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PMC:1942070 / 1115-1428 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
17349631-10859332-30580518 233-234 10859332 denotes 3
17349631-12506120-30580518 233-234 12506120 denotes 3

MyTest

Id Subject Object Predicate Lexical cue
17349631-10859332-30580518 233-234 10859332 denotes 3
17349631-12506120-30580518 233-234 12506120 denotes 3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T543 1-6 CD denotes three
T544 7-14 NN denotes members
T545 14-15 -COLON- denotes :
T546 16-20 NN denotes PKD1
T547 20-21 -COMMA- denotes ,
T548 22-26 NN denotes PKD2
T549 27-30 CC denotes and
T550 31-35 NN denotes PKD3
T551 37-41 JJ denotes Most
T552 42-46 NN denotes cell
T553 47-52 NN denotes types
T554 53-60 VB denotes express
T555 61-63 IN denotes at
T556 64-69 JJ denotes least
T557 70-73 CD denotes two
T558 74-77 NN denotes PKD
T559 78-86 NN denotes isoforms
T560 87-90 CC denotes but
T561 91-94 NN denotes PKD
T562 95-102 NN denotes enzymes
T563 103-106 VB denotes are
T564 107-117 RB denotes especially
T565 118-124 RB denotes highly
T566 125-134 VB denotes expressed
T567 135-137 IN denotes in
T568 138-152 JJ denotes haematopoietic
T569 153-158 NN denotes cells
T570 158-159 -COMMA- denotes ,
T571 160-165 WRB denotes where
T572 166-170 PRP denotes they
T573 171-174 VB denotes are
T574 175-184 VB denotes activated
T575 185-187 IN denotes in
T576 188-196 NN denotes response
T577 197-199 TO denotes to
T578 200-207 NN denotes antigen
T579 208-217 NN denotes receptors
T580 218-229 NN denotes stimulation
T581 230-231 -LRB- denotes [
T582 231-234 CD denotes 2,3
T583 234-235 -RRB- denotes ]
T584 237-238 DT denotes A
T585 239-248 VB denotes conserved
T586 249-259 NN denotes signalling
T587 260-267 NN denotes pathway
T588 268-275 VB denotes linking
T589 276-283 NN denotes antigen
T590 284-293 NN denotes receptors
T591 294-296 TO denotes to
T592 297-301 NN denotes PKDs
T593 302-310 VB denotes involves
R441 T544 T543 arg1Of members,three
R442 T544 T545 arg1Of members,:
R443 T546 T547 arg1Of PKD1,","
R444 T547 T549 arg1Of ",",and
R445 T548 T547 arg2Of PKD2,","
R446 T549 T545 arg2Of and,:
R447 T550 T549 arg2Of PKD3,and
R448 T553 T551 arg1Of types,Most
R449 T553 T552 arg1Of types,cell
R450 T553 T554 arg1Of types,express
R451 T554 T560 arg1Of express,but
R452 T557 T555 arg1Of two,at
R453 T557 T556 arg1Of two,least
R454 T559 T554 arg2Of isoforms,express
R455 T559 T557 arg1Of isoforms,two
R456 T559 T558 arg1Of isoforms,PKD
R457 T562 T561 arg1Of enzymes,PKD
R458 T562 T563 arg1Of enzymes,are
R459 T562 T566 arg2Of enzymes,expressed
R460 T565 T564 arg1Of highly,especially
R461 T566 T560 arg2Of expressed,but
R462 T566 T563 arg2Of expressed,are
R463 T566 T565 arg1Of expressed,highly
R464 T566 T567 arg1Of expressed,in
R465 T569 T567 arg2Of cells,in
R466 T569 T568 arg1Of cells,haematopoietic
R467 T569 T570 arg1Of cells,","
R468 T569 T571 arg1Of cells,where
R469 T572 T573 arg1Of they,are
R470 T572 T574 arg2Of they,activated
R471 T574 T571 arg2Of activated,where
R472 T574 T573 arg2Of activated,are
R473 T574 T575 arg1Of activated,in
R474 T574 T581 arg1Of activated,[
R475 T575 T577 arg1Of in,to
R476 T576 T575 arg2Of response,in
R477 T580 T575 arg3Of stimulation,in
R478 T580 T578 arg1Of stimulation,antigen
R479 T580 T579 arg1Of stimulation,receptors
R480 T582 T581 arg2Of "2,3",[
R481 T583 T581 arg3Of ],[
R482 T587 T584 arg1Of pathway,A
R483 T587 T585 arg2Of pathway,conserved
R484 T587 T586 arg1Of pathway,signalling
R485 T587 T588 arg1Of pathway,linking
R486 T587 T593 arg1Of pathway,involves
R487 T590 T588 arg2Of receptors,linking
R488 T590 T589 arg1Of receptors,antigen
R489 T590 T591 arg1Of receptors,to
R490 T592 T591 arg2Of PKDs,to

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1019 1-6 CD denotes three
T1020 7-14 NNS denotes members
T1021 14-15 : denotes :
T1022 16-20 NNP denotes PKD1
T1023 20-21 , denotes ,
T1024 22-26 NNP denotes PKD2
T1025 27-30 CC denotes and
T1026 31-35 NNP denotes PKD3
T1027 35-36 . denotes .
T1028 37-41 JJS denotes Most
T1029 42-46 NN denotes cell
T1030 47-52 NNS denotes types
T1031 53-60 VBP denotes express
T1032 61-63 IN denotes at
T1033 64-69 JJS denotes least
T1034 70-73 CD denotes two
T1035 74-77 NNP denotes PKD
T1036 78-86 NNS denotes isoforms
T1037 87-90 CC denotes but
T1038 91-94 NNP denotes PKD
T1039 95-102 NNS denotes enzymes
T1040 103-106 VBP denotes are
T1041 107-117 RB denotes especially
T1042 118-124 RB denotes highly
T1043 125-134 VBN denotes expressed
T1044 135-137 IN denotes in
T1045 138-152 JJ denotes haematopoietic
T1046 153-158 NNS denotes cells
T1047 158-159 , denotes ,
T1048 160-165 WRB denotes where
T1049 166-170 PRP denotes they
T1050 171-174 VBP denotes are
T1051 175-184 VBN denotes activated
T1052 185-187 IN denotes in
T1053 188-196 NN denotes response
T1054 197-199 TO denotes to
T1055 200-207 NN denotes antigen
T1056 208-217 NNS denotes receptors
T1057 218-229 NN denotes stimulation
T1058 230-231 NNP denotes [
T1059 231-234 CD denotes 2,3
T1060 234-235 NNP denotes ]
T1061 235-236 . denotes .
T1062 237-238 DT denotes A
T1063 239-248 JJ denotes conserved
T1064 249-259 JJ denotes signalling
T1065 260-267 NN denotes pathway
T1066 268-275 VBG denotes linking
T1067 276-283 NN denotes antigen
T1068 284-293 NNS denotes receptors
T1069 294-296 TO denotes to
T1070 297-301 NNS denotes PKDs
T1071 302-310 VBZ denotes involves
R905 T1019 T1020 nummod three,members
R908 T1022 T1022 ROOT PKD1,PKD1
R909 T1023 T1022 punct ",",PKD1
R910 T1024 T1022 conj PKD2,PKD1
R911 T1025 T1024 cc and,PKD2
R912 T1026 T1024 conj PKD3,PKD2
R914 T1028 T1030 amod Most,types
R915 T1029 T1030 compound cell,types
R916 T1030 T1031 nsubj types,express
R917 T1031 T1031 ROOT express,express
R918 T1032 T1033 advmod at,least
R919 T1033 T1034 advmod least,two
R920 T1034 T1036 nummod two,isoforms
R921 T1035 T1036 compound PKD,isoforms
R922 T1036 T1031 dobj isoforms,express
R923 T1037 T1031 cc but,express
R924 T1038 T1039 compound PKD,enzymes
R925 T1039 T1040 nsubj enzymes,are
R926 T1040 T1043 auxpass are,expressed
R927 T1041 T1042 advmod especially,highly
R928 T1042 T1043 advmod highly,expressed
R929 T1043 T1031 conj expressed,express
R930 T1044 T1043 prep in,expressed
R931 T1045 T1046 amod haematopoietic,cells
R932 T1046 T1044 pobj cells,in
R933 T1047 T1043 punct ",",expressed
R934 T1048 T1051 advmod where,activated
R935 T1049 T1051 nsubjpass they,activated
R936 T1050 T1051 auxpass are,activated
R937 T1051 T1043 advcl activated,expressed
R938 T1052 T1051 prep in,activated
R939 T1053 T1052 pobj response,in
R940 T1054 T1053 prep to,response
R941 T1055 T1056 compound antigen,receptors
R942 T1056 T1057 compound receptors,stimulation
R943 T1057 T1054 pobj stimulation,to
R944 T1058 T1060 compound [,]
R945 T1059 T1060 compound "2,3",]
R946 T1060 T1057 appos ],stimulation
R947 T1061 T1043 punct .,expressed
R948 T1062 T1065 det A,pathway
R949 T1063 T1065 amod conserved,pathway
R950 T1064 T1065 amod signalling,pathway
R951 T1065 T1071 nsubj pathway,involves
R952 T1066 T1065 acl linking,pathway
R953 T1067 T1068 compound antigen,receptors
R954 T1068 T1066 dobj receptors,linking
R955 T1069 T1066 prep to,linking
R956 T1070 T1069 pobj PKDs,to
R957 T1071 T1071 ROOT involves,involves

GO-BP

Id Subject Object Predicate Lexical cue
T504 249-259 http://purl.obolibrary.org/obo/GO_0023052 denotes signalling
T506 249-267 http://purl.obolibrary.org/obo/GO_0007165 denotes signalling pathway

GO-CC

Id Subject Object Predicate Lexical cue
T1486 42-46 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T490 37-236 Sentence denotes Most cell types express at least two PKD isoforms but PKD enzymes are especially highly expressed in haematopoietic cells, where they are activated in response to antigen receptors stimulation [2,3].
T13 37-236 Sentence denotes Most cell types express at least two PKD isoforms but PKD enzymes are especially highly expressed in haematopoietic cells, where they are activated in response to antigen receptors stimulation [2,3].

events-check-again

Id Subject Object Predicate Lexical cue
T1575 16-20 Protein denotes PKD1
T1576 22-26 Protein denotes PKD2
T1577 31-35 Protein denotes PKD3

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T1591 16-20 Protein denotes PKD1
T1592 22-26 Protein denotes PKD2
T1593 31-35 Protein denotes PKD3
T1594 74-77 Protein denotes PKD
T1595 91-94 Protein denotes PKD
T1596 53-60 Gene_expression denotes express
T1597 125-134 Gene_expression denotes expressed
T1598 297-301 Protein denotes PKDs
R1401 T1594 T1596 themeOf PKD,express
R1407 T1595 T1597 themeOf PKD,expressed

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T476 16-20 Protein denotes PKD1
T477 22-26 Protein denotes PKD2
T478 31-35 Protein denotes PKD3

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T986 16-20 P98161 denotes PKD1
T987 31-35 Q99853 denotes PKD3

test2

Id Subject Object Predicate Lexical cue
T463 16-20 Protein denotes PKD1
T464 22-26 Protein denotes PKD2
T465 31-35 Protein denotes PKD3