6593 T6591 pobj stimulation,following
R5469 T6594 T6597 punct (,0
R5470 T6595 T6597 nummod 100,0
R5471 T6596 T6597 nummod ±,0
R5472 T6597 T6590 npadvmod 0,increased
R5473 T6598 T6597 prep vs.,0
R5474 T6599 T6601 nummod 38,20
R5475 T6600 T6601 nummod ±,20
R5476 T6601 T6598 pobj 20,vs.
R5477 T6602 T6605 punct ;,0.01
R5478 T6603 T6604 compound P,<
R5479 T6604 T6605 compound <,0.01
R5480 T6605 T6590 npadvmod 0.01,increased
R5481 T6606 T6605 punct ),0.01
R5482 T6607 T6590 punct .,increased

GO-BP

Id Subject Object Predicate Lexical cue
T6895 40-55 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

sentences

Id Subject Object Predicate Lexical cue
T6501 0-128 Sentence denotes In a similar fashion, nuclear NF-κB p65 phosphorylation was increased following LPS stimulation (100 ± 0 vs. 38 ± 20; P < 0.01).
T113 0-128 Sentence denotes In a similar fashion, nuclear NF-κB p65 phosphorylation was increased following LPS stimulation (100 ± 0 vs. 38 ± 20; P < 0.01).

events-check-again

Id Subject Object Predicate Lexical cue
T6942 36-39 Protein denotes p65
T6943 40-55 Phosphorylation denotes phosphorylation
T6944 60-69 Positive_regulation denotes increased
T6945 70-79 Positive_regulation denotes following
R5776 T6942 T6943 themeOf p65,phosphorylation
R5777 T6943 T6944 themeOf phosphorylation,increased
R5778 T6944 T6945 themeOf increased,following

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T6971 36-39 Protein denotes p65
T6972 22-29 Entity denotes nuclear
T6973 40-55 Phosphorylation denotes phosphorylation
T6974 60-69 Positive_regulation denotes increased
R5798 T6971 T6973 themeOf p65,phosphorylation
R5799 T6972 T6973 Site nuclear,phosphorylation
R5800 T6973 T6974 themeOf phosphorylation,increased

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6880 36-39 Q04206 denotes p65
T6881 36-39 P21579 denotes p65

test2

Id Subject Object Predicate Lexical cue
T6466 36-39 Protein denotes p65
T6467 40-55 Phosphorylation denotes phosphorylation
T6468 60-69 Positive_regulation denotes increased
T6469 70-79 Positive_regulation denotes following
R5358 T6466 T6467 themeOf p65,phosphorylation
R5359 T6467 T6468 themeOf phosphorylation,increased
R5360 T6468 T6469 themeOf increased,following