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PMC:1858683 / 34295-34655 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T16127 127-133 NN denotes mutant
T16162 359-360 . denotes .
T16161 358-359 -RRB- denotes ]
T16160 357-358 CD denotes 2
T16159 356-357 -LRB- denotes [
T16158 342-345 NN denotes Wnt
T16157 346-355 NN denotes signaling
T16156 332-341 JJ denotes canonical
T16155 328-331 IN denotes via
T16154 314-327 NN denotes nephrogenesis
T16153 307-313 VB denotes induce
T16152 304-306 TO denotes to
T16151 293-297 VBN denotes been
T16150 289-292 VBZ denotes has
T16149 266-277 JJ denotes metanephric
T16148 278-288 NN denotes mesenchyme
T16147 262-265 DT denotes the
T16146 259-261 IN denotes to
T16145 246-254 JJ denotes ureteric
T16144 255-258 NN denotes bud
T16143 242-245 DT denotes the
T16142 237-241 IN denotes from
T16141 227-236 NN denotes signaling
T16140 221-226 NN denotes Wnt9b
T16139 298-303 VBN denotes shown
T16138 218-220 IN denotes as
T16137 216-218 , denotes ,
T16136 205-216 JJ denotes interesting
T16135 192-204 RB denotes particularly
T16134 188-191 VBD denotes was
T16133 183-187 DT denotes This
T16132 182-360 sentence denotes This was particularly interesting, as Wnt9b signaling from the ureteric bud to the metanephric mesenchyme has been shown to induce nephrogenesis via canonical Wnt signaling [2].
T16131 181-182 . denotes .
T16130 173-181 RB denotes normally
T16129 164-172 NNS denotes nephrons
T16128 134-145 JJ denotes metanephric
T16126 146-156 NN denotes mesenchyme
T16125 123-126 DT denotes the
T16124 121-123 , denotes ,
T16123 157-163 VBD denotes formed
T16122 109-121 RB denotes Nevertheless
T16121 108-182 sentence denotes Nevertheless, the mutant metanephric mesenchyme formed nephrons normally.
T16120 107-108 . denotes .
T16119 95-103 JJ denotes ureteric
T16118 104-107 NN denotes bud
T16117 91-94 DT denotes the
T16116 86-90 VBZ denotes caps
T16115 81-85 WDT denotes that
T16114 70-80 NN denotes mesenchyme
T16113 60-69 VBN denotes thickened
T16112 57-59 IN denotes of
T16111 52-56 NN denotes zone
T16110 48-51 DT denotes the
T16109 45-47 IN denotes of
T16108 35-44 NN denotes expansion
T16107 32-34 DT denotes an
T16106 20-24 RB denotes also
T16105 25-31 VBD denotes showed
T16104 10-11 CD denotes 2
T16103 9-10 HYPH denotes /
T16102 4-9 NN denotes Pygo1
T16101 12-19 NNS denotes mutants
T16100 0-3 DT denotes The
R4334 T16100 T16101 det The,mutants
R4336 T16101 T16105 nsubj mutants,showed
R4337 T16102 T16101 nmod Pygo1,mutants
R4339 T16103 T16102 punct /,Pygo1
R4340 T16104 T16102 nummod 2,Pygo1
R4342 T16106 T16105 advmod also,showed
R4343 T16107 T16108 det an,expansion
R4344 T16108 T16105 dobj expansion,showed
R4346 T16109 T16108 prep of,expansion
R4347 T16110 T16111 det the,zone
R4348 T16111 T16109 pobj zone,of
R4349 T16112 T16111 prep of,zone
R4350 T16113 T16114 amod thickened,mesenchyme
R4353 T16114 T16112 pobj mesenchyme,of
R4355 T16115 T16116 dep that,caps
R4357 T16116 T16111 relcl caps,zone
R4358 T16117 T16118 det the,bud
R4359 T16118 T16116 dobj bud,caps
R4361 T16119 T16118 amod ureteric,bud
R4362 T16120 T16105 punct .,showed
R4364 T16122 T16123 advmod Nevertheless,formed
R4366 T16124 T16123 punct ", ",formed
R4367 T16125 T16126 det the,mesenchyme
R4368 T16126 T16123 nsubj mesenchyme,formed
R4370 T16127 T16126 nmod mutant,mesenchyme
R4371 T16128 T16126 amod metanephric,mesenchyme
R4373 T16129 T16123 dobj nephrons,formed
R4374 T16130 T16123 advmod normally,formed
R4375 T16131 T16123 punct .,formed
R4378 T16133 T16134 nsubj This,was
R4380 T16135 T16136 advmod particularly,interesting
R4382 T16136 T16134 acomp interesting,was
R4383 T16137 T16134 punct ", ",was
R4384 T16138 T16139 mark as,shown
R4386 T16139 T16134 advcl shown,was
R4388 T16140 T16141 compound Wnt9b,signaling
R4389 T16141 T16139 nsubjpass signaling,shown
R4390 T16142 T16141 prep from,signaling
R4392 T16143 T16144 det the,bud
R4393 T16144 T16142 pobj bud,from
R4394 T16145 T16144 amod ureteric,bud
R4396 T16146 T16142 prep to,from
R4397 T16147 T16148 det the,mesenchyme
R4399 T16148 T16146 pobj mesenchyme,to
R4400 T16149 T16148 amod metanephric,mesenchyme
R4401 T16150 T16139 aux has,shown
R4402 T16151 T16139 auxpass been,shown
R4403 T16152 T16153 aux to,induce
R4404 T16153 T16139 xcomp induce,shown
R4406 T16154 T16153 dobj nephrogenesis,induce
R4407 T16155 T16153 prep via,induce
R4408 T16156 T16157 amod canonical,signaling
R4410 T16157 T16155 pobj signaling,via
R4411 T16158 T16157 compound Wnt,signaling
R4412 T16159 T16160 punct [,2
R4414 T16160 T16153 parataxis 2,induce
R4415 T16161 T16160 punct ],2
R4416 T16162 T16134 punct .,was

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T15228 332-355 GO:0060070 denotes canonical Wnt signaling
T15227 314-327 GO:0001822 denotes nephrogenesis
T15226 266-288 UBERON:0003220 denotes metanephric mesenchyme
T15225 246-258 UBERON:0000084 denotes ureteric bud
T15224 227-236 GO_EXT:cell_communication_or_signaling_or_signal_transduction denotes signaling
T15223 221-226 PR_EXT:000017453 denotes Wnt9b
T15222 164-172 UBERON:0001285 denotes nephrons
T15221 134-156 UBERON:0003220 denotes metanephric mesenchyme
T15220 127-133 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T15219 95-107 UBERON:0000084 denotes ureteric bud
T15218 70-80 UBERON:0003104 denotes mesenchyme
T15217 12-19 SO_EXT:sequence_altered_entity denotes mutants
T15216 4-9 PR_EXT:000013523 denotes Pygo1

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T14996 332-355 GO:0060070 denotes canonical Wnt signaling
T14995 314-327 GO:0001822 denotes nephrogenesis
T14994 266-288 UBERON:0003220 denotes metanephric mesenchyme
T14993 246-258 UBERON:0000084 denotes ureteric bud
T14992 221-226 PR:000017453 denotes Wnt9b
T14991 164-172 UBERON:0001285 denotes nephrons
T14990 134-156 UBERON:0003220 denotes metanephric mesenchyme
T14989 95-107 UBERON:0000084 denotes ureteric bud
T14988 70-80 UBERON:0003104 denotes mesenchyme
T14987 4-9 PR:000013523 denotes Pygo1

2_test

Id Subject Object Predicate Lexical cue
17425782-16054034-8469482 357-358 16054034 denotes 2