PMC:2626671 / 1778-2001 JSONTXT

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    pmc-enju-pas

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T988","span":{"begin":3,"end":8},"obj":"NNP"},{"id":"T989","span":{"begin":9,"end":12},"obj":"VBP"},{"id":"T990","span":{"begin":13,"end":19},"obj":"VBN"},{"id":"T991","span":{"begin":20,"end":23},"obj":"IN"},{"id":"T992","span":{"begin":24,"end":33},"obj":"JJ"},{"id":"T993","span":{"begin":34,"end":41},"obj":"NNS"},{"id":"T994","span":{"begin":42,"end":44},"obj":"IN"},{"id":"T995","span":{"begin":45,"end":53},"obj":"NN"},{"id":"T996","span":{"begin":54,"end":57},"obj":"CC"},{"id":"T997","span":{"begin":58,"end":64},"obj":"NN"},{"id":"T998","span":{"begin":65,"end":68},"obj":"NNP"},{"id":"T999","span":{"begin":69,"end":84},"obj":"NN"},{"id":"T1000","span":{"begin":85,"end":86},"obj":"-LRB-"},{"id":"T1001","span":{"begin":86,"end":87},"obj":"CD"},{"id":"T1002","span":{"begin":87,"end":88},"obj":"-RRB-"},{"id":"T1003","span":{"begin":88,"end":89},"obj":"."},{"id":"T1004","span":{"begin":90,"end":92},"obj":"IN"},{"id":"T1005","span":{"begin":93,"end":103},"obj":"JJ"},{"id":"T1006","span":{"begin":104,"end":108},"obj":"NNS"},{"id":"T1007","span":{"begin":108,"end":109},"obj":","},{"id":"T1008","span":{"begin":110,"end":118},"obj":"NN"},{"id":"T1009","span":{"begin":119,"end":127},"obj":"NN"},{"id":"T1010","span":{"begin":128,"end":130},"obj":"IN"},{"id":"T1011","span":{"begin":131,"end":140},"obj":"NNP"},{"id":"T1012","span":{"begin":141,"end":142},"obj":"-LRB-"},{"id":"T1013","span":{"begin":142,"end":150},"obj":"VBG"},{"id":"T1014","span":{"begin":151,"end":156},"obj":"NNP"},{"id":"T1015","span":{"begin":156,"end":157},"obj":"-RRB-"},{"id":"T1016","span":{"begin":158,"end":180},"obj":"NNS"},{"id":"T1017","span":{"begin":181,"end":183},"obj":"VBZ"},{"id":"T1018","span":{"begin":184,"end":194},"obj":"VBN"},{"id":"T1019","span":{"begin":195,"end":199},"obj":"IN"},{"id":"T1020","span":{"begin":200,"end":201},"obj":"DT"},{"id":"T1021","span":{"begin":202,"end":211},"obj":"JJ"},{"id":"T1022","span":{"begin":212,"end":216},"obj":"NN"},{"id":"T1023","span":{"begin":217,"end":219},"obj":"IN"},{"id":"T1024","span":{"begin":220,"end":223},"obj":"CD"}],"relations":[{"id":"R755","pred":"auxpass","subj":"T989","obj":"T990"},{"id":"R756","pred":"ROOT","subj":"T990","obj":"T990"},{"id":"R757","pred":"prep","subj":"T991","obj":"T990"},{"id":"R758","pred":"amod","subj":"T992","obj":"T993"},{"id":"R759","pred":"pobj","subj":"T993","obj":"T991"},{"id":"R760","pred":"prep","subj":"T994","obj":"T993"},{"id":"R761","pred":"pobj","subj":"T995","obj":"T994"},{"id":"R762","pred":"cc","subj":"T996","obj":"T995"},{"id":"R763","pred":"compound","subj":"T997","obj":"T999"},{"id":"R764","pred":"compound","subj":"T998","obj":"T999"},{"id":"R765","pred":"conj","subj":"T999","obj":"T995"},{"id":"R766","pred":"punct","subj":"T1000","obj":"T1001"},{"id":"R767","pred":"npadvmod","subj":"T1001","obj":"T999"},{"id":"R768","pred":"punct","subj":"T1002","obj":"T990"},{"id":"R769","pred":"punct","subj":"T1003","obj":"T990"},{"id":"R770","pred":"prep","subj":"T1004","obj":"T1018"},{"id":"R771","pred":"amod","subj":"T1005","obj":"T1006"},{"id":"R772","pred":"pobj","subj":"T1006","obj":"T1004"},{"id":"R773","pred":"punct","subj":"T1007","obj":"T1018"},{"id":"R774","pred":"compound","subj":"T1008","obj":"T1009"},{"id":"R775","pred":"nsubjpass","subj":"T1009","obj":"T1018"},{"id":"R776","pred":"prep","subj":"T1010","obj":"T1009"},{"id":"R777","pred":"pobj","subj":"T1011","obj":"T1010"},{"id":"R778","pred":"punct","subj":"T1012","obj":"T1013"},{"id":"R779","pred":"nmod","subj":"T1013","obj":"T1016"},{"id":"R780","pred":"dobj","subj":"T1014","obj":"T1013"},{"id":"R781","pred":"punct","subj":"T1015","obj":"T1016"},{"id":"R782","pred":"nmod","subj":"T1016","obj":"T1009"},{"id":"R783","pred":"auxpass","subj":"T1017","obj":"T1018"},{"id":"R784","pred":"ROOT","subj":"T1018","obj":"T1018"},{"id":"R785","pred":"prep","subj":"T1019","obj":"T1018"},{"id":"R786","pred":"det","subj":"T1020","obj":"T1022"},{"id":"R787","pred":"amod","subj":"T1021","obj":"T1022"},{"id":"R788","pred":"pobj","subj":"T1022","obj":"T1019"},{"id":"R789","pred":"prep","subj":"T1023","obj":"T1022"}],"text":"nd T-bet are needed for important aspects of effector and memory CTL differentiation (7). In uninfected mice, compound deletion of the Tbx21 (encoding T-bet) and eomesodermin genes is associated with a selective loss of CD8"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T876","span":{"begin":58,"end":64},"obj":"http://purl.obolibrary.org/obo/GO_0007613"}],"text":"nd T-bet are needed for important aspects of effector and memory CTL differentiation (7). In uninfected mice, compound deletion of the Tbx21 (encoding T-bet) and eomesodermin genes is associated with a selective loss of CD8"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T2566","span":{"begin":3,"end":8},"obj":"Protein"},{"id":"T2567","span":{"begin":119,"end":127},"obj":"Negative_regulation"},{"id":"T2568","span":{"begin":119,"end":127},"obj":"Negative_regulation"},{"id":"T2569","span":{"begin":135,"end":140},"obj":"Protein"},{"id":"T2570","span":{"begin":151,"end":156},"obj":"Protein"},{"id":"T2571","span":{"begin":162,"end":174},"obj":"Protein"},{"id":"T2572","span":{"begin":220,"end":223},"obj":"Protein"}],"relations":[{"id":"R2007","pred":"themeOf","subj":"T2569","obj":"T2567"},{"id":"R2008","pred":"equivalentTo","subj":"T2570","obj":"T2569"},{"id":"R2009","pred":"themeOf","subj":"T2571","obj":"T2568"}],"text":"nd T-bet are needed for important aspects of effector and memory CTL differentiation (7). In uninfected mice, compound deletion of the Tbx21 (encoding T-bet) and eomesodermin genes is associated with a selective loss of CD8"}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T1425","span":{"begin":119,"end":127},"obj":"Negative_regulation"},{"id":"T1436","span":{"begin":119,"end":127},"obj":"Negative_regulation"},{"id":"T1446","span":{"begin":151,"end":156},"obj":"Protein"},{"id":"T1447","span":{"begin":162,"end":174},"obj":"Protein"},{"id":"T1448","span":{"begin":220,"end":223},"obj":"Protein"},{"id":"T1499","span":{"begin":3,"end":8},"obj":"Protein"},{"id":"T1501","span":{"begin":135,"end":140},"obj":"Protein"}],"relations":[{"id":"R1229","pred":"themeOf","subj":"T1501","obj":"T1425"},{"id":"R1183","pred":"themeOf","subj":"T1447","obj":"T1436"},{"id":"R1182","pred":"equivalentTo","subj":"T1446","obj":"T1501"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"nd T-bet are needed for important aspects of effector and memory CTL differentiation (7). In uninfected mice, compound deletion of the Tbx21 (encoding T-bet) and eomesodermin genes is associated with a selective loss of CD8"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T2007","span":{"begin":3,"end":8},"obj":"Q9UL17"},{"id":"T2008","span":{"begin":151,"end":156},"obj":"Q9UL17"},{"id":"T2009","span":{"begin":220,"end":223},"obj":"P10966"},{"id":"T2010","span":{"begin":220,"end":223},"obj":"P01732"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"nd T-bet are needed for important aspects of effector and memory CTL differentiation (7). In uninfected mice, compound deletion of the Tbx21 (encoding T-bet) and eomesodermin genes is associated with a selective loss of CD8"}

    test2

    {"project":"test2","denotations":[{"id":"T751","span":{"begin":3,"end":8},"obj":"Protein"},{"id":"T752","span":{"begin":119,"end":127},"obj":"Negative_regulation"},{"id":"T753","span":{"begin":131,"end":140},"obj":"Protein"},{"id":"T754","span":{"begin":151,"end":156},"obj":"Protein"},{"id":"T755","span":{"begin":158,"end":180},"obj":"Protein"},{"id":"T756","span":{"begin":184,"end":194},"obj":"Binding"},{"id":"T757","span":{"begin":220,"end":223},"obj":"Protein"}],"relations":[{"id":"R596","pred":"themeOf","subj":"T753","obj":"T752"},{"id":"R597","pred":"equivalentTo","subj":"T754","obj":"T753"},{"id":"R598","pred":"themeOf","subj":"T755","obj":"T756"},{"id":"R599","pred":"themeOf","subj":"T755","obj":"T752"}],"attributes":[{"id":"M7","pred":"Negation","subj":"T753","obj":"true"},{"id":"M6","pred":"Negation","subj":"T752","obj":"true"},{"id":"M5","pred":"Negation","subj":"T751","obj":"true"}],"text":"nd T-bet are needed for important aspects of effector and memory CTL differentiation (7). In uninfected mice, compound deletion of the Tbx21 (encoding T-bet) and eomesodermin genes is associated with a selective loss of CD8"}