> top > docs > PMC:1914394 > spans > 19723-20524 > annotations

PMC:1914394 / 19723-20524 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T11039 0-3 DT denotes The
T11040 4-13 NN denotes discovery
T11041 74-76 VBZ denotes is
T11042 14-18 IN denotes that
T11043 29-36 VBZ denotes rescues
T11044 19-23 NN denotes E2f1
T11045 24-28 NN denotes loss
T11046 37-41 RB denotes even
T11047 46-56 NN denotes morphology
T11048 42-45 DT denotes the
T11049 57-59 IN denotes of
T11050 60-62 NN denotes Rb
T11051 63-65 NN denotes KO
T11052 66-73 NNS denotes neurons
T11053 77-87 JJ denotes surprising
T11054 88-95 IN denotes because
T11055 102-109 VBN denotes thought
T11056 96-98 NN denotes Rb
T11057 99-101 VBZ denotes is
T11058 110-112 TO denotes to
T11059 113-121 VB denotes regulate
T11060 122-137 NN denotes differentiation
T11061 138-147 RB denotes primarily
T11062 148-155 IN denotes through
T11063 156-159 NN denotes E2f
T11064 160-171 JJ denotes independent
T11065 159-160 HYPH denotes -
T11066 172-180 NNS denotes pathways
T11067 181-182 -LRB- denotes [
T11068 182-184 CD denotes 30
T11069 184-185 SYM denotes –
T11070 185-187 CD denotes 33
T11071 187-188 -RRB- denotes ]
T11072 188-189 . denotes .
T11073 189-269 sentence denotes However, normal morphology may not equate to completely normal differentiation.
T11074 190-197 RB denotes However
T11075 225-231 VB denotes equate
T11076 197-199 , denotes ,
T11077 199-205 JJ denotes normal
T11078 206-216 NN denotes morphology
T11079 217-220 MD denotes may
T11080 221-224 RB denotes not
T11081 232-234 IN denotes to
T11082 235-245 RB denotes completely
T11083 246-252 JJ denotes normal
T11084 253-268 NN denotes differentiation
T11085 268-269 . denotes .
T11086 269-402 sentence denotes Thus, we compared the electroretinograms (ERGs) of adult WT (α-Cre), E2f1−/−, α-Cre;RbloxP/loxP, and α-Cre;RbloxP/loxP;E2f1−/− mice.
T11087 270-274 RB denotes Thus
T11088 279-287 VBD denotes compared
T11089 274-276 , denotes ,
T11090 276-278 PRP denotes we
T11091 288-291 DT denotes the
T11092 292-310 NNS denotes electroretinograms
T11093 311-312 -LRB- denotes (
T11094 312-316 NNS denotes ERGs
T11095 316-317 -RRB- denotes )
T11096 318-320 IN denotes of
T11097 321-326 JJ denotes adult
T11098 397-401 NNS denotes mice
T11099 327-329 NN denotes WT
T11100 330-331 -LRB- denotes (
T11101 331-332 NN denotes α
T11102 333-336 NN denotes Cre
T11103 332-333 HYPH denotes -
T11104 336-337 -RRB- denotes )
T11105 337-339 , denotes ,
T11106 339-343 NN denotes E2f1
T11107 343-344 SYM denotes −
T11108 344-345 HYPH denotes /
T11109 345-346 SYM denotes −
T11110 346-348 , denotes ,
T11111 348-349 NN denotes α
T11112 350-353 NN denotes Cre
T11113 349-350 HYPH denotes -
T11114 353-354 : denotes ;
T11115 354-360 NN denotes RbloxP
T11116 361-365 NN denotes loxP
T11117 360-361 HYPH denotes /
T11118 365-367 , denotes ,
T11119 367-370 CC denotes and
T11120 371-372 NN denotes α
T11121 373-376 NN denotes Cre
T11122 372-373 HYPH denotes -
T11123 376-377 : denotes ;
T11124 377-383 NN denotes RbloxP
T11125 384-388 NN denotes loxP
T11126 383-384 HYPH denotes /
T11127 388-389 : denotes ;
T11128 389-393 NN denotes E2f1
T11129 393-394 SYM denotes −
T11130 394-395 HYPH denotes /
T11131 395-396 SYM denotes −
T11132 401-402 . denotes .
T11133 402-589 sentence denotes ERGs functionally assess visual signalling in the mammalian retina from photoreceptors to amacrine cells (but usually not gangion cells), and are dominated by rod and cone bipolar cells.
T11134 403-407 NNS denotes ERGs
T11135 421-427 VBP denotes assess
T11136 408-420 RB denotes functionally
T11137 428-434 JJ denotes visual
T11138 435-445 NN denotes signalling
T11139 446-448 IN denotes in
T11140 449-452 DT denotes the
T11141 463-469 NN denotes retina
T11142 453-462 JJ denotes mammalian
T11143 470-474 IN denotes from
T11144 475-489 NNS denotes photoreceptors
T11145 490-492 IN denotes to
T11146 493-501 JJ denotes amacrine
T11147 502-507 NNS denotes cells
T11148 508-509 -LRB- denotes (
T11149 509-512 CC denotes but
T11150 513-520 RB denotes usually
T11151 521-524 RB denotes not
T11152 533-538 NNS denotes cells
T11153 525-532 NN denotes gangion
T11154 538-539 -RRB- denotes )
T11155 539-541 , denotes ,
T11156 541-544 CC denotes and
T11157 545-548 VBP denotes are
T11158 549-558 VBN denotes dominated
T11159 559-561 IN denotes by
T11160 562-565 NN denotes rod
T11161 583-588 NNS denotes cells
T11162 566-569 CC denotes and
T11163 570-574 NN denotes cone
T11164 575-582 JJ denotes bipolar
T11165 588-589 . denotes .
T11166 589-801 sentence denotes Typically, an ERG signal begins with a negative deflection initiated by the photoreceptors (the a-wave), which is terminated by a large positive deflection due to the activation of ON bipolar cells (the b-wave).
T11167 590-599 RB denotes Typically
T11168 615-621 VBZ denotes begins
T11169 599-601 , denotes ,
T11170 601-603 DT denotes an
T11171 608-614 NN denotes signal
T11172 604-607 NN denotes ERG
T11173 622-626 IN denotes with
T11174 627-628 DT denotes a
T11175 638-648 NN denotes deflection
T11176 629-637 JJ denotes negative
T11177 649-658 VBN denotes initiated
T11178 659-661 IN denotes by
T11179 662-665 DT denotes the
T11180 666-680 NNS denotes photoreceptors
T11181 681-682 -LRB- denotes (
T11182 682-685 DT denotes the
T11183 688-692 NN denotes wave
T11184 686-687 NN denotes a
T11185 687-688 HYPH denotes -
T11186 692-693 -RRB- denotes )
T11187 693-695 , denotes ,
T11188 695-700 WDT denotes which
T11189 704-714 VBN denotes terminated
T11190 701-703 VBZ denotes is
T11191 715-717 IN denotes by
T11192 718-719 DT denotes a
T11193 735-745 NN denotes deflection
T11194 720-725 JJ denotes large
T11195 726-734 JJ denotes positive
T11196 746-749 IN denotes due
T11197 750-752 IN denotes to
T11198 753-756 DT denotes the
T11199 757-767 NN denotes activation
T11200 768-770 IN denotes of
T11201 771-773 NN denotes ON
T11202 782-787 NNS denotes cells
T11203 774-781 JJ denotes bipolar
T11204 788-789 -LRB- denotes (
T11205 789-792 DT denotes the
T11206 795-799 NN denotes wave
T11207 793-794 NN denotes b
T11208 794-795 HYPH denotes -
T11209 799-800 -RRB- denotes )
T11210 800-801 . denotes .
R2945 T11039 T11040 det The,discovery
R2946 T11040 T11041 nsubj discovery,is
R2947 T11042 T11043 mark that,rescues
R2948 T11043 T11040 acl rescues,discovery
R2949 T11044 T11045 compound E2f1,loss
R2950 T11045 T11043 nsubj loss,rescues
R2951 T11046 T11047 advmod even,morphology
R2952 T11047 T11043 dobj morphology,rescues
R2953 T11048 T11047 det the,morphology
R2954 T11049 T11047 prep of,morphology
R2955 T11050 T11051 compound Rb,KO
R2956 T11051 T11052 compound KO,neurons
R2957 T11052 T11049 pobj neurons,of
R2958 T11053 T11041 acomp surprising,is
R2959 T11054 T11055 mark because,thought
R2960 T11055 T11041 advcl thought,is
R2961 T11056 T11055 nsubjpass Rb,thought
R2962 T11057 T11055 auxpass is,thought
R2963 T11058 T11059 aux to,regulate
R2964 T11059 T11055 xcomp regulate,thought
R2965 T11060 T11059 dobj differentiation,regulate
R2966 T11061 T11062 advmod primarily,through
R2967 T11062 T11059 prep through,regulate
R2968 T11063 T11064 npadvmod E2f,independent
R2969 T11064 T11066 amod independent,pathways
R2970 T11065 T11064 punct -,independent
R2971 T11066 T11062 pobj pathways,through
R2972 T11067 T11068 punct [,30
R2973 T11068 T11041 parataxis 30,is
R2974 T11069 T11070 punct –,33
R2975 T11070 T11068 prep 33,30
R2976 T11071 T11068 punct ],30
R2977 T11072 T11041 punct .,is
R2978 T11074 T11075 advmod However,equate
R2979 T11076 T11075 punct ", ",equate
R2980 T11077 T11078 amod normal,morphology
R2981 T11078 T11075 nsubj morphology,equate
R2982 T11079 T11075 aux may,equate
R2983 T11080 T11075 neg not,equate
R2984 T11081 T11075 prep to,equate
R2985 T11082 T11083 advmod completely,normal
R2986 T11083 T11084 amod normal,differentiation
R2987 T11084 T11081 pobj differentiation,to
R2988 T11085 T11075 punct .,equate
R2989 T11087 T11088 advmod Thus,compared
R2990 T11089 T11088 punct ", ",compared
R2991 T11090 T11088 nsubj we,compared
R2992 T11091 T11092 det the,electroretinograms
R2993 T11092 T11088 dobj electroretinograms,compared
R2994 T11093 T11092 punct (,electroretinograms
R2995 T11094 T11092 appos ERGs,electroretinograms
R2996 T11095 T11092 punct ),electroretinograms
R2997 T11096 T11092 prep of,electroretinograms
R2998 T11097 T11098 amod adult,mice
R2999 T11098 T11096 pobj mice,of
R3000 T11099 T11098 nmod WT,mice
R3001 T11100 T11099 punct (,WT
R3002 T11101 T11102 compound α,Cre
R3003 T11102 T11099 appos Cre,WT
R3004 T11103 T11102 punct -,Cre
R3005 T11104 T11099 punct ),WT
R3006 T11105 T11099 punct ", ",WT
R3007 T11106 T11099 conj E2f1,WT
R3008 T11107 T11106 punct −,E2f1
R3009 T11108 T11106 punct /,E2f1
R3010 T11109 T11106 punct −,E2f1
R3011 T11110 T11106 punct ", ",E2f1
R3012 T11111 T11112 compound α,Cre
R3013 T11112 T11106 conj Cre,E2f1
R3014 T11113 T11112 punct -,Cre
R3015 T11114 T11112 punct ;,Cre
R3016 T11115 T11116 compound RbloxP,loxP
R3017 T11116 T11112 appos loxP,Cre
R3018 T11117 T11116 punct /,loxP
R3019 T11118 T11112 punct ", ",Cre
R3020 T11119 T11112 cc and,Cre
R3021 T11120 T11121 compound α,Cre
R3022 T11121 T11112 conj Cre,Cre
R3023 T11122 T11121 punct -,Cre
R3024 T11123 T11121 punct ;,Cre
R3025 T11124 T11125 compound RbloxP,loxP
R3026 T11125 T11121 appos loxP,Cre
R3027 T11126 T11125 punct /,loxP
R3028 T11127 T11121 punct ;,Cre
R3029 T11128 T11121 appos E2f1,Cre
R3030 T11129 T11128 punct −,E2f1
R3031 T11130 T11128 punct /,E2f1
R3032 T11131 T11128 punct −,E2f1
R3033 T11132 T11088 punct .,compared
R3034 T11134 T11135 nsubj ERGs,assess
R3035 T11136 T11135 advmod functionally,assess
R3036 T11137 T11138 amod visual,signalling
R3037 T11138 T11135 dobj signalling,assess
R3038 T11139 T11138 prep in,signalling
R3039 T11140 T11141 det the,retina
R3040 T11141 T11139 pobj retina,in
R3041 T11142 T11141 amod mammalian,retina
R3042 T11143 T11138 prep from,signalling
R3043 T11144 T11143 pobj photoreceptors,from
R3044 T11145 T11143 prep to,from
R3045 T11146 T11147 amod amacrine,cells
R3046 T11147 T11145 pobj cells,to
R3047 T11148 T11147 punct (,cells
R3048 T11149 T11147 cc but,cells
R3049 T11150 T11151 advmod usually,not
R3050 T11151 T11152 neg not,cells
R3051 T11152 T11147 conj cells,cells
R3052 T11153 T11152 compound gangion,cells
R3053 T11154 T11135 punct ),assess
R3054 T11155 T11135 punct ", ",assess
R3055 T11156 T11135 cc and,assess
R3056 T11157 T11158 auxpass are,dominated
R3057 T11158 T11135 conj dominated,assess
R3058 T11159 T11158 agent by,dominated
R3059 T11160 T11161 nmod rod,cells
R3060 T11161 T11159 pobj cells,by
R3061 T11162 T11160 cc and,rod
R3062 T11163 T11160 conj cone,rod
R3063 T11164 T11161 amod bipolar,cells
R3064 T11165 T11135 punct .,assess
R3065 T11167 T11168 advmod Typically,begins
R3066 T11169 T11168 punct ", ",begins
R3067 T11170 T11171 det an,signal
R3068 T11171 T11168 nsubj signal,begins
R3069 T11172 T11171 compound ERG,signal
R3070 T11173 T11168 prep with,begins
R3071 T11174 T11175 det a,deflection
R3072 T11175 T11173 pobj deflection,with
R3073 T11176 T11175 amod negative,deflection
R3074 T11177 T11175 acl initiated,deflection
R3075 T11178 T11177 agent by,initiated
R3076 T11179 T11180 det the,photoreceptors
R3077 T11180 T11178 pobj photoreceptors,by
R3078 T11181 T11175 punct (,deflection
R3079 T11182 T11183 det the,wave
R3080 T11183 T11175 appos wave,deflection
R3081 T11184 T11183 compound a,wave
R3082 T11185 T11183 punct -,wave
R3083 T11186 T11175 punct ),deflection
R3084 T11187 T11175 punct ", ",deflection
R3085 T11188 T11189 dep which,terminated
R3086 T11189 T11175 relcl terminated,deflection
R3087 T11190 T11189 auxpass is,terminated
R3088 T11191 T11189 agent by,terminated
R3089 T11192 T11193 det a,deflection
R3090 T11193 T11191 pobj deflection,by
R3091 T11194 T11193 amod large,deflection
R3092 T11195 T11193 amod positive,deflection
R3093 T11196 T11189 prep due,terminated
R3094 T11197 T11196 pcomp to,due
R3095 T11198 T11199 det the,activation
R3096 T11199 T11196 pobj activation,due
R3097 T11200 T11199 prep of,activation
R3098 T11201 T11202 nmod ON,cells
R3099 T11202 T11200 pobj cells,of
R3100 T11203 T11202 amod bipolar,cells
R3101 T11204 T11189 punct (,terminated
R3102 T11205 T11206 det the,wave
R3103 T11206 T11189 dobj wave,terminated
R3104 T11207 T11206 compound b,wave
R3105 T11208 T11206 punct -,wave
R3106 T11209 T11168 punct ),begins
R3107 T11210 T11168 punct .,begins

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T10902 19-23 PR_EXT:000006852 denotes E2f1
T10903 29-36 SO_EXT:sequence_rescue_process denotes rescues
T10904 60-62 PR_EXT:000013773 denotes Rb
T10905 66-73 CL:0000540 denotes neurons
T10906 96-98 PR_EXT:000013773 denotes Rb
T10907 113-121 GO:0065007 denotes regulate
T10908 122-137 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T10909 156-159 PR_EXT:E2F denotes E2f
T10910 253-268 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T10911 321-326 UBERON:0007023 denotes adult
T10912 327-329 SO_EXT:wild_type_entity_or_quality denotes WT
T10913 339-343 PR_EXT:000006852 denotes E2f1
T10914 343-344 SO_EXT:sequence_nullness_or_absence denotes −
T10915 345-346 SO_EXT:sequence_nullness_or_absence denotes −
T10916 354-356 PR_EXT:000013773 denotes Rb
T10917 356-360 SO_EXT:0000346 denotes loxP
T10918 361-365 SO_EXT:0000346 denotes loxP
T10919 377-379 PR_EXT:000013773 denotes Rb
T10920 379-383 SO_EXT:0000346 denotes loxP
T10921 384-388 SO_EXT:0000346 denotes loxP
T10922 389-393 PR_EXT:000006852 denotes E2f1
T10923 393-394 SO_EXT:sequence_nullness_or_absence denotes −
T10924 395-396 SO_EXT:sequence_nullness_or_absence denotes −
T10925 397-401 NCBITaxon:10088 denotes mice
T10926 428-445 GO:0007602 denotes visual signalling
T10927 453-462 NCBITaxon:40674 denotes mammalian
T10928 463-469 UBERON:0000966 denotes retina
T10929 475-489 CL:0000210 denotes photoreceptors
T10930 493-507 CL:0000561 denotes amacrine cells
T10931 502-507 CL_GO_EXT:cell denotes cells
T10932 525-532 UBERON:0000045 denotes gangion
T10933 525-538 CL:0000740 denotes gangion cells
T10934 533-538 CL_GO_EXT:cell denotes cells
T10935 562-565 _FRAGMENT denotes rod
T10936 575-588 CL:0000751 denotes bipolar cells
T10937 570-588 CL:0000752 denotes cone bipolar cells
T10938 583-588 CL_GO_EXT:cell denotes cells
T10939 666-680 CL:0000210 denotes photoreceptors
T10940 757-770 _FRAGMENT denotes activation of
T10941 782-787 GO:0001775 denotes cells
T10942 771-787 CL:0000749 denotes ON bipolar cells
T10943 782-787 CL_GO_EXT:cell denotes cells
R2933 T10936 T10935 _lexicallyChainedTo bipolar cells,rod
R2934 T10941 T10940 _lexicallyChainedTo cells,activation of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T10820 397-401 NCBITaxon:10088 denotes mice
T10821 428-445 GO:0007602 denotes visual signalling
T10822 453-462 NCBITaxon:40674 denotes mammalian
T10823 463-469 UBERON:0000966 denotes retina
T10824 475-489 CL:0000210 denotes photoreceptors
T10825 493-507 CL:0000561 denotes amacrine cells
T10826 525-532 UBERON:0000045 denotes gangion
T10827 525-538 CL:0000740 denotes gangion cells
T10828 562-565 _FRAGMENT denotes rod
T10806 19-23 PR:000006852 denotes E2f1
T10807 60-62 PR:000013773 denotes Rb
T10808 66-73 CL:0000540 denotes neurons
T10809 96-98 PR:000013773 denotes Rb
T10810 113-121 GO:0065007 denotes regulate
T10811 321-326 UBERON:0007023 denotes adult
T10812 339-343 PR:000006852 denotes E2f1
T10813 354-356 PR:000013773 denotes Rb
T10814 356-360 SO:0000346 denotes loxP
T10815 361-365 SO:0000346 denotes loxP
T10816 377-379 PR:000013773 denotes Rb
T10817 379-383 SO:0000346 denotes loxP
T10818 384-388 SO:0000346 denotes loxP
T10819 389-393 PR:000006852 denotes E2f1
T10829 575-588 CL:0000751 denotes bipolar cells
T10830 570-588 CL:0000752 denotes cone bipolar cells
T10831 666-680 CL:0000210 denotes photoreceptors
T10832 757-770 _FRAGMENT denotes activation of
T10833 782-787 GO:0001775 denotes cells
T10834 771-787 CL:0000749 denotes ON bipolar cells
R2929 T10829 T10828 _lexicallyChainedTo bipolar cells,rod
R2930 T10833 T10832 _lexicallyChainedTo cells,activation of

2_test

Id Subject Object Predicate Lexical cue
17608565-9420334-84868979 182-184 9420334 denotes 30
17608565-8381715-84868979 182-184 8381715 denotes 30
17608565-11545733-84868979 182-184 11545733 denotes 30
17608565-8946919-84868979 182-184 8946919 denotes 30
T28719 182-184 9420334 denotes 30
T5228 182-184 8381715 denotes 30
T83773 182-184 11545733 denotes 30
T51839 182-184 8946919 denotes 30