PMC:2664230 / 14591-14719 JSONTXT

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    bionlp-st-ge-2016-reference

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    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T6769","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T6770","span":{"begin":3,"end":4},"obj":"DT"},{"id":"T6771","span":{"begin":5,"end":12},"obj":"JJ"},{"id":"T6772","span":{"begin":13,"end":20},"obj":"NN"},{"id":"T6773","span":{"begin":20,"end":21},"obj":"-COMMA-"},{"id":"T6774","span":{"begin":22,"end":29},"obj":"JJ"},{"id":"T6775","span":{"begin":30,"end":35},"obj":"NN"},{"id":"T6776","span":{"begin":36,"end":39},"obj":"NN"},{"id":"T6777","span":{"begin":40,"end":55},"obj":"NN"},{"id":"T6778","span":{"begin":56,"end":59},"obj":"VB"},{"id":"T6779","span":{"begin":60,"end":69},"obj":"VB"},{"id":"T6780","span":{"begin":70,"end":79},"obj":"VB"},{"id":"T6781","span":{"begin":80,"end":83},"obj":"NN"},{"id":"T6782","span":{"begin":84,"end":95},"obj":"NN"},{"id":"T6783","span":{"begin":96,"end":97},"obj":"-LRB-"},{"id":"T6784","span":{"begin":97,"end":100},"obj":"CD"},{"id":"T6785","span":{"begin":101,"end":102},"obj":"SYM"},{"id":"T6786","span":{"begin":103,"end":104},"obj":"CD"},{"id":"T6787","span":{"begin":105,"end":108},"obj":"IN"},{"id":"T6788","span":{"begin":109,"end":111},"obj":"CD"},{"id":"T6789","span":{"begin":112,"end":113},"obj":"CC"},{"id":"T6790","span":{"begin":114,"end":116},"obj":"CD"},{"id":"T6791","span":{"begin":116,"end":117},"obj":"-COLON-"},{"id":"T6792","span":{"begin":118,"end":119},"obj":"NN"},{"id":"T6793","span":{"begin":120,"end":121},"obj":"SYM"},{"id":"T6794","span":{"begin":122,"end":126},"obj":"CD"},{"id":"T6795","span":{"begin":126,"end":127},"obj":"-RRB-"}],"relations":[{"id":"R5643","pred":"arg2Of","subj":"T6772","obj":"T6769"},{"id":"R5644","pred":"arg1Of","subj":"T6772","obj":"T6770"},{"id":"R5645","pred":"arg1Of","subj":"T6772","obj":"T6771"},{"id":"R5646","pred":"arg1Of","subj":"T6777","obj":"T6774"},{"id":"R5647","pred":"arg1Of","subj":"T6777","obj":"T6775"},{"id":"R5648","pred":"arg1Of","subj":"T6777","obj":"T6776"},{"id":"R5649","pred":"arg1Of","subj":"T6777","obj":"T6778"},{"id":"R5650","pred":"arg2Of","subj":"T6777","obj":"T6779"},{"id":"R5651","pred":"arg1Of","subj":"T6779","obj":"T6769"},{"id":"R5652","pred":"arg1Of","subj":"T6779","obj":"T6773"},{"id":"R5653","pred":"arg2Of","subj":"T6779","obj":"T6778"},{"id":"R5654","pred":"arg1Of","subj":"T6779","obj":"T6780"},{"id":"R5655","pred":"arg2Of","subj":"T6782","obj":"T6780"},{"id":"R5656","pred":"arg1Of","subj":"T6782","obj":"T6781"},{"id":"R5657","pred":"arg1Of","subj":"T6782","obj":"T6783"},{"id":"R5658","pred":"arg2Of","subj":"T6786","obj":"T6783"},{"id":"R5659","pred":"arg1Of","subj":"T6786","obj":"T6784"},{"id":"R5660","pred":"arg1Of","subj":"T6786","obj":"T6785"},{"id":"R5661","pred":"arg1Of","subj":"T6786","obj":"T6787"},{"id":"R5662","pred":"arg1Of","subj":"T6786","obj":"T6791"},{"id":"R5663","pred":"arg1Of","subj":"T6788","obj":"T6789"},{"id":"R5664","pred":"arg2Of","subj":"T6789","obj":"T6787"},{"id":"R5665","pred":"arg2Of","subj":"T6790","obj":"T6789"},{"id":"R5666","pred":"arg2Of","subj":"T6792","obj":"T6791"},{"id":"R5667","pred":"arg1Of","subj":"T6792","obj":"T6793"},{"id":"R5668","pred":"arg1Of","subj":"T6792","obj":"T6794"},{"id":"R5669","pred":"arg3Of","subj":"T6795","obj":"T6783"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"In a similar fashion, nuclear NF-κB p65 phosphorylation was increased following LPS stimulation (100 ± 0 vs. 38 ± 20; P \u003c 0.01)."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T6580","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T6581","span":{"begin":3,"end":4},"obj":"DT"},{"id":"T6582","span":{"begin":5,"end":12},"obj":"JJ"},{"id":"T6583","span":{"begin":13,"end":20},"obj":"NN"},{"id":"T6584","span":{"begin":20,"end":21},"obj":","},{"id":"T6585","span":{"begin":22,"end":29},"obj":"JJ"},{"id":"T6586","span":{"begin":30,"end":35},"obj":"NNP"},{"id":"T6587","span":{"begin":36,"end":39},"obj":"CD"},{"id":"T6588","span":{"begin":40,"end":55},"obj":"NN"},{"id":"T6589","span":{"begin":56,"end":59},"obj":"VBD"},{"id":"T6590","span":{"begin":60,"end":69},"obj":"VBN"},{"id":"T6591","span":{"begin":70,"end":79},"obj":"VBG"},{"id":"T6592","span":{"begin":80,"end":83},"obj":"NNP"},{"id":"T6593","span":{"begin":84,"end":95},"obj":"NN"},{"id":"T6594","span":{"begin":96,"end":97},"obj":"-LRB-"},{"id":"T6595","span":{"begin":97,"end":100},"obj":"CD"},{"id":"T6596","span":{"begin":101,"end":102},"obj":"CD"},{"id":"T6597","span":{"begin":103,"end":104},"obj":"CD"},{"id":"T6598","span":{"begin":105,"end":108},"obj":"IN"},{"id":"T6599","span":{"begin":109,"end":111},"obj":"CD"},{"id":"T6600","span":{"begin":112,"end":113},"obj":"CD"},{"id":"T6601","span":{"begin":114,"end":116},"obj":"CD"},{"id":"T6602","span":{"begin":116,"end":117},"obj":":"},{"id":"T6603","span":{"begin":118,"end":119},"obj":"NNP"},{"id":"T6604","span":{"begin":120,"end":121},"obj":"NNP"},{"id":"T6605","span":{"begin":122,"end":126},"obj":"CD"},{"id":"T6606","span":{"begin":126,"end":127},"obj":"-RRB-"},{"id":"T6607","span":{"begin":127,"end":128},"obj":"."}],"relations":[{"id":"R5455","pred":"prep","subj":"T6580","obj":"T6590"},{"id":"R5456","pred":"det","subj":"T6581","obj":"T6583"},{"id":"R5457","pred":"amod","subj":"T6582","obj":"T6583"},{"id":"R5458","pred":"pobj","subj":"T6583","obj":"T6580"},{"id":"R5459","pred":"punct","subj":"T6584","obj":"T6590"},{"id":"R5460","pred":"amod","subj":"T6585","obj":"T6588"},{"id":"R5461","pred":"nmod","subj":"T6586","obj":"T6588"},{"id":"R5462","pred":"nummod","subj":"T6587","obj":"T6588"},{"id":"R5463","pred":"nsubjpass","subj":"T6588","obj":"T6590"},{"id":"R5464","pred":"auxpass","subj":"T6589","obj":"T6590"},{"id":"R5465","pred":"ROOT","subj":"T6590","obj":"T6590"},{"id":"R5466","pred":"prep","subj":"T6591","obj":"T6590"},{"id":"R5467","pred":"compound","subj":"T6592","obj":"T6593"},{"id":"R5468","pred":"pobj","subj":"T6593","obj":"T6591"},{"id":"R5469","pred":"punct","subj":"T6594","obj":"T6597"},{"id":"R5470","pred":"nummod","subj":"T6595","obj":"T6597"},{"id":"R5471","pred":"nummod","subj":"T6596","obj":"T6597"},{"id":"R5472","pred":"npadvmod","subj":"T6597","obj":"T6590"},{"id":"R5473","pred":"prep","subj":"T6598","obj":"T6597"},{"id":"R5474","pred":"nummod","subj":"T6599","obj":"T6601"},{"id":"R5475","pred":"nummod","subj":"T6600","obj":"T6601"},{"id":"R5476","pred":"pobj","subj":"T6601","obj":"T6598"},{"id":"R5477","pred":"punct","subj":"T6602","obj":"T6605"},{"id":"R5478","pred":"compound","subj":"T6603","obj":"T6604"},{"id":"R5479","pred":"compound","subj":"T6604","obj":"T6605"},{"id":"R5480","pred":"npadvmod","subj":"T6605","obj":"T6590"},{"id":"R5481","pred":"punct","subj":"T6606","obj":"T6605"},{"id":"R5482","pred":"punct","subj":"T6607","obj":"T6590"}],"text":"In a similar fashion, nuclear NF-κB p65 phosphorylation was increased following LPS stimulation (100 ± 0 vs. 38 ± 20; P \u003c 0.01)."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T6895","span":{"begin":40,"end":55},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"In a similar fashion, nuclear NF-κB p65 phosphorylation was increased following LPS stimulation (100 ± 0 vs. 38 ± 20; P \u003c 0.01)."}

    sentences

    {"project":"sentences","denotations":[{"id":"T6501","span":{"begin":0,"end":128},"obj":"Sentence"},{"id":"T113","span":{"begin":0,"end":128},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In a similar fashion, nuclear NF-κB p65 phosphorylation was increased following LPS stimulation (100 ± 0 vs. 38 ± 20; P \u003c 0.01)."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T6942","span":{"begin":36,"end":39},"obj":"Protein"},{"id":"T6943","span":{"begin":40,"end":55},"obj":"Phosphorylation"},{"id":"T6944","span":{"begin":60,"end":69},"obj":"Positive_regulation"},{"id":"T6945","span":{"begin":70,"end":79},"obj":"Positive_regulation"}],"relations":[{"id":"R5776","pred":"themeOf","subj":"T6942","obj":"T6943"},{"id":"R5777","pred":"themeOf","subj":"T6943","obj":"T6944"},{"id":"R5778","pred":"themeOf","subj":"T6944","obj":"T6945"}],"text":"In a similar fashion, nuclear NF-κB p65 phosphorylation was increased following LPS stimulation (100 ± 0 vs. 38 ± 20; P \u003c 0.01)."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T6971","span":{"begin":36,"end":39},"obj":"Protein"},{"id":"T6972","span":{"begin":22,"end":29},"obj":"Entity"},{"id":"T6973","span":{"begin":40,"end":55},"obj":"Phosphorylation"},{"id":"T6974","span":{"begin":60,"end":69},"obj":"Positive_regulation"}],"relations":[{"id":"R5798","pred":"themeOf","subj":"T6971","obj":"T6973"},{"id":"R5799","pred":"Site","subj":"T6972","obj":"T6973"},{"id":"R5800","pred":"themeOf","subj":"T6973","obj":"T6974"}],"text":"In a similar fashion, nuclear NF-κB p65 phosphorylation was increased following LPS stimulation (100 ± 0 vs. 38 ± 20; P \u003c 0.01)."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T6880","span":{"begin":36,"end":39},"obj":"Q04206"},{"id":"T6881","span":{"begin":36,"end":39},"obj":"P21579"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"In a similar fashion, nuclear NF-κB p65 phosphorylation was increased following LPS stimulation (100 ± 0 vs. 38 ± 20; P \u003c 0.01)."}

    test2

    {"project":"test2","denotations":[{"id":"T6466","span":{"begin":36,"end":39},"obj":"Protein"},{"id":"T6467","span":{"begin":40,"end":55},"obj":"Phosphorylation"},{"id":"T6468","span":{"begin":60,"end":69},"obj":"Positive_regulation"},{"id":"T6469","span":{"begin":70,"end":79},"obj":"Positive_regulation"}],"relations":[{"id":"R5358","pred":"themeOf","subj":"T6466","obj":"T6467"},{"id":"R5359","pred":"themeOf","subj":"T6467","obj":"T6468"},{"id":"R5360","pred":"themeOf","subj":"T6468","obj":"T6469"}],"text":"In a similar fashion, nuclear NF-κB p65 phosphorylation was increased following LPS stimulation (100 ± 0 vs. 38 ± 20; P \u003c 0.01)."}