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factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
bionlp-st-ge-2016-coref
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bionlp-st-ge-2016-spacy-parsed
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factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
UBERON-AE
{"project":"UBERON-AE","denotations":[{"id":"T57","span":{"begin":285,"end":291},"obj":"http://purl.obolibrary.org/obo/UBERON_0002370"}],"text":"Transcription factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T68","span":{"begin":0,"end":13},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T69","span":{"begin":251,"end":264},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T70","span":{"begin":798,"end":804},"obj":"http://purl.obolibrary.org/obo/GO_0040007"},{"id":"T71","span":{"begin":944,"end":959},"obj":"http://purl.obolibrary.org/obo/GO_2000144"},{"id":"T72","span":{"begin":1033,"end":1044},"obj":"http://purl.obolibrary.org/obo/GO_0032502"},{"id":"T73","span":{"begin":1069,"end":1084},"obj":"http://purl.obolibrary.org/obo/GO_0006955"},{"id":"T74","span":{"begin":1076,"end":1090},"obj":"http://purl.obolibrary.org/obo/GO_0071353"},{"id":"T75","span":{"begin":1076,"end":1090},"obj":"http://purl.obolibrary.org/obo/GO_0070670"},{"id":"T76","span":{"begin":1259,"end":1278},"obj":"http://purl.obolibrary.org/obo/GO_0002507"}],"text":"Transcription factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T631","span":{"begin":561,"end":566},"obj":"http://purl.obolibrary.org/obo/GO_0005136"},{"id":"T632","span":{"begin":1086,"end":1090},"obj":"http://purl.obolibrary.org/obo/GO_0005136"},{"id":"T633","span":{"begin":1192,"end":1196},"obj":"http://purl.obolibrary.org/obo/GO_0005136"},{"id":"T634","span":{"begin":884,"end":891},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"Transcription factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T635","span":{"begin":107,"end":112},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T636","span":{"begin":676,"end":681},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T637","span":{"begin":691,"end":696},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T638","span":{"begin":743,"end":748},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T639","span":{"begin":1123,"end":1127},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Transcription factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
sentences
{"project":"sentences","denotations":[{"id":"T59","span":{"begin":0,"end":228},"obj":"Sentence"},{"id":"T60","span":{"begin":229,"end":416},"obj":"Sentence"},{"id":"T61","span":{"begin":417,"end":527},"obj":"Sentence"},{"id":"T62","span":{"begin":528,"end":623},"obj":"Sentence"},{"id":"T63","span":{"begin":624,"end":845},"obj":"Sentence"},{"id":"T64","span":{"begin":846,"end":968},"obj":"Sentence"},{"id":"T65","span":{"begin":969,"end":1085},"obj":"Sentence"},{"id":"T66","span":{"begin":1086,"end":1334},"obj":"Sentence"},{"id":"T3","span":{"begin":0,"end":228},"obj":"Sentence"},{"id":"T4","span":{"begin":229,"end":416},"obj":"Sentence"},{"id":"T5","span":{"begin":417,"end":527},"obj":"Sentence"},{"id":"T6","span":{"begin":528,"end":623},"obj":"Sentence"},{"id":"T7","span":{"begin":624,"end":845},"obj":"Sentence"},{"id":"T8","span":{"begin":846,"end":968},"obj":"Sentence"},{"id":"T9","span":{"begin":969,"end":1085},"obj":"Sentence"},{"id":"T10","span":{"begin":1086,"end":1334},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Transcription factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
ICD10
{"project":"ICD10","denotations":[{"id":"T630","span":{"begin":1326,"end":1333},"obj":"http://purl.bioontology.org/ontology/ICD10/T78.4"}],"text":"Transcription factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T768","span":{"begin":785,"end":819},"obj":"Protein"},{"id":"T769","span":{"begin":820,"end":828},"obj":"Positive_regulation"},{"id":"T770","span":{"begin":829,"end":834},"obj":"Protein"},{"id":"T771","span":{"begin":835,"end":844},"obj":"Positive_regulation"},{"id":"T772","span":{"begin":865,"end":873},"obj":"Positive_regulation"},{"id":"T773","span":{"begin":884,"end":891},"obj":"Binding"},{"id":"T774","span":{"begin":895,"end":900},"obj":"Protein"},{"id":"T775","span":{"begin":908,"end":913},"obj":"Protein"},{"id":"T776","span":{"begin":914,"end":922},"obj":"Entity"},{"id":"T777","span":{"begin":1086,"end":1090},"obj":"Protein"},{"id":"T778","span":{"begin":1185,"end":1191},"obj":"Regulation"},{"id":"T779","span":{"begin":1185,"end":1191},"obj":"Regulation"},{"id":"T780","span":{"begin":1192,"end":1196},"obj":"Protein"},{"id":"T781","span":{"begin":1200,"end":1205},"obj":"Protein"},{"id":"T758","span":{"begin":229,"end":234},"obj":"Protein"},{"id":"T759","span":{"begin":371,"end":381},"obj":"Regulation"},{"id":"T760","span":{"begin":386,"end":396},"obj":"Gene_expression"},{"id":"T761","span":{"begin":549,"end":562},"obj":"Protein"},{"id":"T762","span":{"begin":564,"end":568},"obj":"Protein"},{"id":"T763","span":{"begin":608,"end":616},"obj":"Negative_regulation"},{"id":"T764","span":{"begin":617,"end":622},"obj":"Protein"},{"id":"T765","span":{"begin":716,"end":730},"obj":"Gene_expression"},{"id":"T766","span":{"begin":731,"end":737},"obj":"Protein"},{"id":"T767","span":{"begin":772,"end":781},"obj":"Negative_regulation"}],"relations":[{"id":"R607","pred":"themeOf","subj":"T780","obj":"T778"},{"id":"R608","pred":"themeOf","subj":"T781","obj":"T779"},{"id":"R658","pred":"themeOf","subj":"T760","obj":"T759"},{"id":"R660","pred":"equivalentTo","subj":"T762","obj":"T761"},{"id":"R599","pred":"causeOf","subj":"T768","obj":"T769"},{"id":"R600","pred":"themeOf","subj":"T769","obj":"T767"},{"id":"R601","pred":"themeOf","subj":"T770","obj":"T771"},{"id":"R602","pred":"themeOf","subj":"T771","obj":"T769"},{"id":"R603","pred":"causeOf","subj":"T773","obj":"T772"},{"id":"R604","pred":"themeOf","subj":"T774","obj":"T773"},{"id":"R605","pred":"themeOf","subj":"T776","obj":"T773"},{"id":"R606","pred":"partOf","subj":"T776","obj":"T775"},{"id":"R657","pred":"themeOf","subj":"T758","obj":"T760"},{"id":"R659","pred":"causeOf","subj":"T761","obj":"T763"},{"id":"R661","pred":"themeOf","subj":"T764","obj":"T763"},{"id":"R662","pred":"themeOf","subj":"T766","obj":"T765"},{"id":"R663","pred":"themeOf","subj":"T767","obj":"T772"}],"attributes":[{"id":"M7","pred":"Speculation","subj":"T759","obj":"true"}],"text":"Transcription factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T647","span":{"begin":205,"end":208},"obj":"Protein"},{"id":"T648","span":{"begin":213,"end":227},"obj":"Protein"},{"id":"T649","span":{"begin":229,"end":234},"obj":"Protein"},{"id":"T650","span":{"begin":386,"end":396},"obj":"Gene_expression"},{"id":"T651","span":{"begin":371,"end":381},"obj":"Regulation"},{"id":"T652","span":{"begin":549,"end":562},"obj":"Protein"},{"id":"T653","span":{"begin":564,"end":568},"obj":"Protein"},{"id":"T654","span":{"begin":617,"end":622},"obj":"Protein"},{"id":"T655","span":{"begin":608,"end":616},"obj":"Negative_regulation"},{"id":"T656","span":{"begin":608,"end":616},"obj":"Negative_regulation"},{"id":"T657","span":{"begin":731,"end":737},"obj":"Protein"},{"id":"T658","span":{"begin":829,"end":834},"obj":"Protein"},{"id":"T659","span":{"begin":716,"end":730},"obj":"Gene_expression"},{"id":"T660","span":{"begin":835,"end":844},"obj":"Positive_regulation"},{"id":"T661","span":{"begin":772,"end":781},"obj":"Negative_regulation"},{"id":"T662","span":{"begin":895,"end":900},"obj":"Protein"},{"id":"T663","span":{"begin":908,"end":922},"obj":"Protein"},{"id":"T664","span":{"begin":884,"end":891},"obj":"Binding"},{"id":"T665","span":{"begin":884,"end":891},"obj":"Binding"},{"id":"T666","span":{"begin":1086,"end":1090},"obj":"Protein"},{"id":"T667","span":{"begin":1185,"end":1196},"obj":"Protein"},{"id":"T668","span":{"begin":1200,"end":1205},"obj":"Protein"}],"relations":[{"id":"R555","pred":"themeOf","subj":"T662","obj":"T665"},{"id":"R556","pred":"themeOf","subj":"T663","obj":"T665"},{"id":"R545","pred":"themeOf","subj":"T649","obj":"T650"},{"id":"R546","pred":"themeOf","subj":"T650","obj":"T651"},{"id":"R547","pred":"causeOf","subj":"T652","obj":"T655"},{"id":"R548","pred":"causeOf","subj":"T653","obj":"T656"},{"id":"R549","pred":"themeOf","subj":"T654","obj":"T655"},{"id":"R550","pred":"themeOf","subj":"T654","obj":"T656"},{"id":"R551","pred":"themeOf","subj":"T657","obj":"T659"},{"id":"R552","pred":"themeOf","subj":"T658","obj":"T660"},{"id":"R553","pred":"themeOf","subj":"T660","obj":"T661"},{"id":"R554","pred":"themeOf","subj":"T662","obj":"T664"}],"text":"Transcription factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T102","span":{"begin":549,"end":562},"obj":"Protein"},{"id":"T103","span":{"begin":564,"end":568},"obj":"Protein"},{"id":"T104","span":{"begin":617,"end":622},"obj":"Protein"},{"id":"T105","span":{"begin":731,"end":737},"obj":"Protein"},{"id":"T106","span":{"begin":785,"end":819},"obj":"Protein"},{"id":"T78","span":{"begin":835,"end":844},"obj":"Positive_regulation"},{"id":"T79","span":{"begin":865,"end":873},"obj":"Positive_regulation"},{"id":"T80","span":{"begin":884,"end":891},"obj":"Binding"},{"id":"T81","span":{"begin":1185,"end":1191},"obj":"Regulation"},{"id":"T82","span":{"begin":1185,"end":1191},"obj":"Regulation"},{"id":"T85","span":{"begin":371,"end":381},"obj":"Regulation"},{"id":"T86","span":{"begin":386,"end":396},"obj":"Gene_expression"},{"id":"T87","span":{"begin":608,"end":616},"obj":"Negative_regulation"},{"id":"T88","span":{"begin":716,"end":730},"obj":"Gene_expression"},{"id":"T89","span":{"begin":772,"end":781},"obj":"Negative_regulation"},{"id":"T90","span":{"begin":820,"end":828},"obj":"Positive_regulation"},{"id":"T92","span":{"begin":829,"end":834},"obj":"Protein"},{"id":"T93","span":{"begin":895,"end":900},"obj":"Protein"},{"id":"T94","span":{"begin":908,"end":913},"obj":"Protein"},{"id":"T95","span":{"begin":1086,"end":1090},"obj":"Protein"},{"id":"T96","span":{"begin":1192,"end":1196},"obj":"Protein"},{"id":"T97","span":{"begin":1200,"end":1205},"obj":"Protein"},{"id":"T100","span":{"begin":914,"end":922},"obj":"Entity"},{"id":"T101","span":{"begin":229,"end":234},"obj":"Protein"}],"relations":[{"id":"R622","pred":"themeOf","subj":"T86","obj":"T85"},{"id":"R623","pred":"themeOf","subj":"T89","obj":"T79"},{"id":"R624","pred":"themeOf","subj":"T90","obj":"T89"},{"id":"R625","pred":"themeOf","subj":"T92","obj":"T78"},{"id":"R626","pred":"themeOf","subj":"T93","obj":"T80"},{"id":"R627","pred":"themeOf","subj":"T96","obj":"T81"},{"id":"R628","pred":"themeOf","subj":"T97","obj":"T82"},{"id":"R631","pred":"themeOf","subj":"T100","obj":"T80"},{"id":"R632","pred":"partOf","subj":"T100","obj":"T94"},{"id":"R633","pred":"themeOf","subj":"T101","obj":"T86"},{"id":"R39","pred":"causeOf","subj":"T102","obj":"T87"},{"id":"R40","pred":"equivalentTo","subj":"T103","obj":"T102"},{"id":"R41","pred":"themeOf","subj":"T104","obj":"T87"},{"id":"R42","pred":"themeOf","subj":"T105","obj":"T88"},{"id":"R43","pred":"causeOf","subj":"T106","obj":"T90"},{"id":"R618","pred":"themeOf","subj":"T78","obj":"T90"},{"id":"R619","pred":"causeOf","subj":"T80","obj":"T79"}],"attributes":[{"id":"M6","pred":"Speculation","subj":"T85","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Transcription factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T341","span":{"begin":229,"end":234},"obj":"Q9BZS1"},{"id":"T342","span":{"begin":549,"end":562},"obj":"P05112"},{"id":"T343","span":{"begin":564,"end":568},"obj":"P05112"},{"id":"T344","span":{"begin":617,"end":622},"obj":"Q9BZS1"},{"id":"T345","span":{"begin":731,"end":737},"obj":"P23771"},{"id":"T346","span":{"begin":829,"end":834},"obj":"Q9BZS1"},{"id":"T347","span":{"begin":895,"end":900},"obj":"P23771"},{"id":"T348","span":{"begin":908,"end":913},"obj":"Q9BZS1"},{"id":"T349","span":{"begin":1086,"end":1090},"obj":"P05112"},{"id":"T350","span":{"begin":1192,"end":1196},"obj":"P05112"},{"id":"T351","span":{"begin":1200,"end":1205},"obj":"P23771"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Transcription factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}
test2
{"project":"test2","denotations":[{"id":"T37","span":{"begin":229,"end":234},"obj":"Protein"},{"id":"T38","span":{"begin":549,"end":562},"obj":"Protein"},{"id":"T39","span":{"begin":564,"end":568},"obj":"Protein"},{"id":"T40","span":{"begin":608,"end":616},"obj":"Negative_regulation"},{"id":"T41","span":{"begin":617,"end":622},"obj":"Protein"},{"id":"T42","span":{"begin":716,"end":730},"obj":"Gene_expression"},{"id":"T43","span":{"begin":731,"end":737},"obj":"Protein"},{"id":"T44","span":{"begin":772,"end":781},"obj":"Negative_regulation"},{"id":"T45","span":{"begin":785,"end":819},"obj":"Protein"},{"id":"T46","span":{"begin":820,"end":828},"obj":"Positive_regulation"},{"id":"T47","span":{"begin":829,"end":834},"obj":"Protein"},{"id":"T48","span":{"begin":835,"end":844},"obj":"Positive_regulation"},{"id":"T49","span":{"begin":884,"end":891},"obj":"Binding"},{"id":"T50","span":{"begin":895,"end":900},"obj":"Protein"},{"id":"T51","span":{"begin":908,"end":913},"obj":"Protein"},{"id":"T52","span":{"begin":914,"end":922},"obj":"Entity"},{"id":"T53","span":{"begin":1086,"end":1090},"obj":"Protein"},{"id":"T54","span":{"begin":1185,"end":1191},"obj":"Binding"},{"id":"T55","span":{"begin":1192,"end":1196},"obj":"Protein"},{"id":"T56","span":{"begin":1200,"end":1205},"obj":"Protein"}],"relations":[{"id":"R27","pred":"causeOf","subj":"T38","obj":"T40"},{"id":"R28","pred":"equivalentTo","subj":"T39","obj":"T38"},{"id":"R29","pred":"themeOf","subj":"T41","obj":"T40"},{"id":"R30","pred":"themeOf","subj":"T43","obj":"T42"},{"id":"R31","pred":"themeOf","subj":"T47","obj":"T48"},{"id":"R32","pred":"themeOf","subj":"T48","obj":"T46"},{"id":"R33","pred":"themeOf","subj":"T50","obj":"T49"},{"id":"R34","pred":"partOf","subj":"T52","obj":"T51"},{"id":"R35","pred":"themeOf","subj":"T52","obj":"T49"},{"id":"R36","pred":"themeOf","subj":"T53","obj":"T54"},{"id":"R37","pred":"themeOf","subj":"T55","obj":"T54"},{"id":"R38","pred":"themeOf","subj":"T56","obj":"T54"}],"text":"Transcription factors act in concert to induce lineage commitment towards Th1, Th2, or T regulatory (Treg) cells, and their counter-regulatory mechanisms were shown to be critical for polarization between Th1 and Th2 phenotypes. FOXP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describe a mechanism controlling iTreg polarization, which is overruled by the Th2 differentiation pathway. We demonstrated that interleukin 4 (IL-4) present at the time of T cell priming inhibits FOXP3. This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction. This inhibition is mediated by direct binding of GATA3 to the FOXP3 promoter, which represses its transactivation process. Therefore, this study provides a new understanding of tolerance development, controlled by a type 2 immune response. IL-4 treatment in mice reduces iTreg cell frequency, highlighting that therapeutic approaches that target IL-4 or GATA3 might provide new preventive strategies facilitating tolerance induction particularly in Th2-mediated diseases, such as allergy.\n"}