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PMC:2222968 / 29189-29386 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
18162042-15577848-84705036 102-104 15577848 denotes 39
18162042-16517699-84705037 115-117 16517699 denotes 40
18162042-15294932-84705038 135-137 15294932 denotes 41
18162042-12524538-84705039 190-192 12524538 denotes 42
18162042-16237062-84705039 190-192 16237062 denotes 42
18162042-16476055-84705039 190-192 16476055 denotes 42
18162042-11544451-84705039 190-192 11544451 denotes 42
T18872 102-104 15577848 denotes 39
T75575 115-117 16517699 denotes 40
T60830 135-137 15294932 denotes 41
T52569 190-192 12524538 denotes 42
T47052 190-192 16237062 denotes 42
T12050 190-192 16476055 denotes 42
T38379 190-192 11544451 denotes 42

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T13967 0-13 RB denotes Interestingly
T13968 13-14 -COMMA- denotes ,
T13969 15-17 IN denotes as
T13970 18-20 PRP denotes we
T13971 21-24 CC denotes and
T13972 25-31 NN denotes others
T13973 32-42 RB denotes previously
T13974 43-52 VB denotes described
T13975 52-53 -COMMA- denotes ,
T13976 54-69 JJ denotes FOXP3-promoting
T13977 70-77 NN denotes factors
T13978 77-78 -COMMA- denotes ,
T13979 79-83 JJ denotes such
T13980 84-86 IN denotes as
T13981 87-100 NN denotes dexamethasone
T13982 101-102 -LRB- denotes [
T13983 102-104 CD denotes 39
T13984 104-105 -RRB- denotes ]
T13985 105-106 -COMMA- denotes ,
T13986 107-113 NN denotes CTLA-4
T13987 114-115 -LRB- denotes [
T13988 115-117 CD denotes 40
T13989 117-118 -RRB- denotes ]
T13990 118-119 -COMMA- denotes ,
T13991 120-123 CC denotes and
T13992 124-133 NN denotes estrogens
T13993 134-135 -LRB- denotes [
T13994 135-137 CD denotes 41
T13995 137-138 -RRB- denotes ]
T13996 138-139 -COMMA- denotes ,
T13997 140-143 VB denotes are
T13998 144-148 RB denotes also
T13999 149-154 VB denotes known
T14000 155-157 IN denotes as
T14001 158-168 NN denotes inhibitors
T14002 169-171 IN denotes of
T14003 172-177 NN denotes GATA3
T14004 178-188 NN denotes expression
T14005 189-190 -LRB- denotes [
T14006 190-195 CD denotes 42–45
T14007 195-196 -RRB- denotes ]
R10353 T13967 T13968 arg1Of Interestingly,","
R10354 T13969 T13968 arg2Of as,","
R10355 T13972 T13969 arg2Of others,as
R10356 T13972 T13970 arg1Of others,we
R10357 T13972 T13971 arg1Of others,and
R10358 T13972 T13973 arg1Of others,previously
R10359 T13974 T13975 arg1Of described,","
R10360 T13976 T13975 arg2Of FOXP3-promoting,","
R10361 T13977 T13974 arg1Of factors,described
R10362 T13977 T13976 arg1Of factors,FOXP3-promoting
R10363 T13977 T13978 arg1Of factors,","
R10364 T13977 T13980 arg1Of factors,as
R10365 T13977 T13991 arg1Of factors,and
R10366 T13980 T13979 arg1Of as,such
R10367 T13981 T13982 arg1Of dexamethasone,[
R10368 T13981 T13985 arg1Of dexamethasone,","
R10369 T13983 T13982 arg2Of 39,[
R10370 T13984 T13982 arg3Of ],[
R10371 T13985 T13980 arg2Of ",",as
R10372 T13986 T13985 arg2Of CTLA-4,","
R10373 T13986 T13987 arg1Of CTLA-4,[
R10374 T13988 T13987 arg2Of 40,[
R10375 T13989 T13987 arg3Of ],[
R10376 T13991 T13990 arg1Of and,","
R10377 T13991 T13997 arg1Of and,are
R10378 T13991 T13999 arg2Of and,known
R10379 T13992 T13991 arg2Of estrogens,and
R10380 T13992 T13993 arg1Of estrogens,[
R10381 T13994 T13993 arg2Of 41,[
R10382 T13995 T13993 arg3Of ],[
R10383 T13999 T13967 arg1Of known,Interestingly
R10384 T13999 T13969 arg1Of known,as
R10385 T13999 T13996 arg1Of known,","
R10386 T13999 T13997 arg2Of known,are
R10387 T13999 T13998 arg1Of known,also
R10388 T13999 T14000 arg1Of known,as
R10389 T14001 T14000 arg2Of inhibitors,as
R10390 T14001 T14002 arg1Of inhibitors,of
R10391 T14004 T14002 arg2Of expression,of
R10392 T14004 T14003 arg1Of expression,GATA3
R10393 T14004 T14005 arg1Of expression,[
R10394 T14006 T14005 arg2Of 42–45,[
R10395 T14007 T14005 arg3Of ],[

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15420 0-13 RB denotes Interestingly
T15421 13-14 , denotes ,
T15422 15-17 IN denotes as
T15423 18-20 PRP denotes we
T15424 21-24 CC denotes and
T15425 25-31 NNS denotes others
T15426 32-42 RB denotes previously
T15427 43-52 VBN denotes described
T15428 52-53 , denotes ,
T15429 54-69 JJ denotes FOXP3-promoting
T15430 70-77 NNS denotes factors
T15431 77-78 , denotes ,
T15432 79-83 JJ denotes such
T15433 84-86 IN denotes as
T15434 87-100 VBN denotes dexamethasone
T15435 101-102 NNP denotes [
T15436 102-104 CD denotes 39
T15437 104-105 NNP denotes ]
T15438 105-106 , denotes ,
T15439 107-113 NNP denotes CTLA-4
T15440 114-115 NNP denotes [
T15441 115-117 CD denotes 40
T15442 117-118 NNP denotes ]
T15443 118-119 , denotes ,
T15444 120-123 CC denotes and
T15445 124-133 VBZ denotes estrogens
T15446 134-135 NNP denotes [
T15447 135-137 CD denotes 41
T15448 137-138 NNP denotes ]
T15449 138-139 , denotes ,
T15450 140-143 VBP denotes are
T15451 144-148 RB denotes also
T15452 149-154 VBN denotes known
T15453 155-157 IN denotes as
T15454 158-168 NNS denotes inhibitors
T15455 169-171 IN denotes of
T15456 172-177 NNP denotes GATA3
T15457 178-188 NN denotes expression
T15458 189-190 NNP denotes [
T15459 190-192 CD denotes 42
T15460 193-195 CD denotes 45
T15461 195-196 NN denotes ]
T15462 196-197 . denotes .
R11697 T15441 T15442 nummod 40,]
R11698 T15442 T15442 ROOT ],]
R11699 T15443 T15442 punct ",",]
R11700 T15444 T15442 cc and,]
R11701 T15445 T15452 nsubjpass estrogens,known
R11702 T15446 T15448 nmod [,]
R11703 T15447 T15448 nummod 41,]
R11704 T15448 T15445 dobj ],estrogens
R11705 T15449 T15450 punct ",",are
R11706 T15450 T15452 auxpass are,known
R11707 T15451 T15452 advmod also,known
R11708 T15452 T15452 ROOT known,known
R11709 T15453 T15452 prep as,known
R11710 T15454 T15453 pobj inhibitors,as
R11711 T15455 T15454 prep of,inhibitors
R11712 T15456 T15457 compound GATA3,expression
R11676 T15420 T15452 advmod Interestingly,known
R11677 T15421 T15452 punct ",",known
R11678 T15422 T15427 mark as,described
R11679 T15423 T15427 nsubj we,described
R11680 T15424 T15423 cc and,we
R11681 T15425 T15423 conj others,we
R11682 T15426 T15427 advmod previously,described
R11683 T15427 T15452 advcl described,known
R11684 T15428 T15430 punct ",",factors
R11685 T15429 T15430 amod FOXP3-promoting,factors
R11686 T15430 T15427 dobj factors,described
R11687 T15431 T15430 punct ",",factors
R11688 T15432 T15433 amod such,as
R11689 T15433 T15430 prep as,factors
R11690 T15434 T15435 compound dexamethasone,[
R11691 T15435 T15437 nmod [,]
R11692 T15436 T15437 nummod 39,]
R11693 T15437 T15433 pobj ],as
R11694 T15438 T15437 punct ",",]
R11695 T15439 T15440 compound CTLA-4,[
R11696 T15440 T15452 nsubjpass [,known
R11713 T15457 T15455 pobj expression,of
R11714 T15458 T15454 conj [,inhibitors
R11715 T15459 T15458 nummod 42,[
R11716 T15460 T15461 nummod 45,]
R11717 T15461 T15458 appos ],[
R11718 T15462 T15452 punct .,known

sentences

Id Subject Object Predicate Lexical cue
T13441 0-197 Sentence denotes Interestingly, as we and others previously described, FOXP3-promoting factors, such as dexamethasone [39], CTLA-4 [40], and estrogens [41], are also known as inhibitors of GATA3 expression [42–45].
T218 0-197 Sentence denotes Interestingly, as we and others previously described, FOXP3-promoting factors, such as dexamethasone [39], CTLA-4 [40], and estrogens [41], are also known as inhibitors of GATA3 expression [42–45].

events-check-again

Id Subject Object Predicate Lexical cue
T17385 54-59 Protein denotes FOXP3
T17386 60-69 Positive_regulation denotes promoting
T17387 107-113 Protein denotes CTLA-4
T17388 158-168 Negative_regulation denotes inhibitors
T17389 172-177 Protein denotes GATA3
T17390 178-188 Gene_expression denotes expression
R13193 T17385 T17386 themeOf FOXP3,promoting
R13195 T17387 T17386 causeOf CTLA-4,promoting
R13196 T17387 T17388 causeOf CTLA-4,inhibitors
R13198 T17389 T17390 themeOf GATA3,expression
R13199 T17390 T17388 themeOf expression,inhibitors

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T13513 60-69 Positive_regulation denotes promoting
T13514 158-168 Negative_regulation denotes inhibitors
T13515 178-188 Gene_expression denotes expression
T13622 54-59 Protein denotes FOXP3
T13623 107-113 Protein denotes CTLA-4
T13624 172-177 Protein denotes GATA3
R9962 T13515 T13514 themeOf expression,inhibitors
R10035 T13622 T13513 themeOf FOXP3,promoting
R10036 T13623 T13513 causeOf CTLA-4,promoting
R10037 T13623 T13514 causeOf CTLA-4,inhibitors
R10038 T13624 T13515 themeOf GATA3,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15001 54-59 Q9BZS1 denotes FOXP3
T15002 172-177 P23771 denotes GATA3

test2

Id Subject Object Predicate Lexical cue Negation
T13264 54-59 Protein denotes FOXP3
T13265 60-69 Positive_regulation denotes promoting
T13266 107-113 Protein denotes CTLA-4
T13267 158-168 Negative_regulation denotes inhibitors
T13268 172-177 Protein denotes GATA3 true
T13269 178-188 Gene_expression denotes expression
R9872 T13264 T13265 themeOf FOXP3,promoting
R9873 T13266 T13265 causeOf CTLA-4,promoting
R9874 T13268 T13269 themeOf GATA3,expression
R9875 T13269 T13267 themeOf expression,inhibitors