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PMC:2664230 / 1041-1300 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T71 19-24 Protein denotes TNF-α
T72 239-245 Negative_regulation denotes reduce
T73 239-245 Negative_regulation denotes reduce

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T607 6-11 NN denotes shift
T608 12-17 NN denotes assay
T609 19-24 NN denotes TNF-α
T610 25-31 NN denotes levels
T611 32-36 VB denotes were
T612 37-47 VB denotes determined
T613 48-50 IN denotes in
T614 51-54 DT denotes the
T615 55-66 NN denotes supernatant
T616 67-69 IN denotes of
T617 70-80 VB denotes stimulated
T618 81-86 NN denotes cells
T619 87-89 IN denotes in
T620 90-93 DT denotes the
T621 94-102 NN denotes presence
T622 103-106 CC denotes and
T623 107-114 NN denotes absence
T624 115-122 NN denotes Protein
T625 123-129 NN denotes kinase
T626 130-131 NN denotes A
T627 132-142 NN denotes inhibition
T628 143-145 IN denotes by
T629 146-148 DT denotes an
T630 149-162 JJ denotes enzyme-linked
T631 163-176 JJ denotes immunosorbent
T632 177-182 NN denotes assay
T633 183-184 -LRB- denotes (
T634 184-189 NN denotes ELISA
T635 189-190 -RRB- denotes )
T636 193-200 NN denotes RESULTS
T637 201-204 NN denotes PTX
T638 205-208 VB denotes was
T639 209-221 VB denotes demonstrated
T640 222-224 TO denotes to
T641 225-238 RB denotes significantly
T642 239-245 VB denotes reduce
T643 246-257 JJ denotes cytoplasmic
R499 T608 T607 arg1Of assay,shift
R500 T610 T609 arg1Of levels,TNF-α
R501 T610 T611 arg1Of levels,were
R502 T610 T612 arg2Of levels,determined
R503 T612 T611 arg2Of determined,were
R504 T612 T613 arg1Of determined,in
R505 T612 T619 arg1Of determined,in
R506 T615 T613 arg2Of supernatant,in
R507 T615 T614 arg1Of supernatant,the
R508 T615 T616 arg1Of supernatant,of
R509 T618 T616 arg2Of cells,of
R510 T618 T617 arg2Of cells,stimulated
R511 T621 T622 arg1Of presence,and
R512 T623 T622 arg2Of absence,and
R513 T627 T619 arg2Of inhibition,in
R514 T627 T620 arg1Of inhibition,the
R515 T627 T621 arg1Of inhibition,presence
R516 T627 T623 arg1Of inhibition,absence
R517 T627 T624 arg1Of inhibition,Protein
R518 T627 T625 arg1Of inhibition,kinase
R519 T627 T626 arg1Of inhibition,A
R520 T627 T628 arg1Of inhibition,by
R521 T632 T628 arg2Of assay,by
R522 T632 T629 arg1Of assay,an
R523 T632 T630 arg1Of assay,enzyme-linked
R524 T632 T631 arg1Of assay,immunosorbent
R525 T632 T633 arg1Of assay,(
R526 T634 T633 arg2Of ELISA,(
R527 T635 T633 arg3Of ),(
R528 T637 T638 arg1Of PTX,was
R529 T637 T639 arg2Of PTX,demonstrated
R530 T637 T642 arg1Of PTX,reduce
R531 T639 T638 arg2Of demonstrated,was
R532 T642 T639 arg3Of reduce,demonstrated
R533 T642 T640 arg1Of reduce,to
R534 T642 T641 arg1Of reduce,significantly

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T294 6-11 NN denotes shift
T295 12-17 NN denotes assay
T296 17-18 . denotes .
T297 19-24 JJ denotes TNF-α
T298 25-31 NNS denotes levels
T299 32-36 VBD denotes were
T300 37-47 VBN denotes determined
T301 48-50 IN denotes in
T302 51-54 DT denotes the
T303 55-66 NN denotes supernatant
T304 67-69 IN denotes of
T305 70-80 VBN denotes stimulated
T306 81-86 NNS denotes cells
T307 87-89 IN denotes in
T308 90-93 DT denotes the
T309 94-102 NN denotes presence
T310 103-106 CC denotes and
T311 107-114 NN denotes absence
T312 115-122 NNP denotes Protein
T313 123-129 NN denotes kinase
T314 130-131 DT denotes A
T315 132-142 NN denotes inhibition
T316 143-145 IN denotes by
T317 146-148 DT denotes an
T318 149-162 JJ denotes enzyme-linked
T319 163-176 JJ denotes immunosorbent
T320 177-182 NN denotes assay
T321 183-184 -LRB- denotes (
T322 184-189 NNP denotes ELISA
T323 189-190 -RRB- denotes )
T324 190-191 . denotes .
T325 193-200 NNS denotes RESULTS
T326 201-204 VBP denotes PTX
T327 205-208 VBD denotes was
T328 209-221 VBN denotes demonstrated
T329 222-224 TO denotes to
T330 225-238 RB denotes significantly
T331 239-245 VB denotes reduce
T332 246-257 JJ denotes cytoplasmic
R192 T294 T295 compound shift,assay
R195 T297 T298 amod TNF-α,levels
R196 T298 T300 nsubjpass levels,determined
R197 T299 T300 auxpass were,determined
R198 T300 T300 ROOT determined,determined
R199 T301 T300 prep in,determined
R200 T302 T303 det the,supernatant
R201 T303 T301 pobj supernatant,in
R202 T304 T303 prep of,supernatant
R203 T305 T306 amod stimulated,cells
R204 T306 T304 pobj cells,of
R205 T307 T303 prep in,supernatant
R206 T308 T309 det the,presence
R207 T309 T307 pobj presence,in
R208 T310 T309 cc and,presence
R209 T311 T309 conj absence,presence
R210 T312 T313 compound Protein,kinase
R211 T313 T313 ROOT kinase,kinase
R212 T314 T315 det A,inhibition
R213 T315 T315 ROOT inhibition,inhibition
R214 T316 T315 prep by,inhibition
R215 T317 T320 det an,assay
R216 T318 T320 nmod enzyme-linked,assay
R217 T319 T320 compound immunosorbent,assay
R218 T320 T316 pobj assay,by
R219 T321 T320 punct (,assay
R220 T322 T320 appos ELISA,assay
R221 T323 T320 punct ),assay
R222 T324 T315 punct .,inhibition
R223 T325 T326 compound RESULTS,PTX
R224 T326 T328 nsubjpass PTX,demonstrated
R225 T327 T328 auxpass was,demonstrated
R226 T328 T328 ROOT demonstrated,demonstrated
R227 T329 T331 aux to,reduce
R228 T330 T331 advmod significantly,reduce
R229 T331 T328 xcomp reduce,demonstrated

GO-CC

Id Subject Object Predicate Lexical cue
T883 81-86 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T121 19-191 Sentence denotes TNF-α levels were determined in the supernatant of stimulated cells in the presence and absence Protein kinase A inhibition by an enzyme-linked immunosorbent assay (ELISA).
T122 193-200 Sentence denotes RESULTS
T13 19-191 Sentence denotes TNF-α levels were determined in the supernatant of stimulated cells in the presence and absence Protein kinase A inhibition by an enzyme-linked immunosorbent assay (ELISA).
T14 193-200 Sentence denotes RESULTS

events-check-again

Id Subject Object Predicate Lexical cue
T901 19-24 Protein denotes TNF-α
T902 239-245 Negative_regulation denotes reduce
T903 239-245 Negative_regulation denotes reduce

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T943 19-24 Protein denotes TNF-α
T944 115-131 Protein denotes Protein kinase A
T945 132-142 Negative_regulation denotes inhibition
T946 201-204 Protein denotes PTX
T947 246-259 Protein denotes cytoplasmic I
T956 239-245 Negative_regulation denotes reduce
R681 T944 T945 themeOf Protein kinase A,inhibition
R682 T946 T956 causeOf PTX,reduce

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T786 19-22 P01375 denotes TNF
T787 19-24 P01375 denotes TNF-α

test2

Id Subject Object Predicate Lexical cue Negation
T44 19-24 Protein denotes TNF-α
T45 239-245 Negative_regulation denotes reduce true