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PMC:2222968 / 12323-12633 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5378 0-13 RB denotes Interestingly
T5379 13-14 -COMMA- denotes ,
T5380 15-18 DT denotes the
T5381 19-22 NN denotes Th0
T5382 23-28 NN denotes cells
T5383 29-33 VB denotes were
T5384 34-44 VB denotes expressing
T5385 45-49 JJ denotes more
T5386 50-55 NN denotes FOXP3
T5387 56-60 IN denotes than
T5388 61-64 DT denotes the
T5389 65-68 NN denotes Th2
T5390 69-74 NN denotes cells
T5391 74-75 -COMMA- denotes ,
T5392 76-79 CC denotes but
T5393 80-89 VB denotes expressed
T5394 90-93 JJ denotes low
T5395 94-100 NN denotes levels
T5396 101-103 IN denotes of
T5397 104-109 NN denotes GATA3
T5398 109-110 -COLON- denotes ;
T5399 111-118 RB denotes however
T5400 118-119 -COMMA- denotes ,
T5401 120-123 DT denotes the
T5402 124-131 NN denotes protein
T5403 132-142 NN denotes expression
T5404 143-151 RB denotes slightly
T5405 152-160 VB denotes differed
T5406 161-165 IN denotes from
T5407 166-170 NN denotes mRNA
T5408 171-181 NN denotes expression
T5409 181-182 -COMMA- denotes ,
T5410 183-193 VB denotes suggesting
T5411 194-198 RB denotes also
T5412 199-216 JJ denotes posttranslational
T5413 217-227 NN denotes regulation
T5414 228-231 CC denotes and
T5415 232-243 NN denotes degradation
T5416 244-246 IN denotes as
T5417 247-256 JJ denotes potential
T5418 257-267 JJ denotes additional
T5419 268-278 NN denotes mechanisms
T5420 279-281 IN denotes in
T5421 282-285 DT denotes the
T5422 286-301 NN denotes differentiation
T5423 302-309 NN denotes process
R4157 T5382 T5380 arg1Of cells,the
R4158 T5382 T5381 arg1Of cells,Th0
R4159 T5382 T5383 arg1Of cells,were
R4160 T5382 T5384 arg1Of cells,expressing
R4161 T5382 T5393 arg1Of cells,expressed
R4162 T5384 T5383 arg2Of expressing,were
R4163 T5384 T5392 arg1Of expressing,but
R4164 T5386 T5384 arg2Of FOXP3,expressing
R4165 T5386 T5385 arg1Of FOXP3,more
R4166 T5386 T5387 arg1Of FOXP3,than
R4167 T5390 T5387 arg2Of cells,than
R4168 T5390 T5388 arg1Of cells,the
R4169 T5390 T5389 arg1Of cells,Th2
R4170 T5392 T5378 arg1Of but,Interestingly
R4171 T5392 T5379 arg1Of but,","
R4172 T5392 T5391 arg1Of but,","
R4173 T5393 T5392 arg2Of expressed,but
R4174 T5393 T5398 arg1Of expressed,;
R4175 T5395 T5393 arg2Of levels,expressed
R4176 T5395 T5394 arg1Of levels,low
R4177 T5395 T5396 arg1Of levels,of
R4178 T5397 T5396 arg2Of GATA3,of
R4179 T5403 T5401 arg1Of expression,the
R4180 T5403 T5402 arg1Of expression,protein
R4181 T5403 T5405 arg1Of expression,differed
R4182 T5405 T5398 arg2Of differed,;
R4183 T5405 T5399 arg1Of differed,however
R4184 T5405 T5400 arg1Of differed,","
R4185 T5405 T5404 arg1Of differed,slightly
R4186 T5405 T5406 arg1Of differed,from
R4187 T5405 T5409 arg1Of differed,","
R4188 T5408 T5406 arg2Of expression,from
R4189 T5408 T5407 arg1Of expression,mRNA
R4190 T5410 T5405 arg2Of suggesting,differed
R4191 T5410 T5416 arg1Of suggesting,as
R4192 T5412 T5411 arg1Of posttranslational,also
R4193 T5413 T5414 arg1Of regulation,and
R4194 T5414 T5410 arg2Of and,suggesting
R4195 T5414 T5412 arg1Of and,posttranslational
R4196 T5415 T5414 arg2Of degradation,and
R4197 T5419 T5416 arg2Of mechanisms,as
R4198 T5419 T5417 arg1Of mechanisms,potential
R4199 T5419 T5418 arg1Of mechanisms,additional
R4200 T5419 T5420 arg1Of mechanisms,in
R4201 T5423 T5420 arg2Of process,in
R4202 T5423 T5421 arg1Of process,the
R4203 T5423 T5422 arg1Of process,differentiation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5727 0-13 RB denotes Interestingly
T5728 13-14 , denotes ,
T5729 15-18 DT denotes the
T5730 19-22 JJ denotes Th0
T5731 23-28 NNS denotes cells
T5732 29-33 VBD denotes were
T5733 34-44 VBG denotes expressing
T5734 45-49 RBR denotes more
T5735 50-55 JJ denotes FOXP3
T5736 56-60 IN denotes than
T5737 61-64 DT denotes the
T5738 65-68 JJ denotes Th2
T5739 69-74 NNS denotes cells
T5740 74-75 , denotes ,
T5741 76-79 CC denotes but
T5742 80-89 VBD denotes expressed
T5743 90-93 JJ denotes low
T5744 94-100 NNS denotes levels
T5745 101-103 IN denotes of
T5746 104-109 NNP denotes GATA3
T5747 109-110 : denotes ;
T5748 111-118 RB denotes however
T5749 118-119 , denotes ,
T5750 120-123 DT denotes the
T5751 124-131 NN denotes protein
T5752 132-142 NN denotes expression
T5753 143-151 RB denotes slightly
T5754 152-160 VBD denotes differed
T5755 161-165 IN denotes from
T5756 166-170 NNP denotes mRNA
T5757 171-181 NN denotes expression
T5758 181-182 , denotes ,
T5759 183-193 VBG denotes suggesting
T5760 194-198 RB denotes also
T5761 199-216 JJ denotes posttranslational
T5762 217-227 NN denotes regulation
T5763 228-231 CC denotes and
T5764 232-243 NN denotes degradation
T5765 244-246 IN denotes as
T5766 247-256 JJ denotes potential
T5767 257-267 JJ denotes additional
T5768 268-278 NNS denotes mechanisms
T5769 279-281 IN denotes in
T5770 282-285 DT denotes the
T5771 286-301 NN denotes differentiation
T5772 302-309 NN denotes process
T5773 309-310 . denotes .
R4476 T5727 T5733 advmod Interestingly,expressing
R4477 T5728 T5733 punct ",",expressing
R4478 T5729 T5731 det the,cells
R4479 T5730 T5731 amod Th0,cells
R4480 T5731 T5733 nsubj cells,expressing
R4481 T5732 T5733 aux were,expressing
R4482 T5733 T5754 ccomp expressing,differed
R4483 T5734 T5735 advmod more,FOXP3
R4484 T5735 T5733 dobj FOXP3,expressing
R4485 T5736 T5735 prep than,FOXP3
R4486 T5737 T5739 det the,cells
R4487 T5738 T5739 amod Th2,cells
R4488 T5739 T5736 pobj cells,than
R4489 T5740 T5733 punct ",",expressing
R4490 T5741 T5733 cc but,expressing
R4491 T5742 T5733 conj expressed,expressing
R4492 T5743 T5744 amod low,levels
R4493 T5744 T5742 dobj levels,expressed
R4494 T5745 T5744 prep of,levels
R4495 T5746 T5745 pobj GATA3,of
R4496 T5747 T5754 punct ;,differed
R4497 T5748 T5754 advmod however,differed
R4498 T5749 T5754 punct ",",differed
R4499 T5750 T5752 det the,expression
R4500 T5751 T5752 compound protein,expression
R4501 T5752 T5754 nsubj expression,differed
R4502 T5753 T5754 advmod slightly,differed
R4503 T5754 T5754 ROOT differed,differed
R4504 T5755 T5754 prep from,differed
R4505 T5756 T5757 compound mRNA,expression
R4506 T5757 T5755 pobj expression,from
R4507 T5758 T5754 punct ",",differed
R4508 T5759 T5754 advcl suggesting,differed
R4509 T5760 T5762 advmod also,regulation
R4510 T5761 T5762 amod posttranslational,regulation
R4511 T5762 T5759 dobj regulation,suggesting
R4512 T5763 T5762 cc and,regulation
R4513 T5764 T5762 conj degradation,regulation
R4514 T5765 T5762 prep as,regulation
R4515 T5766 T5768 amod potential,mechanisms
R4516 T5767 T5768 amod additional,mechanisms
R4517 T5768 T5765 pobj mechanisms,as
R4518 T5769 T5768 prep in,mechanisms
R4519 T5770 T5772 det the,process
R4520 T5771 T5772 compound differentiation,process
R4521 T5772 T5769 pobj process,in
R4522 T5773 T5754 punct .,differed

GO-BP

Id Subject Object Predicate Lexical cue
T5218 217-227 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T5219 217-243 http://purl.obolibrary.org/obo/GO_0009894 denotes regulation and degradation
T5220 232-243 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation

GO-CC

Id Subject Object Predicate Lexical cue
T5935 23-28 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5936 69-74 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T5213 0-310 Sentence denotes Interestingly, the Th0 cells were expressing more FOXP3 than the Th2 cells, but expressed low levels of GATA3; however, the protein expression slightly differed from mRNA expression, suggesting also posttranslational regulation and degradation as potential additional mechanisms in the differentiation process.
T94 0-310 Sentence denotes Interestingly, the Th0 cells were expressing more FOXP3 than the Th2 cells, but expressed low levels of GATA3; however, the protein expression slightly differed from mRNA expression, suggesting also posttranslational regulation and degradation as potential additional mechanisms in the differentiation process.

events-check-again

Id Subject Object Predicate Lexical cue Negation
T6130 34-44 Gene_expression denotes expressing
T6131 45-49 Positive_regulation denotes more
T6132 50-55 Protein denotes FOXP3
T6133 80-89 Gene_expression denotes expressed
T6134 90-93 Positive_regulation denotes low true
T6135 104-109 Protein denotes GATA3
R4743 T6130 T6131 themeOf expressing,more
R4744 T6132 T6130 themeOf FOXP3,expressing
R4745 T6133 T6134 themeOf expressed,low
R4746 T6135 T6133 themeOf GATA3,expressed

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T5966 50-55 Protein denotes FOXP3
T5967 104-109 Protein denotes GATA3
T5968 34-44 Gene_expression denotes expressing
T5969 80-89 Gene_expression denotes expressed
R4664 T5966 T5968 themeOf FOXP3,expressing
R4665 T5967 T5969 themeOf GATA3,expressed

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T5187 90-93 Positive_regulation denotes low true
T5188 104-109 Protein denotes GATA3
T5183 34-44 Gene_expression denotes expressing
T5184 45-49 Positive_regulation denotes more
T5185 50-55 Protein denotes FOXP3
T5186 80-89 Gene_expression denotes expressed
R3981 T5183 T5184 themeOf expressing,more
R3982 T5185 T5183 themeOf FOXP3,expressing
R3983 T5186 T5187 themeOf expressed,low
R3984 T5188 T5186 themeOf GATA3,expressed

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5546 50-55 Q9BZS1 denotes FOXP3
T5547 104-109 P23771 denotes GATA3

test2

Id Subject Object Predicate Lexical cue
T5141 34-44 Gene_expression denotes expressing
T5142 50-55 Protein denotes FOXP3
T5143 80-89 Gene_expression denotes expressed
T5144 104-109 Protein denotes GATA3
T5145 132-142 Gene_expression denotes expression
T5146 166-181 Transcription denotes mRNA expression
R3960 T5142 T5141 themeOf FOXP3,expressing
R3961 T5144 T5145 themeOf GATA3,expression
R3962 T5144 T5143 themeOf GATA3,expressed