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PMC:2222968 / 813-1129 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T229 0-4 RB denotes also
T230 5-14 VB denotes confirmed
T231 15-17 IN denotes in
T232 18-21 NN denotes Th2
T233 22-27 NN denotes cells
T234 28-31 CC denotes and
T235 32-34 IN denotes in
T236 35-36 NN denotes T
T237 37-42 NN denotes cells
T238 43-45 IN denotes of
T239 46-56 JJ denotes transgenic
T240 57-61 NN denotes mice
T241 62-76 VB denotes overexpressing
T242 77-83 NN denotes GATA-3
T243 84-86 IN denotes in
T244 87-88 NN denotes T
T245 89-94 NN denotes cells
T246 94-95 -COMMA- denotes ,
T247 96-101 WDT denotes which
T248 102-105 VB denotes are
T249 106-111 VB denotes shown
T250 112-114 TO denotes to
T251 115-117 VB denotes be
T252 118-127 JJ denotes deficient
T253 128-130 IN denotes in
T254 131-143 VB denotes transforming
T255 144-150 NN denotes growth
T256 151-157 NN denotes factor
T257 158-159 -LRB- denotes (
T258 159-162 NN denotes TGF
T259 162-163 -RRB- denotes )
T260 163-174 JJ denotes -β–mediated
T261 175-180 NN denotes FOXP3
T262 181-190 NN denotes induction
T263 192-196 DT denotes This
T264 197-207 NN denotes inhibition
T265 208-210 VB denotes is
T266 211-219 VB denotes mediated
T267 220-222 IN denotes by
T268 223-229 JJ denotes direct
T269 230-237 NN denotes binding
T270 238-240 IN denotes of
T271 241-246 NN denotes GATA3
T272 247-249 TO denotes to
T273 250-253 DT denotes the
T274 254-259 NN denotes FOXP3
T275 260-268 NN denotes promoter
T276 268-269 -COMMA- denotes ,
T277 270-275 WDT denotes which
T278 276-285 VB denotes represses
T279 286-289 PRP-DOLLAR- denotes its
T280 290-305 NN denotes transactivation
T281 306-313 NN denotes process
R172 T230 T229 arg1Of confirmed,also
R173 T230 T231 arg1Of confirmed,in
R174 T230 T235 arg1Of confirmed,in
R175 T231 T234 arg1Of in,and
R176 T233 T231 arg2Of cells,in
R177 T233 T232 arg1Of cells,Th2
R178 T235 T234 arg2Of in,and
R179 T237 T235 arg2Of cells,in
R180 T237 T236 arg1Of cells,T
R181 T237 T238 arg1Of cells,of
R182 T240 T238 arg2Of mice,of
R183 T240 T239 arg1Of mice,transgenic
R184 T240 T241 arg1Of mice,overexpressing
R185 T240 T246 arg1Of mice,","
R186 T240 T247 arg1Of mice,which
R187 T240 T248 arg1Of mice,are
R188 T240 T249 arg2Of mice,shown
R189 T240 T251 arg1Of mice,be
R190 T240 T252 arg1Of mice,deficient
R191 T241 T243 arg1Of overexpressing,in
R192 T242 T241 arg2Of GATA-3,overexpressing
R193 T245 T243 arg2Of cells,in
R194 T245 T244 arg1Of cells,T
R195 T249 T248 arg2Of shown,are
R196 T251 T249 arg3Of be,shown
R197 T251 T250 arg1Of be,to
R198 T252 T251 arg2Of deficient,be
R199 T252 T253 arg1Of deficient,in
R200 T254 T253 arg2Of transforming,in
R201 T258 T257 arg2Of TGF,(
R202 T259 T257 arg3Of ),(
R203 T262 T254 arg2Of induction,transforming
R204 T262 T255 arg1Of induction,growth
R205 T262 T256 arg1Of induction,factor
R206 T262 T257 arg1Of induction,(
R207 T262 T260 arg1Of induction,-β–mediated
R208 T262 T261 arg1Of induction,FOXP3
R209 T264 T263 arg1Of inhibition,This
R210 T264 T265 arg1Of inhibition,is
R211 T264 T266 arg2Of inhibition,mediated
R212 T266 T265 arg2Of mediated,is
R213 T269 T266 arg1Of binding,mediated
R214 T269 T267 arg2Of binding,by
R215 T269 T268 arg1Of binding,direct
R216 T269 T270 arg1Of binding,of
R217 T269 T272 arg1Of binding,to
R218 T269 T276 arg1Of binding,","
R219 T269 T277 arg1Of binding,which
R220 T269 T278 arg1Of binding,represses
R221 T271 T270 arg2Of GATA3,of
R222 T275 T272 arg2Of promoter,to
R223 T275 T273 arg1Of promoter,the
R224 T275 T274 arg1Of promoter,FOXP3
R225 T281 T278 arg2Of process,represses
R226 T281 T279 arg1Of process,its
R227 T281 T280 arg1Of process,transactivation

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T337 192-207 Anaphor denotes This inhibition
T338 118-127 Antecedent denotes deficient
R635 T337 T338 boundBy This inhibition,deficient

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T488 0-4 RB denotes also
T489 5-14 VBN denotes confirmed
T490 15-17 IN denotes in
T491 18-21 JJ denotes Th2
T492 22-27 NNS denotes cells
T493 28-31 CC denotes and
T494 32-34 IN denotes in
T495 35-36 NNP denotes T
T496 37-42 NNS denotes cells
T497 43-45 IN denotes of
T498 46-56 JJ denotes transgenic
T499 57-61 NNS denotes mice
T500 62-76 VBG denotes overexpressing
T501 77-83 NN denotes GATA-3
T502 84-86 IN denotes in
T503 87-88 NNP denotes T
T504 89-94 NNS denotes cells
T505 94-95 , denotes ,
T506 96-101 WDT denotes which
T507 102-105 VBP denotes are
T508 106-111 VBN denotes shown
T509 112-114 TO denotes to
T510 115-117 VB denotes be
T511 118-127 JJ denotes deficient
T512 128-130 IN denotes in
T513 131-143 VBG denotes transforming
T514 144-150 NN denotes growth
T515 151-157 NN denotes factor
T516 158-159 -LRB- denotes (
T517 159-162 NNP denotes TGF
T518 162-163 -RRB- denotes )
T519 163-164 : denotes -
T520 164-165 NN denotes β
T521 166-174 VBD denotes mediated
T522 175-180 CD denotes FOXP3
T523 181-190 NN denotes induction
T524 190-191 . denotes .
T525 192-196 DT denotes This
T526 197-207 NN denotes inhibition
T527 208-210 VBZ denotes is
T528 211-219 VBN denotes mediated
T529 220-222 IN denotes by
T530 223-229 JJ denotes direct
T531 230-237 JJ denotes binding
T532 238-240 IN denotes of
T533 241-246 CD denotes GATA3
T534 247-249 TO denotes to
T535 250-253 DT denotes the
T536 254-259 CD denotes FOXP3
T537 260-268 NN denotes promoter
T538 268-269 , denotes ,
T539 270-275 WDT denotes which
T540 276-285 VBZ denotes represses
T541 286-289 PRP$ denotes its
T542 290-305 NN denotes transactivation
T543 306-313 NN denotes process
T544 313-314 . denotes .
R408 T488 T489 advmod also,confirmed
R409 T489 T489 ROOT confirmed,confirmed
R410 T490 T489 prep in,confirmed
R411 T491 T492 amod Th2,cells
R412 T492 T490 pobj cells,in
R413 T493 T490 cc and,in
R414 T494 T490 conj in,in
R415 T495 T496 compound T,cells
R416 T496 T494 pobj cells,in
R417 T497 T496 prep of,cells
R418 T498 T499 amod transgenic,mice
R419 T499 T497 pobj mice,of
R420 T500 T489 advcl overexpressing,confirmed
R421 T501 T500 dobj GATA-3,overexpressing
R422 T502 T500 prep in,overexpressing
R423 T503 T504 compound T,cells
R424 T504 T502 pobj cells,in
R425 T505 T489 punct ",",confirmed
R426 T506 T508 nsubjpass which,shown
R427 T507 T508 auxpass are,shown
R428 T508 T489 advcl shown,confirmed
R429 T509 T510 aux to,be
R430 T510 T508 xcomp be,shown
R431 T511 T510 acomp deficient,be
R432 T512 T511 prep in,deficient
R433 T513 T512 pcomp transforming,in
R434 T514 T515 compound growth,factor
R435 T515 T513 dobj factor,transforming
R436 T516 T517 punct (,TGF
R437 T517 T515 appos TGF,factor
R438 T518 T517 punct ),TGF
R439 T519 T515 punct -,factor
R440 T520 T515 appos β,factor
R441 T521 T489 conj mediated,confirmed
R442 T522 T523 nummod FOXP3,induction
R443 T523 T521 dobj induction,mediated
R444 T524 T489 punct .,confirmed
R445 T525 T526 det This,inhibition
R446 T526 T528 nsubjpass inhibition,mediated
R447 T527 T528 auxpass is,mediated
R448 T528 T528 ROOT mediated,mediated
R449 T529 T528 agent by,mediated
R450 T530 T531 amod direct,binding
R451 T531 T529 pobj binding,by
R452 T532 T531 prep of,binding
R453 T533 T532 pobj GATA3,of
R454 T534 T528 prep to,mediated
R455 T535 T537 det the,promoter
R456 T536 T537 nummod FOXP3,promoter
R457 T537 T534 pobj promoter,to
R458 T538 T537 punct ",",promoter
R459 T539 T540 nsubj which,represses
R460 T540 T537 relcl represses,promoter
R461 T541 T543 poss its,process
R462 T542 T543 compound transactivation,process
R463 T543 T540 dobj process,represses
R464 T544 T528 punct .,mediated

GO-BP

Id Subject Object Predicate Lexical cue
T70 144-150 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T71 290-305 http://purl.obolibrary.org/obo/GO_2000144 denotes transactivation

GO-MF

Id Subject Object Predicate Lexical cue
T634 230-237 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

GO-CC

Id Subject Object Predicate Lexical cue
T636 22-27 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T637 37-42 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T638 89-94 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T64 192-314 Sentence denotes This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process.
T8 192-314 Sentence denotes This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process.

events-check-again

Id Subject Object Predicate Lexical cue
T768 131-165 Protein denotes transforming growth factor (TGF)-β
T769 166-174 Positive_regulation denotes mediated
T770 175-180 Protein denotes FOXP3
T771 181-190 Positive_regulation denotes induction
T772 211-219 Positive_regulation denotes mediated
T773 230-237 Binding denotes binding
T774 241-246 Protein denotes GATA3
T775 254-259 Protein denotes FOXP3
T776 260-268 Entity denotes promoter
T765 62-76 Gene_expression denotes overexpressing
T766 77-83 Protein denotes GATA-3
T767 118-127 Negative_regulation denotes deficient
R599 T768 T769 causeOf transforming growth factor (TGF)-β,mediated
R600 T769 T767 themeOf mediated,deficient
R601 T770 T771 themeOf FOXP3,induction
R602 T771 T769 themeOf induction,mediated
R603 T773 T772 causeOf binding,mediated
R604 T774 T773 themeOf GATA3,binding
R605 T776 T773 themeOf promoter,binding
R606 T776 T775 partOf promoter,FOXP3
R662 T766 T765 themeOf GATA-3,overexpressing
R663 T767 T772 themeOf deficient,mediated

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T657 77-83 Protein denotes GATA-3
T658 175-180 Protein denotes FOXP3
T659 62-76 Gene_expression denotes overexpressing
T660 181-190 Positive_regulation denotes induction
T661 118-127 Negative_regulation denotes deficient
T662 241-246 Protein denotes GATA3
T663 254-268 Protein denotes FOXP3 promoter
T664 230-237 Binding denotes binding
T665 230-237 Binding denotes binding
R555 T662 T665 themeOf GATA3,binding
R556 T663 T665 themeOf FOXP3 promoter,binding
R551 T657 T659 themeOf GATA-3,overexpressing
R552 T658 T660 themeOf FOXP3,induction
R553 T660 T661 themeOf induction,deficient
R554 T662 T664 themeOf GATA3,binding

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T105 77-83 Protein denotes GATA-3
T106 131-165 Protein denotes transforming growth factor (TGF)-β
T78 181-190 Positive_regulation denotes induction
T79 211-219 Positive_regulation denotes mediated
T80 230-237 Binding denotes binding
T88 62-76 Gene_expression denotes overexpressing
T89 118-127 Negative_regulation denotes deficient
T90 166-174 Positive_regulation denotes mediated
T92 175-180 Protein denotes FOXP3
T93 241-246 Protein denotes GATA3
T94 254-259 Protein denotes FOXP3
T100 260-268 Entity denotes promoter
R623 T89 T79 themeOf deficient,mediated
R624 T90 T89 themeOf mediated,deficient
R625 T92 T78 themeOf FOXP3,induction
R626 T93 T80 themeOf GATA3,binding
R631 T100 T80 themeOf promoter,binding
R632 T100 T94 partOf promoter,FOXP3
R42 T105 T88 themeOf GATA-3,overexpressing
R43 T106 T90 causeOf transforming growth factor (TGF)-β,mediated
R618 T78 T90 themeOf induction,mediated
R619 T80 T79 causeOf binding,mediated

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T345 77-83 P23771 denotes GATA-3
T346 175-180 Q9BZS1 denotes FOXP3
T347 241-246 P23771 denotes GATA3
T348 254-259 Q9BZS1 denotes FOXP3

test2

Id Subject Object Predicate Lexical cue
T42 62-76 Gene_expression denotes overexpressing
T43 77-83 Protein denotes GATA-3
T44 118-127 Negative_regulation denotes deficient
T45 131-165 Protein denotes transforming growth factor (TGF)-β
T46 166-174 Positive_regulation denotes mediated
T47 175-180 Protein denotes FOXP3
T48 181-190 Positive_regulation denotes induction
T49 230-237 Binding denotes binding
T50 241-246 Protein denotes GATA3
T51 254-259 Protein denotes FOXP3
T52 260-268 Entity denotes promoter
R30 T43 T42 themeOf GATA-3,overexpressing
R31 T47 T48 themeOf FOXP3,induction
R32 T48 T46 themeOf induction,mediated
R33 T50 T49 themeOf GATA3,binding
R34 T52 T51 partOf promoter,FOXP3
R35 T52 T49 themeOf promoter,binding