PMC:1920263 / 0-134 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1920263","sourcedb":"PMC","sourceid":"1920263","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1920263","text":"Sp1 and Sp3 regulate basal transcription of the human APOBEC3G gene \n\nAbstract\nAPOBEC3G (A3G), a member of the recently discovered fam","divisions":[{"label":"Title","span":{"begin":0,"end":68}}],"tracks":[{"project":"test2","denotations":[{"id":"T22","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T23","span":{"begin":8,"end":11},"obj":"Protein"},{"id":"T24","span":{"begin":12,"end":20},"obj":"Regulation"},{"id":"T25","span":{"begin":27,"end":40},"obj":"Transcription"},{"id":"T26","span":{"begin":54,"end":62},"obj":"Protein"},{"id":"T27","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T28","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T11310","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T11311","span":{"begin":8,"end":11},"obj":"Protein"}],"relations":[{"id":"R16","pred":"causeOf","subj":"T22","obj":"T24"},{"id":"R17","pred":"causeOf","subj":"T23","obj":"T24"},{"id":"R18","pred":"themeOf","subj":"T25","obj":"T24"},{"id":"R19","pred":"themeOf","subj":"T26","obj":"T25"},{"id":"R21","pred":"equivalentTo","subj":"T28","obj":"T27"}],"attributes":[{"id":"M2","pred":"Negation","subj":"T27","obj":"true"},{"subj":"T22","pred":"source","obj":"test2"},{"subj":"T23","pred":"source","obj":"test2"},{"subj":"T24","pred":"source","obj":"test2"},{"subj":"T25","pred":"source","obj":"test2"},{"subj":"T26","pred":"source","obj":"test2"},{"subj":"T27","pred":"source","obj":"test2"},{"subj":"T28","pred":"source","obj":"test2"},{"subj":"T11310","pred":"source","obj":"test2"},{"subj":"T11311","pred":"source","obj":"test2"}]},{"project":"GO-BP","denotations":[{"id":"T73","span":{"begin":27,"end":40},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T11409","span":{"begin":27,"end":40},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"attributes":[{"subj":"T73","pred":"source","obj":"GO-BP"},{"subj":"T11409","pred":"source","obj":"GO-BP"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T318","span":{"begin":0,"end":3},"obj":"CD"},{"id":"T319","span":{"begin":4,"end":7},"obj":"CC"},{"id":"T320","span":{"begin":8,"end":11},"obj":"JJ"},{"id":"T321","span":{"begin":12,"end":20},"obj":"VB"},{"id":"T322","span":{"begin":21,"end":26},"obj":"JJ"},{"id":"T323","span":{"begin":27,"end":40},"obj":"NN"},{"id":"T324","span":{"begin":41,"end":43},"obj":"IN"},{"id":"T325","span":{"begin":44,"end":47},"obj":"DT"},{"id":"T326","span":{"begin":48,"end":53},"obj":"JJ"},{"id":"T327","span":{"begin":54,"end":62},"obj":"NNP"},{"id":"T328","span":{"begin":63,"end":67},"obj":"NN"},{"id":"T329","span":{"begin":79,"end":87},"obj":"NNP"},{"id":"T330","span":{"begin":88,"end":89},"obj":"-LRB-"},{"id":"T331","span":{"begin":89,"end":92},"obj":"NNP"},{"id":"T332","span":{"begin":92,"end":93},"obj":"-RRB-"},{"id":"T333","span":{"begin":93,"end":94},"obj":","},{"id":"T334","span":{"begin":95,"end":96},"obj":"DT"},{"id":"T335","span":{"begin":97,"end":103},"obj":"NN"},{"id":"T336","span":{"begin":104,"end":106},"obj":"IN"},{"id":"T337","span":{"begin":107,"end":110},"obj":"DT"},{"id":"T338","span":{"begin":111,"end":119},"obj":"RB"},{"id":"T339","span":{"begin":120,"end":130},"obj":"VBN"},{"id":"T11941","span":{"begin":0,"end":3},"obj":"CD"},{"id":"T11942","span":{"begin":4,"end":7},"obj":"CC"},{"id":"T11943","span":{"begin":8,"end":11},"obj":"JJ"},{"id":"T11944","span":{"begin":27,"end":40},"obj":"NN"}],"relations":[{"id":"R267","pred":"cc","subj":"T319","obj":"T318"},{"id":"R268","pred":"nsubj","subj":"T320","obj":"T321"},{"id":"R269","pred":"conj","subj":"T321","obj":"T318"},{"id":"R270","pred":"amod","subj":"T322","obj":"T323"},{"id":"R271","pred":"dobj","subj":"T323","obj":"T321"},{"id":"R272","pred":"prep","subj":"T324","obj":"T323"},{"id":"R273","pred":"det","subj":"T325","obj":"T328"},{"id":"R274","pred":"amod","subj":"T326","obj":"T328"},{"id":"R275","pred":"compound","subj":"T327","obj":"T328"},{"id":"R276","pred":"pobj","subj":"T328","obj":"T324"},{"id":"R277","pred":"appos","subj":"T329","obj":"T328"},{"id":"R278","pred":"punct","subj":"T330","obj":"T331"},{"id":"R279","pred":"appos","subj":"T331","obj":"T329"},{"id":"R280","pred":"punct","subj":"T332","obj":"T329"},{"id":"R281","pred":"punct","subj":"T333","obj":"T328"},{"id":"R282","pred":"det","subj":"T334","obj":"T335"},{"id":"R283","pred":"appos","subj":"T335","obj":"T328"},{"id":"R284","pred":"prep","subj":"T336","obj":"T335"},{"id":"R286","pred":"advmod","subj":"T338","obj":"T339"},{"id":"R9721","pred":"cc","subj":"T11942","obj":"T11941"}],"attributes":[{"subj":"T318","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T319","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T320","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T321","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T322","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T323","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T324","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T325","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T326","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T327","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T328","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T329","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T330","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T331","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T332","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T333","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T334","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T335","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T336","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T337","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T338","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T339","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T11941","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T11942","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T11943","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T11944","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"sentences","denotations":[{"id":"T64","span":{"begin":0,"end":67},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":67},"obj":"Sentence"},{"id":"T2","span":{"begin":70,"end":78},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T64","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T76","span":{"begin":0,"end":3},"obj":"NN"},{"id":"T77","span":{"begin":4,"end":7},"obj":"CC"},{"id":"T78","span":{"begin":8,"end":11},"obj":"NN"},{"id":"T79","span":{"begin":12,"end":20},"obj":"VB"},{"id":"T80","span":{"begin":21,"end":26},"obj":"JJ"},{"id":"T81","span":{"begin":27,"end":40},"obj":"NN"},{"id":"T82","span":{"begin":41,"end":43},"obj":"IN"},{"id":"T83","span":{"begin":44,"end":47},"obj":"DT"},{"id":"T84","span":{"begin":48,"end":53},"obj":"JJ"},{"id":"T85","span":{"begin":54,"end":62},"obj":"NN"},{"id":"T86","span":{"begin":63,"end":67},"obj":"NN"},{"id":"T87","span":{"begin":79,"end":87},"obj":"NN"},{"id":"T88","span":{"begin":88,"end":89},"obj":"-LRB-"},{"id":"T89","span":{"begin":89,"end":92},"obj":"NN"},{"id":"T90","span":{"begin":92,"end":93},"obj":"-RRB-"},{"id":"T91","span":{"begin":93,"end":94},"obj":"-COMMA-"},{"id":"T92","span":{"begin":95,"end":96},"obj":"DT"},{"id":"T93","span":{"begin":97,"end":103},"obj":"NN"},{"id":"T94","span":{"begin":104,"end":106},"obj":"IN"},{"id":"T95","span":{"begin":107,"end":110},"obj":"DT"},{"id":"T96","span":{"begin":111,"end":119},"obj":"RB"},{"id":"T97","span":{"begin":120,"end":130},"obj":"VB"},{"id":"T11426","span":{"begin":0,"end":3},"obj":"NN"},{"id":"T11427","span":{"begin":4,"end":7},"obj":"CC"},{"id":"T11428","span":{"begin":8,"end":11},"obj":"NN"},{"id":"T11429","span":{"begin":27,"end":40},"obj":"NN"}],"relations":[{"id":"R42","pred":"arg1Of","subj":"T76","obj":"T77"},{"id":"R43","pred":"arg1Of","subj":"T77","obj":"T79"},{"id":"R44","pred":"arg2Of","subj":"T78","obj":"T77"},{"id":"R45","pred":"arg2Of","subj":"T81","obj":"T79"},{"id":"R46","pred":"arg1Of","subj":"T81","obj":"T80"},{"id":"R47","pred":"arg1Of","subj":"T81","obj":"T82"},{"id":"R48","pred":"arg2Of","subj":"T86","obj":"T82"},{"id":"R49","pred":"arg1Of","subj":"T86","obj":"T83"},{"id":"R50","pred":"arg1Of","subj":"T86","obj":"T84"},{"id":"R51","pred":"arg1Of","subj":"T86","obj":"T85"},{"id":"R52","pred":"arg1Of","subj":"T87","obj":"T88"},{"id":"R53","pred":"arg1Of","subj":"T87","obj":"T91"},{"id":"R61","pred":"arg2Of","subj":"T89","obj":"T88"},{"id":"R62","pred":"arg3Of","subj":"T90","obj":"T88"},{"id":"R63","pred":"arg2Of","subj":"T93","obj":"T91"},{"id":"R64","pred":"arg1Of","subj":"T93","obj":"T92"},{"id":"R65","pred":"arg1Of","subj":"T93","obj":"T94"},{"id":"R66","pred":"arg1Of","subj":"T97","obj":"T96"},{"id":"R9254","pred":"arg1Of","subj":"T11426","obj":"T11427"},{"id":"R9255","pred":"arg2Of","subj":"T11428","obj":"T11427"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T76","pred":"source","obj":"pmc-enju-pas"},{"subj":"T77","pred":"source","obj":"pmc-enju-pas"},{"subj":"T78","pred":"source","obj":"pmc-enju-pas"},{"subj":"T79","pred":"source","obj":"pmc-enju-pas"},{"subj":"T80","pred":"source","obj":"pmc-enju-pas"},{"subj":"T81","pred":"source","obj":"pmc-enju-pas"},{"subj":"T82","pred":"source","obj":"pmc-enju-pas"},{"subj":"T83","pred":"source","obj":"pmc-enju-pas"},{"subj":"T84","pred":"source","obj":"pmc-enju-pas"},{"subj":"T85","pred":"source","obj":"pmc-enju-pas"},{"subj":"T86","pred":"source","obj":"pmc-enju-pas"},{"subj":"T87","pred":"source","obj":"pmc-enju-pas"},{"subj":"T88","pred":"source","obj":"pmc-enju-pas"},{"subj":"T89","pred":"source","obj":"pmc-enju-pas"},{"subj":"T90","pred":"source","obj":"pmc-enju-pas"},{"subj":"T91","pred":"source","obj":"pmc-enju-pas"},{"subj":"T92","pred":"source","obj":"pmc-enju-pas"},{"subj":"T93","pred":"source","obj":"pmc-enju-pas"},{"subj":"T94","pred":"source","obj":"pmc-enju-pas"},{"subj":"T95","pred":"source","obj":"pmc-enju-pas"},{"subj":"T96","pred":"source","obj":"pmc-enju-pas"},{"subj":"T97","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11426","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11427","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11428","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11429","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T294","span":{"begin":79,"end":87},"obj":"Antecedent"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T294","pred":"source","obj":"bionlp-st-ge-2016-coref"}]},{"project":"events-check-again","denotations":[{"id":"T657","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T658","span":{"begin":8,"end":11},"obj":"Protein"},{"id":"T659","span":{"begin":12,"end":20},"obj":"Regulation"},{"id":"T660","span":{"begin":12,"end":20},"obj":"Regulation"},{"id":"T661","span":{"begin":27,"end":40},"obj":"Transcription"},{"id":"T662","span":{"begin":54,"end":62},"obj":"Protein"},{"id":"T663","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T664","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T12702","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T12703","span":{"begin":8,"end":11},"obj":"Protein"}],"relations":[{"id":"R545","pred":"causeOf","subj":"T657","obj":"T660"},{"id":"R546","pred":"causeOf","subj":"T658","obj":"T659"},{"id":"R547","pred":"themeOf","subj":"T661","obj":"T660"},{"id":"R548","pred":"themeOf","subj":"T661","obj":"T659"},{"id":"R549","pred":"themeOf","subj":"T662","obj":"T661"},{"id":"R552","pred":"equivalentTo","subj":"T664","obj":"T663"}],"attributes":[{"subj":"T657","pred":"source","obj":"events-check-again"},{"subj":"T658","pred":"source","obj":"events-check-again"},{"subj":"T659","pred":"source","obj":"events-check-again"},{"subj":"T660","pred":"source","obj":"events-check-again"},{"subj":"T661","pred":"source","obj":"events-check-again"},{"subj":"T662","pred":"source","obj":"events-check-again"},{"subj":"T663","pred":"source","obj":"events-check-again"},{"subj":"T664","pred":"source","obj":"events-check-again"},{"subj":"T12702","pred":"source","obj":"events-check-again"},{"subj":"T12703","pred":"source","obj":"events-check-again"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T678","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T679","span":{"begin":8,"end":11},"obj":"Protein"},{"id":"T680","span":{"begin":48,"end":67},"obj":"Protein"},{"id":"T681","span":{"begin":27,"end":40},"obj":"Transcription"},{"id":"T682","span":{"begin":12,"end":20},"obj":"Regulation"},{"id":"T683","span":{"begin":12,"end":20},"obj":"Regulation"},{"id":"T684","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T685","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T12745","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T12746","span":{"begin":8,"end":11},"obj":"Protein"}],"relations":[{"id":"R560","pred":"causeOf","subj":"T678","obj":"T682"},{"id":"R561","pred":"causeOf","subj":"T679","obj":"T683"},{"id":"R562","pred":"themeOf","subj":"T680","obj":"T681"},{"id":"R563","pred":"themeOf","subj":"T681","obj":"T682"},{"id":"R564","pred":"themeOf","subj":"T681","obj":"T683"}],"attributes":[{"subj":"T678","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T679","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T680","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T681","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T682","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T683","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T684","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T685","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T12745","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T12746","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T43","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T44","span":{"begin":8,"end":11},"obj":"Protein"},{"id":"T45","span":{"begin":12,"end":20},"obj":"Regulation"},{"id":"T46","span":{"begin":12,"end":20},"obj":"Regulation"},{"id":"T47","span":{"begin":27,"end":40},"obj":"Transcription"},{"id":"T48","span":{"begin":54,"end":62},"obj":"Protein"},{"id":"T49","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T50","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T11349","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T11350","span":{"begin":8,"end":11},"obj":"Protein"}],"relations":[{"id":"R27","pred":"causeOf","subj":"T43","obj":"T46"},{"id":"R28","pred":"causeOf","subj":"T44","obj":"T45"},{"id":"R29","pred":"themeOf","subj":"T47","obj":"T46"},{"id":"R30","pred":"themeOf","subj":"T47","obj":"T45"},{"id":"R31","pred":"themeOf","subj":"T48","obj":"T47"},{"id":"R34","pred":"equivalentTo","subj":"T50","obj":"T49"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T43","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T44","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T45","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T46","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T47","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T48","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T49","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T50","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T11349","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T11350","pred":"source","obj":"bionlp-st-ge-2016-reference"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T11889","span":{"begin":0,"end":3},"obj":"P08047"},{"id":"T11890","span":{"begin":8,"end":11},"obj":"Q02447"},{"id":"T295","span":{"begin":0,"end":3},"obj":"P08047"},{"id":"T296","span":{"begin":8,"end":11},"obj":"Q02447"},{"id":"T297","span":{"begin":54,"end":62},"obj":"Q9HC16"},{"id":"T298","span":{"begin":79,"end":87},"obj":"Q9HC16"},{"id":"T299","span":{"begin":89,"end":92},"obj":"Q9HC16"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T11889","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T11890","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T295","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T296","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T297","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T298","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T299","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"test2","color":"#e2ec93","default":true},{"id":"GO-BP","color":"#dc93ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#93ecc2"},{"id":"sentences","color":"#eca893"},{"id":"pmc-enju-pas","color":"#9398ec"},{"id":"bionlp-st-ge-2016-coref","color":"#b2ec93"},{"id":"events-check-again","color":"#ec93cc"},{"id":"bionlp-st-ge-2016-reference-tees","color":"#93e6ec"},{"id":"bionlp-st-ge-2016-reference","color":"#ecd893"},{"id":"bionlp-st-ge-2016-uniprot","color":"#be93ec"}]}]}}