PMC:1920263 / 1720-2002
Annnotations
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T758 | 6-14 | Protein | denotes | APOBEC3G |
T759 | 16-19 | Protein | denotes | A3G |
T760 | 149-159 | Negative_regulation | denotes | inhibition |
T761 | 163-188 | Protein | denotes | virion infectivity factor |
T762 | 190-193 | Protein | denotes | Vif |
T763 | 195-202 | Negative_regulation | denotes | deleted |
R618 | T759 | T758 | equivalentTo | A3G,APOBEC3G |
R619 | T761 | T760 | themeOf | virion infectivity factor,inhibition |
R620 | T761 | T763 | themeOf | virion infectivity factor,deleted |
R621 | T762 | T761 | equivalentTo | Vif,virion infectivity factor |
ICD10
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1983 | 209-225 | http://purl.bioontology.org/ontology/ICD10/D84.9 | denotes | immunodeficiency |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1984 | 163-169 | http://purl.obolibrary.org/obo/GO_0019012 | denotes | virion |
T1985 | 272-277 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T866 | 97-105 | http://purl.obolibrary.org/obo/GO_0007349 | denotes | cellular |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1505 | 0-5 | NNP | denotes | Human |
T1506 | 6-14 | NNP | denotes | APOBEC3G |
T1507 | 15-16 | -LRB- | denotes | ( |
T1508 | 16-19 | NNP | denotes | A3G |
T1509 | 19-20 | -RRB- | denotes | ) |
T1510 | 20-21 | , | denotes | , |
T1511 | 22-25 | DT | denotes | the |
T1512 | 26-30 | RBS | denotes | most |
T1513 | 31-40 | JJ | denotes | prominent |
T1514 | 41-47 | NN | denotes | member |
T1515 | 48-50 | IN | denotes | of |
T1516 | 51-54 | DT | denotes | the |
T1517 | 55-62 | NNP | denotes | APOBEC3 |
T1518 | 63-69 | NN | denotes | family |
T1519 | 70-73 | VBZ | denotes | has |
T1520 | 74-78 | VBN | denotes | been |
T1521 | 79-89 | VBN | denotes | identified |
T1522 | 90-92 | IN | denotes | as |
T1523 | 93-96 | DT | denotes | the |
T1524 | 97-105 | JJ | denotes | cellular |
T1525 | 106-117 | NN | denotes | restriction |
T1526 | 118-124 | NN | denotes | factor |
T1527 | 125-129 | WDT | denotes | that |
T1528 | 130-132 | VBZ | denotes | is |
T1529 | 133-144 | JJ | denotes | responsible |
T1530 | 145-148 | IN | denotes | for |
T1531 | 149-159 | NN | denotes | inhibition |
T1532 | 160-162 | IN | denotes | of |
T1533 | 163-169 | NN | denotes | virion |
T1534 | 170-181 | NN | denotes | infectivity |
T1535 | 182-188 | NN | denotes | factor |
T1536 | 189-190 | -LRB- | denotes | ( |
T1537 | 190-193 | NNP | denotes | Vif |
T1538 | 193-194 | -RRB- | denotes | ) |
T1539 | 194-195 | : | denotes | - |
T1540 | 195-202 | VBN | denotes | deleted |
T1541 | 203-208 | JJ | denotes | human |
T1542 | 209-225 | NN | denotes | immunodeficiency |
T1543 | 226-233 | JJ | denotes | virus-1 |
T1544 | 234-235 | -LRB- | denotes | ( |
T1545 | 235-240 | NNP | denotes | HIV-1 |
T1546 | 240-241 | -RRB- | denotes | ) |
T1547 | 242-253 | NN | denotes | replication |
T1548 | 254-256 | IN | denotes | in |
T1549 | 257-271 | JJ | denotes | non-permissive |
T1550 | 272-277 | NNS | denotes | cells |
T1551 | 278-279 | -LRB- | denotes | ( |
T1552 | 279-280 | CD | denotes | 4 |
T1553 | 280-281 | -RRB- | denotes | ) |
T1554 | 281-282 | . | denotes | . |
R1254 | T1505 | T1506 | compound | Human,APOBEC3G |
R1255 | T1506 | T1521 | nsubjpass | APOBEC3G,identified |
R1256 | T1507 | T1508 | punct | (,A3G |
R1257 | T1508 | T1506 | appos | A3G,APOBEC3G |
R1258 | T1509 | T1506 | punct | ),APOBEC3G |
R1259 | T1510 | T1506 | punct | ",",APOBEC3G |
R1260 | T1511 | T1514 | det | the,member |
R1261 | T1512 | T1513 | advmod | most,prominent |
R1262 | T1513 | T1514 | amod | prominent,member |
R1263 | T1514 | T1506 | appos | member,APOBEC3G |
R1264 | T1515 | T1514 | prep | of,member |
R1265 | T1516 | T1518 | det | the,family |
R1266 | T1517 | T1518 | compound | APOBEC3,family |
R1267 | T1518 | T1515 | pobj | family,of |
R1268 | T1519 | T1521 | aux | has,identified |
R1269 | T1520 | T1521 | auxpass | been,identified |
R1270 | T1521 | T1521 | ROOT | identified,identified |
R1271 | T1522 | T1521 | prep | as,identified |
R1272 | T1523 | T1526 | det | the,factor |
R1273 | T1524 | T1526 | amod | cellular,factor |
R1274 | T1525 | T1526 | compound | restriction,factor |
R1275 | T1526 | T1522 | pobj | factor,as |
R1276 | T1527 | T1528 | nsubj | that,is |
R1277 | T1528 | T1526 | relcl | is,factor |
R1278 | T1529 | T1528 | acomp | responsible,is |
R1279 | T1530 | T1529 | prep | for,responsible |
R1280 | T1531 | T1530 | pobj | inhibition,for |
R1281 | T1532 | T1531 | prep | of,inhibition |
R1282 | T1533 | T1535 | compound | virion,factor |
R1283 | T1534 | T1535 | compound | infectivity,factor |
R1284 | T1535 | T1532 | pobj | factor,of |
R1285 | T1536 | T1537 | punct | (,Vif |
R1286 | T1537 | T1535 | appos | Vif,factor |
R1287 | T1538 | T1537 | punct | ),Vif |
R1288 | T1539 | T1535 | punct | -,factor |
R1289 | T1540 | T1543 | amod | deleted,virus-1 |
R1290 | T1541 | T1542 | amod | human,immunodeficiency |
R1291 | T1542 | T1543 | compound | immunodeficiency,virus-1 |
R1292 | T1543 | T1535 | appos | virus-1,factor |
R1293 | T1544 | T1547 | punct | (,replication |
R1294 | T1545 | T1547 | nmod | HIV-1,replication |
R1295 | T1546 | T1547 | punct | ),replication |
R1296 | T1547 | T1543 | appos | replication,virus-1 |
R1297 | T1548 | T1547 | prep | in,replication |
R1298 | T1549 | T1550 | amod | non-permissive,cells |
R1299 | T1550 | T1548 | pobj | cells,in |
R1300 | T1551 | T1547 | punct | (,replication |
R1301 | T1552 | T1547 | dep | 4,replication |
R1302 | T1553 | T1547 | punct | ),replication |
R1303 | T1554 | T1521 | punct | .,identified |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T850 | 0-282 | Sentence | denotes | Human APOBEC3G (A3G), the most prominent member of the APOBEC3 family has been identified as the cellular restriction factor that is responsible for inhibition of virion infectivity factor (Vif)-deleted human immunodeficiency virus-1 (HIV-1) replication in non-permissive cells (4). |
T14 | 0-282 | Sentence | denotes | Human APOBEC3G (A3G), the most prominent member of the APOBEC3 family has been identified as the cellular restriction factor that is responsible for inhibition of virion infectivity factor (Vif)-deleted human immunodeficiency virus-1 (HIV-1) replication in non-permissive cells (4). |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
17517765-12167863-77155577 | 279-280 | 12167863 | denotes | 4 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T939 | 0-5 | JJ | denotes | Human |
T940 | 6-14 | NN | denotes | APOBEC3G |
T941 | 15-16 | -LRB- | denotes | ( |
T942 | 16-19 | NN | denotes | A3G |
T943 | 19-20 | -RRB- | denotes | ) |
T944 | 20-21 | -COMMA- | denotes | , |
T945 | 22-25 | DT | denotes | the |
T946 | 26-30 | RB | denotes | most |
T947 | 31-40 | JJ | denotes | prominent |
T948 | 41-47 | NN | denotes | member |
T949 | 48-50 | IN | denotes | of |
T950 | 51-54 | DT | denotes | the |
T951 | 55-62 | NN | denotes | APOBEC3 |
T952 | 63-69 | NN | denotes | family |
T953 | 70-73 | VB | denotes | has |
T954 | 74-78 | VB | denotes | been |
T955 | 79-89 | VB | denotes | identified |
T956 | 90-92 | IN | denotes | as |
T957 | 93-96 | DT | denotes | the |
T958 | 97-105 | JJ | denotes | cellular |
T959 | 106-117 | NN | denotes | restriction |
T960 | 118-124 | NN | denotes | factor |
T961 | 125-129 | WDT | denotes | that |
T962 | 130-132 | VB | denotes | is |
T963 | 133-144 | JJ | denotes | responsible |
T964 | 145-148 | IN | denotes | for |
T965 | 149-159 | NN | denotes | inhibition |
T966 | 160-162 | IN | denotes | of |
T967 | 163-169 | NN | denotes | virion |
T968 | 170-181 | NN | denotes | infectivity |
T969 | 182-188 | NN | denotes | factor |
T970 | 189-190 | -LRB- | denotes | ( |
T971 | 190-193 | NN | denotes | Vif |
T972 | 193-194 | -RRB- | denotes | ) |
T973 | 194-202 | JJ | denotes | -deleted |
T974 | 203-208 | JJ | denotes | human |
T975 | 209-225 | NN | denotes | immunodeficiency |
T976 | 226-233 | NN | denotes | virus-1 |
T977 | 234-235 | -LRB- | denotes | ( |
T978 | 235-240 | NN | denotes | HIV-1 |
T979 | 240-241 | -RRB- | denotes | ) |
T980 | 242-253 | NN | denotes | replication |
T981 | 254-256 | IN | denotes | in |
T982 | 257-271 | JJ | denotes | non-permissive |
T983 | 272-277 | NN | denotes | cells |
T984 | 278-279 | -LRB- | denotes | ( |
T985 | 279-280 | CD | denotes | 4 |
T986 | 280-281 | -RRB- | denotes | ) |
R719 | T940 | T939 | arg1Of | APOBEC3G,Human |
R720 | T940 | T941 | arg1Of | APOBEC3G,( |
R721 | T940 | T944 | arg1Of | APOBEC3G,"," |
R722 | T940 | T953 | arg1Of | APOBEC3G,has |
R723 | T940 | T954 | arg1Of | APOBEC3G,been |
R724 | T940 | T955 | arg2Of | APOBEC3G,identified |
R725 | T942 | T941 | arg2Of | A3G,( |
R726 | T943 | T941 | arg3Of | ),( |
R727 | T947 | T946 | arg1Of | prominent,most |
R728 | T948 | T944 | arg2Of | member,"," |
R729 | T948 | T945 | arg1Of | member,the |
R730 | T948 | T947 | arg1Of | member,prominent |
R731 | T948 | T949 | arg1Of | member,of |
R732 | T952 | T949 | arg2Of | family,of |
R733 | T952 | T950 | arg1Of | family,the |
R734 | T952 | T951 | arg1Of | family,APOBEC3 |
R735 | T955 | T953 | arg2Of | identified,has |
R736 | T955 | T954 | arg2Of | identified,been |
R737 | T955 | T956 | arg1Of | identified,as |
R738 | T960 | T956 | arg2Of | factor,as |
R739 | T960 | T957 | arg1Of | factor,the |
R740 | T960 | T958 | arg1Of | factor,cellular |
R741 | T960 | T959 | arg1Of | factor,restriction |
R742 | T960 | T961 | arg1Of | factor,that |
R743 | T960 | T962 | arg1Of | factor,is |
R744 | T960 | T963 | arg1Of | factor,responsible |
R745 | T963 | T962 | arg2Of | responsible,is |
R746 | T963 | T964 | arg1Of | responsible,for |
R747 | T965 | T964 | arg2Of | inhibition,for |
R748 | T965 | T966 | arg1Of | inhibition,of |
R749 | T971 | T970 | arg2Of | Vif,( |
R750 | T972 | T970 | arg3Of | ),( |
R751 | T978 | T977 | arg2Of | HIV-1,( |
R752 | T979 | T977 | arg3Of | ),( |
R753 | T980 | T966 | arg2Of | replication,of |
R754 | T980 | T967 | arg1Of | replication,virion |
R755 | T980 | T968 | arg1Of | replication,infectivity |
R756 | T980 | T969 | arg1Of | replication,factor |
R757 | T980 | T970 | arg1Of | replication,( |
R758 | T980 | T973 | arg1Of | replication,-deleted |
R759 | T980 | T974 | arg1Of | replication,human |
R760 | T980 | T975 | arg1Of | replication,immunodeficiency |
R761 | T980 | T976 | arg1Of | replication,virus-1 |
R762 | T980 | T977 | arg1Of | replication,( |
R763 | T980 | T981 | arg1Of | replication,in |
R764 | T983 | T981 | arg2Of | cells,in |
R765 | T983 | T982 | arg1Of | cells,non-permissive |
R766 | T983 | T984 | arg1Of | cells,( |
R767 | T985 | T984 | arg2Of | 4,( |
R768 | T986 | T984 | arg3Of | ),( |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2238 | 6-14 | Protein | denotes | APOBEC3G |
T2239 | 16-19 | Protein | denotes | A3G |
T2240 | 163-188 | Protein | denotes | virion infectivity factor |
T2241 | 190-193 | Protein | denotes | Vif |
T2242 | 195-202 | Negative_regulation | denotes | deleted |
R1828 | T2239 | T2238 | equivalentTo | A3G,APOBEC3G |
R1832 | T2241 | T2240 | equivalentTo | Vif,virion infectivity factor |
R1831 | T2240 | T2242 | themeOf | virion infectivity factor,deleted |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2283 | 0-14 | Protein | denotes | Human APOBEC3G |
T2284 | 16-19 | Protein | denotes | A3G |
T2285 | 55-69 | Protein | denotes | APOBEC3 family |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T805 | 6-14 | Protein | denotes | APOBEC3G |
T806 | 16-19 | Protein | denotes | A3G |
T807 | 163-188 | Protein | denotes | virion infectivity factor |
T808 | 190-193 | Protein | denotes | Vif |
T809 | 195-202 | Negative_regulation | denotes | deleted |
R635 | T806 | T805 | equivalentTo | A3G,APOBEC3G |
R636 | T807 | T809 | themeOf | virion infectivity factor,deleted |
R637 | T808 | T807 | equivalentTo | Vif,virion infectivity factor |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1401 | 6-14 | Q9HC16 | denotes | APOBEC3G |
T1402 | 16-19 | Q9HC16 | denotes | A3G |
T1403 | 163-188 | P12504 | denotes | virion infectivity factor |
T1404 | 190-193 | P12504 | denotes | Vif |