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PMC:2664230 / 12589-12807 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T5627 31-36 Protein denotes TNF-α
T5628 37-47 Gene_expression denotes production
T5629 77-88 Regulation denotes involvement
T5630 96-107 Negative_regulation denotes attenuation
T5631 115-122 Positive_regulation denotes induced
T5632 123-128 Protein denotes TNF-α
T5633 129-139 Gene_expression denotes production
T5626 16-20 Regulation denotes role
R4670 T5627 T5628 themeOf TNF-α,production
R4671 T5628 T5626 themeOf production,role
R4672 T5630 T5629 themeOf attenuation,involvement
R4673 T5631 T5630 themeOf induced,attenuation
R4674 T5632 T5633 themeOf TNF-α,production
R4675 T5633 T5631 themeOf production,induced

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5808 0-2 TO denotes To
T5809 3-11 VB denotes evaluate
T5810 12-15 DT denotes the
T5811 16-20 NN denotes role
T5812 21-23 IN denotes of
T5813 24-27 NN denotes PKA
T5814 28-30 IN denotes on
T5815 31-36 NN denotes TNF-α
T5816 37-47 NN denotes production
T5817 48-50 IN denotes in
T5818 51-62 JJ denotes mononuclear
T5819 63-68 NN denotes cells
T5820 69-72 CC denotes and
T5821 73-76 PRP-DOLLAR- denotes its
T5822 77-88 NN denotes involvement
T5823 89-91 IN denotes in
T5824 92-95 DT denotes the
T5825 96-107 NN denotes attenuation
T5826 108-110 IN denotes of
T5827 111-122 JJ denotes LPS-induced
T5828 123-128 NN denotes TNF-α
T5829 129-139 NN denotes production
T5830 140-148 VB denotes observed
T5831 149-158 VB denotes following
T5832 159-162 NN denotes PTX
T5833 163-172 NN denotes treatment
T5834 172-173 -COMMA- denotes ,
T5835 174-177 NN denotes H89
T5836 177-178 -COMMA- denotes ,
T5837 179-180 DT denotes a
T5838 181-189 JJ denotes specific
T5839 190-193 NN denotes PKA
T5840 194-203 NN denotes inhibitor
T5841 203-204 -COMMA- denotes ,
T5842 205-208 VB denotes was
T5843 209-217 VB denotes utilized
R4839 T5809 T5808 arg1Of evaluate,To
R4840 T5809 T5842 arg1Of evaluate,was
R4841 T5809 T5843 arg2Of evaluate,utilized
R4842 T5811 T5810 arg1Of role,the
R4843 T5811 T5812 arg1Of role,of
R4844 T5811 T5814 arg1Of role,on
R4845 T5811 T5817 arg1Of role,in
R4846 T5811 T5820 arg1Of role,and
R4847 T5813 T5812 arg2Of PKA,of
R4848 T5816 T5814 arg2Of production,on
R4849 T5816 T5815 arg1Of production,TNF-α
R4850 T5819 T5817 arg2Of cells,in
R4851 T5819 T5818 arg1Of cells,mononuclear
R4852 T5820 T5809 arg2Of and,evaluate
R4853 T5822 T5820 arg2Of involvement,and
R4854 T5822 T5821 arg1Of involvement,its
R4855 T5822 T5823 arg1Of involvement,in
R4856 T5825 T5823 arg2Of attenuation,in
R4857 T5825 T5824 arg1Of attenuation,the
R4858 T5825 T5826 arg1Of attenuation,of
R4859 T5829 T5826 arg2Of production,of
R4860 T5829 T5827 arg1Of production,LPS-induced
R4861 T5829 T5828 arg1Of production,TNF-α
R4862 T5829 T5830 arg2Of production,observed
R4863 T5830 T5831 arg1Of observed,following
R4864 T5833 T5831 arg2Of treatment,following
R4865 T5833 T5832 arg1Of treatment,PTX
R4866 T5833 T5834 arg1Of treatment,","
R4867 T5833 T5836 arg1Of treatment,","
R4868 T5835 T5834 arg2Of H89,","
R4869 T5840 T5836 arg2Of inhibitor,","
R4870 T5840 T5837 arg1Of inhibitor,a
R4871 T5840 T5838 arg1Of inhibitor,specific
R4872 T5840 T5839 arg1Of inhibitor,PKA
R4873 T5843 T5841 arg1Of utilized,","
R4874 T5843 T5842 arg2Of utilized,was

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5659 0-2 TO denotes To
T5660 3-11 VB denotes evaluate
T5661 12-15 DT denotes the
T5662 16-20 NN denotes role
T5663 21-23 IN denotes of
T5664 24-27 NNP denotes PKA
T5665 28-30 IN denotes on
T5666 31-36 JJ denotes TNF-α
T5667 37-47 NN denotes production
T5668 48-50 IN denotes in
T5669 51-62 NN denotes mononuclear
T5670 63-68 NNS denotes cells
T5671 69-72 CC denotes and
T5672 73-76 PRP$ denotes its
T5673 77-88 NN denotes involvement
T5674 89-91 IN denotes in
T5675 92-95 DT denotes the
T5676 96-107 NN denotes attenuation
T5677 108-110 IN denotes of
T5678 111-122 JJ denotes LPS-induced
T5679 123-128 JJ denotes TNF-α
T5680 129-139 NN denotes production
T5681 140-148 VBD denotes observed
T5682 149-158 VBG denotes following
T5683 159-162 NNP denotes PTX
T5684 163-172 NN denotes treatment
T5685 172-173 , denotes ,
T5686 174-177 NNP denotes H89
T5687 177-178 , denotes ,
T5688 179-180 DT denotes a
T5689 181-189 JJ denotes specific
T5690 190-193 NNP denotes PKA
T5691 194-203 NN denotes inhibitor
T5692 203-204 , denotes ,
T5693 205-208 VBD denotes was
T5694 209-217 VBN denotes utilized
T5695 217-218 . denotes .
R4691 T5659 T5660 aux To,evaluate
R4693 T5661 T5662 det the,role
R4694 T5662 T5660 dobj role,evaluate
R4695 T5663 T5662 prep of,role
R4696 T5664 T5663 pobj PKA,of
R4697 T5665 T5662 prep on,role
R4698 T5666 T5667 amod TNF-α,production
R4699 T5667 T5665 pobj production,on
R4700 T5668 T5667 prep in,production
R4701 T5669 T5670 amod mononuclear,cells
R4702 T5670 T5668 pobj cells,in
R4703 T5671 T5670 cc and,cells
R4704 T5672 T5673 poss its,involvement
R4705 T5673 T5662 conj involvement,role
R4706 T5674 T5673 prep in,involvement
R4707 T5675 T5676 det the,attenuation
R4708 T5676 T5674 pobj attenuation,in
R4709 T5677 T5676 prep of,attenuation
R4710 T5678 T5680 amod LPS-induced,production
R4711 T5679 T5680 compound TNF-α,production
R4712 T5680 T5677 pobj production,of
R4713 T5681 T5694 ccomp observed,utilized
R4714 T5682 T5681 prep following,observed
R4715 T5683 T5684 compound PTX,treatment
R4716 T5684 T5682 pobj treatment,following
R4717 T5685 T5684 punct ",",treatment
R4718 T5686 T5694 nsubjpass H89,utilized
R4719 T5687 T5686 punct ",",H89
R4720 T5688 T5691 det a,inhibitor
R4721 T5689 T5691 amod specific,inhibitor
R4722 T5690 T5691 compound PKA,inhibitor
R4723 T5691 T5686 appos inhibitor,H89
R4724 T5692 T5694 punct ",",utilized
R4725 T5693 T5694 auxpass was,utilized
R4726 T5694 T5694 ROOT utilized,utilized
R4727 T5695 T5694 punct .,utilized

GO-BP

Id Subject Object Predicate Lexical cue
T5961 24-27 http://purl.obolibrary.org/obo/GO_0004691 denotes PKA
T5962 190-193 http://purl.obolibrary.org/obo/GO_0004691 denotes PKA
T5966 31-47 http://purl.obolibrary.org/obo/GO_0032680 denotes TNF-α production
T5967 123-139 http://purl.obolibrary.org/obo/GO_0032680 denotes TNF-α production
T5969 31-47 http://purl.obolibrary.org/obo/GO_0032640 denotes TNF-α production
T5970 123-139 http://purl.obolibrary.org/obo/GO_0032640 denotes TNF-α production

GO-MF

Id Subject Object Predicate Lexical cue
T5972 24-27 http://purl.obolibrary.org/obo/GO_0004691 denotes PKA
T5973 190-193 http://purl.obolibrary.org/obo/GO_0004691 denotes PKA

GO-CC

Id Subject Object Predicate Lexical cue
T5978 190-193 http://purl.obolibrary.org/obo/GO_0005952 denotes PKA
T5982 63-68 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5977 24-27 http://purl.obolibrary.org/obo/GO_0005952 denotes PKA

sentences

Id Subject Object Predicate Lexical cue
T5644 0-218 Sentence denotes To evaluate the role of PKA on TNF-α production in mononuclear cells and its involvement in the attenuation of LPS-induced TNF-α production observed following PTX treatment, H89, a specific PKA inhibitor, was utilized.
T94 0-218 Sentence denotes To evaluate the role of PKA on TNF-α production in mononuclear cells and its involvement in the attenuation of LPS-induced TNF-α production observed following PTX treatment, H89, a specific PKA inhibitor, was utilized.

events-check-again

Id Subject Object Predicate Lexical cue
T6044 16-20 Regulation denotes role
T6045 31-36 Protein denotes TNF-α
T6046 37-47 Gene_expression denotes production
T6047 77-88 Regulation denotes involvement
T6048 96-107 Negative_regulation denotes attenuation
T6049 115-122 Positive_regulation denotes induced
T6050 123-128 Protein denotes TNF-α
T6051 129-139 Gene_expression denotes production
R5020 T6045 T6046 themeOf TNF-α,production
R5021 T6046 T6044 themeOf production,role
R5022 T6048 T6047 themeOf attenuation,involvement
R5023 T6049 T6048 themeOf induced,attenuation
R5024 T6050 T6051 themeOf TNF-α,production
R5025 T6051 T6049 themeOf production,induced

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T5989 24-27 Protein denotes PKA
T5990 31-36 Protein denotes TNF-α
T5991 123-128 Protein denotes TNF-α
T5992 190-193 Protein denotes PKA
T5993 37-47 Gene_expression denotes production
T5994 129-139 Gene_expression denotes production
T5995 194-203 Negative_regulation denotes inhibitor
T5996 16-20 Regulation denotes role
T5997 96-107 Negative_regulation denotes attenuation
T5998 77-88 Regulation denotes involvement
R4984 T5989 T5996 causeOf PKA,role
R4985 T5990 T5993 themeOf TNF-α,production
R4986 T5991 T5994 themeOf TNF-α,production
R4987 T5992 T5995 themeOf PKA,inhibitor
R4988 T5993 T5996 themeOf production,role
R4989 T5994 T5997 themeOf production,attenuation
R4990 T5997 T5998 themeOf attenuation,involvement

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5944 31-34 P01375 denotes TNF
T5945 31-36 P01375 denotes TNF-α
T5946 123-126 P01375 denotes TNF
T5947 123-128 P01375 denotes TNF-α

test2

Id Subject Object Predicate Lexical cue
T5614 16-20 Regulation denotes role
T5615 31-36 Protein denotes TNF-α
T5616 37-47 Gene_expression denotes production
T5617 115-122 Positive_regulation denotes induced
T5618 123-128 Protein denotes TNF-α
T5619 129-139 Gene_expression denotes production
T5620 149-158 Positive_regulation denotes following
R4662 T5615 T5616 themeOf TNF-α,production
R4663 T5617 T5620 themeOf induced,following
R4664 T5618 T5619 themeOf TNF-α,production
R4665 T5619 T5620 themeOf production,following
R4666 T5619 T5617 themeOf production,induced