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PMC:1914394 / 31088-31512 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T16711 0-2 PRP denotes We
T16712 3-13 VBD denotes quantified
T16713 14-17 DT denotes the
T16714 18-26 NN denotes fraction
T16715 27-29 IN denotes of
T16716 30-36 NN denotes Camk2a
T16717 38-42 NNS denotes SACs
T16718 36-37 SYM denotes +
T16719 43-45 IN denotes in
T16720 46-55 JJ denotes different
T16721 56-65 NNS denotes genotypes
T16722 66-69 CC denotes and
T16723 70-75 VBD denotes found
T16724 76-80 IN denotes that
T16725 109-118 VBD denotes expressed
T16726 81-83 CD denotes 60
T16727 83-84 NN denotes %
T16728 85-87 IN denotes of
T16729 88-90 NN denotes WT
T16730 103-108 NNS denotes cells
T16731 91-94 NN denotes P30
T16732 95-101 NN denotes Camk2a
T16733 101-102 SYM denotes +
T16734 119-123 NN denotes Chat
T16735 124-127 CC denotes and
T16736 128-135 NN denotes Slc18a3
T16737 135-137 , denotes ,
T16738 137-142 WDT denotes which
T16739 143-150 VBD denotes dropped
T16740 151-153 IN denotes to
T16741 154-158 RB denotes only
T16742 159-162 CD denotes 5.6
T16743 162-163 NN denotes %
T16744 164-166 IN denotes in
T16745 167-170 DT denotes the
T16746 177-183 NN denotes retina
T16747 171-173 NN denotes Rb
T16748 174-176 NN denotes KO
T16749 183-185 , denotes ,
T16750 185-188 CC denotes and
T16751 189-197 VBD denotes remained
T16752 198-201 JJ denotes low
T16753 202-204 IN denotes at
T16754 205-208 CD denotes 3.7
T16755 208-209 NN denotes %
T16756 210-212 IN denotes in
T16757 213-216 DT denotes the
T16758 229-235 NN denotes retina
T16759 217-219 NN denotes Rb
T16760 220-224 NN denotes E2f1
T16761 219-220 HYPH denotes /
T16762 225-228 NN denotes DKO
T16763 235-237 , denotes ,
T16764 237-240 CC denotes but
T16765 241-245 VBD denotes rose
T16766 246-248 IN denotes to
T16767 249-251 CD denotes 91
T16768 251-252 NN denotes %
T16769 253-255 IN denotes in
T16770 256-259 DT denotes the
T16771 272-278 NN denotes retina
T16772 260-262 NN denotes Rb
T16773 263-267 NN denotes E2f3
T16774 262-263 HYPH denotes /
T16775 268-271 NN denotes DKO
T16776 279-280 -LRB- denotes (
T16777 287-289 NN denotes 4B
T16778 280-286 NN denotes Figure
T16779 289-290 -RRB- denotes )
T16780 290-291 . denotes .
T16781 291-424 sentence denotes The latter fraction is higher than WT because ganglion cells, which normally make up ~40% of Camk2a+ cells, are killed by apoptosis.
T16782 292-295 DT denotes The
T16783 303-311 NN denotes fraction
T16784 296-302 JJ denotes latter
T16785 312-314 VBZ denotes is
T16786 315-321 JJR denotes higher
T16787 322-326 IN denotes than
T16788 327-329 NN denotes WT
T16789 330-337 IN denotes because
T16790 404-410 VBN denotes killed
T16791 338-346 NN denotes ganglion
T16792 347-352 NNS denotes cells
T16793 352-354 , denotes ,
T16794 354-359 WDT denotes which
T16795 369-373 VBP denotes make
T16796 360-368 RB denotes normally
T16797 374-376 RP denotes up
T16798 377-378 SYM denotes ~
T16799 378-380 CD denotes 40
T16800 380-381 NN denotes %
T16801 382-384 IN denotes of
T16802 385-391 NN denotes Camk2a
T16803 393-398 NNS denotes cells
T16804 391-392 SYM denotes +
T16805 398-400 , denotes ,
T16806 400-403 VBP denotes are
T16807 411-413 IN denotes by
T16808 414-423 NN denotes apoptosis
T16809 423-424 . denotes .
R4752 T16711 T16712 nsubj We,quantified
R4753 T16713 T16714 det the,fraction
R4754 T16714 T16712 dobj fraction,quantified
R4755 T16715 T16714 prep of,fraction
R4756 T16716 T16717 nmod Camk2a,SACs
R4757 T16717 T16715 pobj SACs,of
R4758 T16718 T16716 punct +,Camk2a
R4759 T16719 T16714 prep in,fraction
R4760 T16720 T16721 amod different,genotypes
R4761 T16721 T16719 pobj genotypes,in
R4762 T16722 T16712 cc and,quantified
R4763 T16723 T16712 conj found,quantified
R4764 T16724 T16725 mark that,expressed
R4765 T16725 T16723 ccomp expressed,found
R4766 T16726 T16727 nummod 60,%
R4767 T16727 T16725 nsubj %,expressed
R4768 T16728 T16727 prep of,%
R4769 T16729 T16730 nmod WT,cells
R4770 T16730 T16728 pobj cells,of
R4771 T16731 T16730 nmod P30,cells
R4772 T16732 T16730 nmod Camk2a,cells
R4773 T16733 T16732 punct +,Camk2a
R4774 T16734 T16725 dobj Chat,expressed
R4775 T16735 T16734 cc and,Chat
R4776 T16736 T16734 conj Slc18a3,Chat
R4777 T16737 T16725 punct ", ",expressed
R4778 T16738 T16739 dep which,dropped
R4779 T16739 T16725 ccomp dropped,expressed
R4780 T16740 T16739 prep to,dropped
R4781 T16741 T16742 advmod only,5.6
R4782 T16742 T16743 nummod 5.6,%
R4783 T16743 T16740 pobj %,to
R4784 T16744 T16739 prep in,dropped
R4785 T16745 T16746 det the,retina
R4786 T16746 T16744 pobj retina,in
R4787 T16747 T16748 compound Rb,KO
R4788 T16748 T16746 compound KO,retina
R4789 T16749 T16739 punct ", ",dropped
R4790 T16750 T16739 cc and,dropped
R4791 T16751 T16739 conj remained,dropped
R4792 T16752 T16751 acomp low,remained
R4793 T16753 T16751 prep at,remained
R4794 T16754 T16755 nummod 3.7,%
R4795 T16755 T16753 pobj %,at
R4796 T16756 T16751 prep in,remained
R4797 T16757 T16758 det the,retina
R4798 T16758 T16756 pobj retina,in
R4799 T16759 T16760 compound Rb,E2f1
R4800 T16760 T16762 compound E2f1,DKO
R4801 T16761 T16760 punct /,E2f1
R4802 T16762 T16758 compound DKO,retina
R4803 T16763 T16751 punct ", ",remained
R4804 T16764 T16751 cc but,remained
R4805 T16765 T16751 conj rose,remained
R4806 T16766 T16765 prep to,rose
R4807 T16767 T16768 nummod 91,%
R4808 T16768 T16766 pobj %,to
R4809 T16769 T16765 prep in,rose
R4810 T16770 T16771 det the,retina
R4811 T16771 T16769 pobj retina,in
R4812 T16772 T16773 compound Rb,E2f3
R4813 T16773 T16775 compound E2f3,DKO
R4814 T16774 T16773 punct /,E2f3
R4815 T16775 T16771 compound DKO,retina
R4816 T16776 T16777 punct (,4B
R4817 T16777 T16765 parataxis 4B,rose
R4818 T16778 T16777 compound Figure,4B
R4819 T16779 T16777 punct ),4B
R4820 T16780 T16712 punct .,quantified
R4821 T16782 T16783 det The,fraction
R4822 T16783 T16785 nsubj fraction,is
R4823 T16784 T16783 amod latter,fraction
R4824 T16786 T16785 acomp higher,is
R4825 T16787 T16786 prep than,higher
R4826 T16788 T16787 pobj WT,than
R4827 T16789 T16790 mark because,killed
R4828 T16790 T16785 advcl killed,is
R4829 T16791 T16792 compound ganglion,cells
R4830 T16792 T16790 nsubjpass cells,killed
R4831 T16793 T16792 punct ", ",cells
R4832 T16794 T16795 dep which,make
R4833 T16795 T16792 relcl make,cells
R4834 T16796 T16795 advmod normally,make
R4835 T16797 T16795 prt up,make
R4836 T16798 T16799 punct ~,40
R4837 T16799 T16800 nummod 40,%
R4838 T16800 T16795 dobj %,make
R4839 T16801 T16800 prep of,%
R4840 T16802 T16803 nmod Camk2a,cells
R4841 T16803 T16801 pobj cells,of
R4842 T16804 T16802 punct +,Camk2a
R4843 T16805 T16790 punct ", ",killed
R4844 T16806 T16790 auxpass are,killed
R4845 T16807 T16790 agent by,killed
R4846 T16808 T16807 pobj apoptosis,by
R4847 T16809 T16785 punct .,is

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T16308 30-36 PR_EXT:000003199 denotes Camk2a
T16309 56-65 SO_EXT:genotype_or_entity_with_genotype denotes genotypes
T16310 88-90 SO_EXT:wild_type_entity_or_quality denotes WT
T16311 95-101 PR_EXT:000003199 denotes Camk2a
T16312 103-108 CL_GO_EXT:cell denotes cells
T16313 109-118 GO:0010467 denotes expressed
T16314 119-123 GO_PR_EXT:choline_O_acetyltransferase denotes Chat
T16315 128-135 PR_EXT:000014968 denotes Slc18a3
T16316 171-173 PR_EXT:000013773 denotes Rb
T16317 177-183 UBERON:0000966 denotes retina
T16318 217-219 PR_EXT:000013773 denotes Rb
T16319 220-224 PR_EXT:000006852 denotes E2f1
T16320 229-235 UBERON:0000966 denotes retina
T16321 260-262 PR_EXT:000013773 denotes Rb
T16322 263-267 PR_EXT:000006854 denotes E2f3
T16323 272-278 UBERON:0000966 denotes retina
T16324 327-329 SO_EXT:wild_type_entity_or_quality denotes WT
T16325 338-346 UBERON:0000045 denotes ganglion
T16326 338-352 CL:0000740 denotes ganglion cells
T16327 347-352 CL_GO_EXT:cell denotes cells
T16328 385-391 PR_EXT:000003199 denotes Camk2a
T16329 393-398 CL_GO_EXT:cell denotes cells
T16330 404-410 GO_EXT:killing denotes killed
T16331 414-423 GO:0006915 denotes apoptosis

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T16169 30-36 PR:000003199 denotes Camk2a
T16170 95-101 PR:000003199 denotes Camk2a
T16171 109-118 GO:0010467 denotes expressed
T16172 128-135 PR:000014968 denotes Slc18a3
T16173 171-173 PR:000013773 denotes Rb
T16174 177-183 UBERON:0000966 denotes retina
T16175 217-219 PR:000013773 denotes Rb
T16176 220-224 PR:000006852 denotes E2f1
T16177 229-235 UBERON:0000966 denotes retina
T16178 260-262 PR:000013773 denotes Rb
T16179 263-267 PR:000006854 denotes E2f3
T16180 272-278 UBERON:0000966 denotes retina
T16181 338-346 UBERON:0000045 denotes ganglion
T16182 338-352 CL:0000740 denotes ganglion cells
T16183 385-391 PR:000003199 denotes Camk2a
T16184 414-423 GO:0006915 denotes apoptosis