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PMC:2222968 / 46285-46494 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T23101 0-3 DT denotes The
T23102 4-9 NN denotes beads
T23103 10-14 VB denotes were
T23104 15-21 VB denotes washed
T23105 22-27 RB denotes twice
T23106 28-32 IN denotes with
T23107 33-39 NN denotes buffer
T23108 40-41 NN denotes C
T23109 41-42 -COLON- denotes :
T23110 42-43 NN denotes D
T23111 44-45 -LRB- denotes (
T23112 45-46 CD denotes 1
T23113 46-47 -COLON- denotes :
T23114 47-48 CD denotes 3
T23115 48-49 -RRB- denotes )
T23116 50-53 CC denotes and
T23117 54-65 VB denotes resuspended
T23118 66-68 IN denotes in
T23119 69-83 JJ denotes DTT-containing
T23120 84-91 NN denotes loading
T23121 92-98 NN denotes buffer
T23122 99-100 -LRB- denotes (
T23123 100-106 NN denotes NuPAGE
T23124 106-107 -COLON- denotes ;
T23125 108-118 NN denotes Invitrogen
T23126 118-119 -RRB- denotes )
T23127 119-120 -COMMA- denotes ,
T23128 121-127 VB denotes heated
T23129 128-130 TO denotes to
T23130 131-133 CD denotes 70
T23131 134-136 NN denotes °C
T23132 137-140 IN denotes for
T23133 141-143 CD denotes 10
T23134 144-147 NN denotes min
T23135 147-148 -COMMA- denotes ,
T23136 149-152 CC denotes and
T23137 153-156 DT denotes the
T23138 157-164 NN denotes eluants
T23139 165-167 IN denotes on
T23140 168-169 DT denotes a
T23141 170-176 NN denotes NuPAGE
T23142 177-181 CD denotes 4–12
T23143 181-182 NN denotes %
T23144 183-191 JJ denotes bis-tris
T23145 192-195 NN denotes gel
T23146 196-197 -LRB- denotes (
T23147 197-207 NN denotes Invitrogen
T23148 207-208 -RRB- denotes )
R17287 T23102 T23101 arg1Of beads,The
R17288 T23102 T23103 arg1Of beads,were
R17289 T23102 T23104 arg2Of beads,washed
R17290 T23104 T23103 arg2Of washed,were
R17291 T23104 T23105 arg1Of washed,twice
R17292 T23104 T23106 arg1Of washed,with
R17293 T23104 T23109 arg1Of washed,:
R17294 T23108 T23106 arg2Of C,with
R17295 T23108 T23107 arg1Of C,buffer
R17298 T23110 T23111 arg1Of D,(
R17299 T23112 T23113 arg1Of 1,:
R17300 T23113 T23111 arg2Of :,(
R17301 T23114 T23113 arg2Of 3,:
R17302 T23115 T23111 arg3Of ),(
R17304 T23117 T23116 arg2Of resuspended,and
R17305 T23117 T23118 arg1Of resuspended,in
R17306 T23121 T23119 arg1Of buffer,DTT-containing
R17307 T23121 T23120 arg1Of buffer,loading
R17308 T23121 T23122 arg1Of buffer,(
R17309 T23121 T23127 arg1Of buffer,","
R17310 T23121 T23128 arg2Of buffer,heated
R17311 T23121 T23136 arg1Of buffer,and
R17312 T23123 T23122 arg2Of NuPAGE,(
R17313 T23123 T23124 arg1Of NuPAGE,;
R17314 T23125 T23124 arg2Of Invitrogen,;
R17315 T23126 T23122 arg3Of ),(
R17316 T23128 T23129 arg1Of heated,to
R17317 T23128 T23132 arg1Of heated,for
R17318 T23131 T23129 arg2Of °C,to
R17319 T23131 T23130 arg1Of °C,70
R17320 T23134 T23132 arg2Of min,for
R17321 T23134 T23133 arg1Of min,10
R17322 T23136 T23118 arg2Of and,in
R17323 T23136 T23135 arg1Of and,","
R17324 T23138 T23136 arg2Of eluants,and
R17325 T23138 T23137 arg1Of eluants,the
R17326 T23138 T23139 arg1Of eluants,on
R17327 T23142 T23143 arg1Of 4–12,%
R17328 T23145 T23139 arg2Of gel,on
R17329 T23145 T23140 arg1Of gel,a
R17330 T23145 T23141 arg1Of gel,NuPAGE
R17331 T23145 T23142 arg1Of gel,4–12
R17332 T23145 T23144 arg1Of gel,bis-tris
R17333 T23145 T23146 arg1Of gel,(
R17334 T23147 T23146 arg2Of Invitrogen,(
R17335 T23148 T23146 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T23327 0-3 DT denotes The
T23328 4-9 NNS denotes beads
T23329 10-14 VBD denotes were
T23330 15-21 VBN denotes washed
T23331 22-27 RB denotes twice
T23332 28-32 IN denotes with
T23333 33-39 NN denotes buffer
T23334 40-41 NNP denotes C
T23335 41-43 NNP denotes :D
T23336 44-45 -LRB- denotes (
T23337 45-48 CD denotes 1:3
T23338 48-49 -RRB- denotes )
T23339 50-53 CC denotes and
T23340 54-65 VBD denotes resuspended
T23341 66-68 IN denotes in
T23342 69-83 JJ denotes DTT-containing
T23343 84-91 VBG denotes loading
T23344 92-98 NN denotes buffer
T23345 99-100 -LRB- denotes (
T23346 100-106 NNP denotes NuPAGE
T23347 106-107 : denotes ;
T23348 108-118 NNP denotes Invitrogen
T23349 118-119 -RRB- denotes )
T23350 119-120 , denotes ,
T23351 121-127 VBN denotes heated
T23352 128-130 TO denotes to
T23353 131-133 CD denotes 70
T23354 134-135 CD denotes °
T23355 135-136 NNP denotes C
T23356 137-140 IN denotes for
T23357 141-143 CD denotes 10
T23358 144-147 NN denotes min
T23359 147-148 , denotes ,
T23360 149-152 CC denotes and
T23361 153-156 DT denotes the
T23362 157-164 NNS denotes eluants
T23363 165-167 IN denotes on
T23364 168-169 DT denotes a
T23365 170-176 NNP denotes NuPAGE
T23366 177-178 CD denotes 4
T23367 179-181 CD denotes 12
T23368 181-182 NN denotes %
T23369 183-191 JJ denotes bis-tris
T23370 192-195 NN denotes gel
T23371 196-197 -LRB- denotes (
T23372 197-207 NNP denotes Invitrogen
T23373 207-208 -RRB- denotes )
T23374 208-209 . denotes .
R17506 T23327 T23328 det The,beads
R17507 T23328 T23330 nsubjpass beads,washed
R17508 T23329 T23330 auxpass were,washed
R17509 T23330 T23351 ccomp washed,heated
R17510 T23331 T23330 advmod twice,washed
R17511 T23332 T23330 prep with,washed
R17512 T23333 T23335 compound buffer,:D
R17513 T23334 T23335 compound C,:D
R17514 T23335 T23332 pobj :D,with
R17515 T23336 T23335 punct (,:D
R17516 T23337 T23335 appos 1:3,:D
R17517 T23338 T23335 punct ),:D
R17518 T23339 T23330 cc and,washed
R17519 T23340 T23330 conj resuspended,washed
R17520 T23341 T23340 prep in,resuspended
R17521 T23342 T23344 amod DTT-containing,buffer
R17522 T23343 T23344 compound loading,buffer
R17523 T23344 T23341 pobj buffer,in
R17524 T23345 T23346 punct (,NuPAGE
R17525 T23346 T23344 appos NuPAGE,buffer
R17526 T23347 T23351 punct ;,heated
R17527 T23348 T23351 nsubj Invitrogen,heated
R17528 T23349 T23348 punct ),Invitrogen
R17529 T23350 T23351 punct ",",heated
R17530 T23351 T23351 ROOT heated,heated
R17531 T23352 T23351 prep to,heated
R17532 T23353 T23354 compound 70,°
R17533 T23354 T23355 compound °,C
R17534 T23355 T23352 pobj C,to
R17535 T23356 T23351 prep for,heated
R17536 T23357 T23358 nummod 10,min
R17537 T23358 T23356 pobj min,for
R17538 T23359 T23351 punct ",",heated
R17539 T23360 T23351 cc and,heated
R17540 T23361 T23362 det the,eluants
R17541 T23362 T23351 conj eluants,heated
R17542 T23363 T23362 prep on,eluants
R17543 T23364 T23370 det a,gel
R17544 T23365 T23370 nmod NuPAGE,gel
R17545 T23366 T23365 nummod 4,NuPAGE
R17546 T23367 T23368 nummod 12,%
R17547 T23368 T23370 nmod %,gel
R17548 T23369 T23370 amod bis-tris,gel
R17549 T23370 T23363 pobj gel,on
R17550 T23371 T23372 punct (,Invitrogen
R17551 T23372 T23370 appos Invitrogen,gel
R17552 T23373 T23362 punct ),eluants
R17553 T23374 T23351 punct .,heated

sentences

Id Subject Object Predicate Lexical cue
T350 0-209 Sentence denotes The beads were washed twice with buffer C:D (1:3) and resuspended in DTT-containing loading buffer (NuPAGE; Invitrogen), heated to 70 °C for 10 min, and the eluants on a NuPAGE 4–12% bis-tris gel (Invitrogen).