> top > docs > PMC:2065877 > spans > 604-1125 > annotations

PMC:2065877 / 604-1125 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T168 4-9 NN denotes cells
T169 10-12 FW denotes in
T170 13-18 FW denotes vitro
T171 20-28 NN denotes Lymphoma
T172 29-34 NN denotes cells
T173 35-38 VB denotes are
T174 39-50 JJ denotes independent
T175 51-53 IN denotes of
T176 54-63 NN denotes IL4/Stat6
T177 64-73 NN denotes signaling
T178 74-77 IN denotes for
T179 78-86 NN denotes survival
T180 87-90 CC denotes and
T181 91-104 NN denotes proliferation
T182 104-105 -COMMA- denotes ,
T183 106-109 CC denotes but
T184 110-114 VB denotes have
T185 115-129 RB denotes constitutively
T186 130-139 VB denotes activated
T187 140-145 NN denotes Stat3
T188 146-155 NN denotes signaling
T189 157-162 DT denotes These
T190 163-167 JJ denotes same
T191 168-175 NN denotes targets
T192 176-179 VB denotes are
T193 180-184 RB denotes also
T194 185-196 VB denotes deregulated
T195 197-199 IN denotes in
T196 200-209 JJ denotes wild-type
T197 210-214 NN denotes B-1a
T198 215-224 NN denotes lymphomas
T199 225-229 WDT denotes that
T200 230-235 VB denotes arise
T201 236-249 RB denotes spontaneously
T202 250-257 IN denotes through
T203 258-261 NN denotes age
T204 262-276 NN denotes predisposition
T205 278-283 DT denotes These
T206 284-291 NN denotes results
T207 292-299 VB denotes suggest
T208 300-304 IN denotes that
T209 305-308 NN denotes Akt
T210 308-309 -COMMA- denotes ,
T211 310-314 NN denotes NFκB
T212 314-315 -COMMA- denotes ,
T213 316-319 CC denotes and
T214 320-325 NN denotes Stat3
T215 326-334 NN denotes pathways
T216 335-338 MD denotes may
T217 339-344 VB denotes serve
T218 345-347 IN denotes as
T219 348-357 JJ denotes effective
T220 358-365 NN denotes targets
T221 366-368 IN denotes in
T222 369-372 DT denotes the
T223 373-382 NN denotes treatment
T224 383-385 IN denotes of
T225 386-400 JJ denotes EBV-associated
T226 401-402 NN denotes B
T227 403-407 NN denotes cell
T228 408-417 NN denotes lymphomas
R106 T170 T169 arg1Of vitro,in
R107 T172 T171 arg1Of cells,Lymphoma
R108 T172 T173 arg1Of cells,are
R109 T172 T174 arg1Of cells,independent
R110 T172 T184 arg1Of cells,have
R111 T172 T186 arg1Of cells,activated
R112 T173 T183 arg1Of are,but
R113 T174 T173 arg2Of independent,are
R114 T174 T175 arg1Of independent,of
R115 T177 T175 arg2Of signaling,of
R116 T177 T176 arg1Of signaling,IL4/Stat6
R117 T177 T178 arg1Of signaling,for
R118 T179 T180 arg1Of survival,and
R119 T180 T178 arg2Of and,for
R120 T181 T180 arg2Of proliferation,and
R121 T183 T182 arg1Of but,","
R122 T186 T183 arg2Of activated,but
R123 T186 T184 arg2Of activated,have
R124 T186 T185 arg1Of activated,constitutively
R125 T188 T186 arg2Of signaling,activated
R126 T188 T187 arg1Of signaling,Stat3
R127 T191 T189 arg1Of targets,These
R128 T191 T190 arg1Of targets,same
R129 T191 T192 arg1Of targets,are
R130 T191 T194 arg2Of targets,deregulated
R131 T194 T192 arg2Of deregulated,are
R132 T194 T193 arg1Of deregulated,also
R133 T194 T195 arg1Of deregulated,in
R134 T198 T195 arg2Of lymphomas,in
R135 T198 T196 arg1Of lymphomas,wild-type
R136 T198 T197 arg1Of lymphomas,B-1a
R137 T198 T199 arg1Of lymphomas,that
R138 T198 T200 arg1Of lymphomas,arise
R139 T200 T201 arg1Of arise,spontaneously
R140 T200 T202 arg1Of arise,through
R141 T204 T202 arg2Of predisposition,through
R142 T204 T203 arg1Of predisposition,age
R143 T206 T205 arg1Of results,These
R144 T206 T207 arg1Of results,suggest
R145 T209 T210 arg1Of Akt,","
R146 T210 T213 arg1Of ",",and
R147 T211 T210 arg2Of NFκB,","
R148 T213 T212 arg1Of and,","
R149 T213 T216 arg1Of and,may
R150 T213 T217 arg1Of and,serve
R151 T215 T213 arg2Of pathways,and
R152 T215 T214 arg1Of pathways,Stat3
R153 T217 T207 arg2Of serve,suggest
R154 T217 T208 arg1Of serve,that
R155 T217 T216 arg2Of serve,may
R156 T217 T218 arg1Of serve,as
R157 T220 T218 arg2Of targets,as
R158 T220 T219 arg1Of targets,effective
R159 T220 T221 arg1Of targets,in
R160 T223 T221 arg2Of treatment,in
R161 T223 T222 arg1Of treatment,the
R162 T223 T224 arg1Of treatment,of
R163 T228 T224 arg2Of lymphomas,of
R164 T228 T225 arg1Of lymphomas,EBV-associated
R165 T228 T226 arg1Of lymphomas,B
R166 T228 T227 arg1Of lymphomas,cell

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T229 157-175 Anaphor denotes These same targets
T230 54-57 Antecedent denotes IL4
T231 58-63 Antecedent denotes Stat6
T232 140-145 Antecedent denotes Stat3
R355 T229 T230 boundBy These same targets,IL4
R356 T229 T231 boundBy These same targets,Stat6
R357 T229 T232 boundBy These same targets,Stat3

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T351 4-9 NNS denotes cells
T352 10-12 IN denotes in
T353 13-18 NN denotes vitro
T354 18-19 . denotes .
T355 20-28 NNP denotes Lymphoma
T356 29-34 NNS denotes cells
T357 35-38 VBP denotes are
T358 39-50 JJ denotes independent
T359 51-53 IN denotes of
T360 54-63 NNP denotes IL4/Stat6
T361 64-73 VBG denotes signaling
T362 74-77 IN denotes for
T363 78-86 NN denotes survival
T364 87-90 CC denotes and
T365 91-104 NN denotes proliferation
T366 104-105 , denotes ,
T367 106-109 CC denotes but
T368 110-114 VBP denotes have
T369 115-129 RB denotes constitutively
T370 130-139 VBN denotes activated
T371 140-145 JJ denotes Stat3
T372 146-155 VBG denotes signaling
T373 155-156 . denotes .
T374 157-162 DT denotes These
T375 163-167 JJ denotes same
T376 168-175 NNS denotes targets
T377 176-179 VBP denotes are
T378 180-184 RB denotes also
T379 185-196 VBN denotes deregulated
T380 197-199 IN denotes in
T381 200-209 JJ denotes wild-type
T382 210-214 NN denotes B-1a
T383 215-224 NNS denotes lymphomas
T384 225-229 WDT denotes that
T385 230-235 VBP denotes arise
T386 236-249 RB denotes spontaneously
T387 250-257 IN denotes through
T388 258-261 NN denotes age
T389 262-276 NN denotes predisposition
T390 276-277 . denotes .
T391 278-283 DT denotes These
T392 284-291 NNS denotes results
T393 292-299 VBP denotes suggest
T394 300-304 IN denotes that
T395 305-308 NNP denotes Akt
T396 308-309 , denotes ,
T397 310-314 NNP denotes NFκB
T398 314-315 , denotes ,
T399 316-319 CC denotes and
T400 320-325 JJ denotes Stat3
T401 326-334 NNS denotes pathways
T402 335-338 MD denotes may
T403 339-344 VB denotes serve
T404 345-347 IN denotes as
T405 348-357 JJ denotes effective
T406 358-365 NNS denotes targets
T407 366-368 IN denotes in
T408 369-372 DT denotes the
T409 373-382 NN denotes treatment
T410 383-385 IN denotes of
T411 386-400 JJ denotes EBV-associated
T412 401-402 NNP denotes B
T413 403-407 NN denotes cell
T414 408-417 NNS denotes lymphomas
T415 417-418 . denotes .
R265 T353 T352 pobj vitro,in
R267 T355 T356 compound Lymphoma,cells
R268 T356 T357 nsubj cells,are
R269 T357 T357 ROOT are,are
R270 T358 T357 acomp independent,are
R271 T359 T358 prep of,independent
R272 T360 T359 pobj IL4/Stat6,of
R273 T361 T357 advcl signaling,are
R274 T362 T361 prep for,signaling
R275 T363 T362 pobj survival,for
R276 T364 T363 cc and,survival
R277 T365 T363 conj proliferation,survival
R278 T366 T357 punct ",",are
R279 T367 T357 cc but,are
R280 T368 T370 aux have,activated
R281 T369 T370 advmod constitutively,activated
R282 T370 T357 conj activated,are
R283 T371 T372 amod Stat3,signaling
R284 T372 T370 dobj signaling,activated
R285 T373 T357 punct .,are
R286 T374 T376 det These,targets
R287 T375 T376 amod same,targets
R288 T376 T379 nsubjpass targets,deregulated
R289 T377 T379 auxpass are,deregulated
R290 T378 T379 advmod also,deregulated
R291 T379 T379 ROOT deregulated,deregulated
R292 T380 T379 prep in,deregulated
R293 T381 T383 amod wild-type,lymphomas
R294 T382 T383 compound B-1a,lymphomas
R295 T383 T380 pobj lymphomas,in
R296 T384 T385 nsubj that,arise
R297 T385 T383 relcl arise,lymphomas
R298 T386 T385 advmod spontaneously,arise
R299 T387 T385 prep through,arise
R300 T388 T389 compound age,predisposition
R301 T389 T387 pobj predisposition,through
R302 T390 T379 punct .,deregulated
R303 T391 T392 det These,results
R304 T392 T393 nsubj results,suggest
R305 T393 T393 ROOT suggest,suggest
R306 T394 T403 mark that,serve
R307 T395 T403 nsubj Akt,serve
R308 T396 T395 punct ",",Akt
R309 T397 T395 conj NFκB,Akt
R310 T398 T397 punct ",",NFκB
R311 T399 T397 cc and,NFκB
R312 T400 T401 amod Stat3,pathways
R313 T401 T397 conj pathways,NFκB
R314 T402 T403 aux may,serve
R315 T403 T393 ccomp serve,suggest
R316 T404 T403 prep as,serve
R317 T405 T406 amod effective,targets
R318 T406 T404 pobj targets,as
R319 T407 T406 prep in,targets
R320 T408 T409 det the,treatment
R321 T409 T407 pobj treatment,in
R322 T410 T409 prep of,treatment
R323 T411 T414 amod EBV-associated,lymphomas
R324 T412 T413 compound B,cell
R325 T413 T414 compound cell,lymphomas
R326 T414 T410 pobj lymphomas,of
R327 T415 T393 punct .,suggest

GO-BP

Id Subject Object Predicate Lexical cue
T69 258-261 http://purl.obolibrary.org/obo/GO_0007568 denotes age
T71 64-73 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T72 146-155 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

GO-CC

Id Subject Object Predicate Lexical cue
T427 4-9 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T428 29-34 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T429 403-407 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T64 20-156 Sentence denotes Lymphoma cells are independent of IL4/Stat6 signaling for survival and proliferation, but have constitutively activated Stat3 signaling.
T65 157-277 Sentence denotes These same targets are also deregulated in wild-type B-1a lymphomas that arise spontaneously through age predisposition.
T66 278-418 Sentence denotes These results suggest that Akt, NFκB, and Stat3 pathways may serve as effective targets in the treatment of EBV-associated B cell lymphomas.
T7 20-156 Sentence denotes Lymphoma cells are independent of IL4/Stat6 signaling for survival and proliferation, but have constitutively activated Stat3 signaling.
T8 157-277 Sentence denotes These same targets are also deregulated in wild-type B-1a lymphomas that arise spontaneously through age predisposition.
T9 278-418 Sentence denotes These results suggest that Akt, NFκB, and Stat3 pathways may serve as effective targets in the treatment of EBV-associated B cell lymphomas.
T10 420-434 Sentence denotes Author Summary

events-check-again

Id Subject Object Predicate Lexical cue Negation
T508 54-57 Protein denotes IL4
T509 58-63 Protein denotes Stat6
T510 140-145 Protein denotes Stat3
T511 185-196 Regulation denotes deregulated true
T512 185-196 Regulation denotes deregulated true
T513 185-196 Regulation denotes deregulated true
T514 305-308 Protein denotes Akt
T515 320-325 Protein denotes Stat3
R375 T508 T513 themeOf IL4,deregulated
R376 T509 T511 themeOf Stat6,deregulated
R377 T510 T512 themeOf Stat3,deregulated

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T489 54-57 Protein denotes IL4
T490 58-63 Protein denotes Stat6
T491 140-145 Protein denotes Stat3
T492 305-308 Protein denotes Akt
T493 310-314 Protein denotes NFκB
T494 320-325 Protein denotes Stat3

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T57 305-308 Protein denotes Akt
T58 320-325 Protein denotes Stat3
T51 54-57 Protein denotes IL4
T52 58-63 Protein denotes Stat6
T53 140-145 Protein denotes Stat3
T54 185-196 Regulation denotes deregulated true
T55 185-196 Regulation denotes deregulated true
T56 185-196 Regulation denotes deregulated true
R352 T51 T56 themeOf IL4,deregulated
R353 T52 T54 themeOf Stat6,deregulated
R354 T53 T55 themeOf Stat3,deregulated

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T249 305-308 P31749 denotes Akt
T250 305-308 P31751 denotes Akt
T251 305-308 Q9Y243 denotes Akt
T252 320-325 P40763 denotes Stat3
T246 54-57 P05112 denotes IL4
T247 58-63 P42226 denotes Stat6
T248 140-145 P40763 denotes Stat3

test2

Id Subject Object Predicate Lexical cue
T32 54-57 Protein denotes IL4
T33 58-63 Protein denotes Stat6
T34 130-139 Positive_regulation denotes activated
T35 140-145 Protein denotes Stat3
T36 305-308 Protein denotes Akt
T37 320-325 Protein denotes Stat3