PMC:1853120 / 47416-48011 JSONTXT

Annnotations TAB JSON ListView MergeView

    craft-sa-dev

    {"project":"craft-sa-dev","denotations":[{"id":"T25230","span":{"begin":0,"end":9},"obj":"VBN"},{"id":"T25231","span":{"begin":10,"end":16},"obj":"NNS"},{"id":"T25232","span":{"begin":22,"end":27},"obj":"VBN"},{"id":"T25233","span":{"begin":17,"end":21},"obj":"VBD"},{"id":"T25234","span":{"begin":28,"end":30},"obj":"IN"},{"id":"T25235","span":{"begin":31,"end":36},"obj":"NNP"},{"id":"T25236","span":{"begin":39,"end":47},"obj":"NN"},{"id":"T25237","span":{"begin":36,"end":38},"obj":"POS"},{"id":"T25238","span":{"begin":48,"end":50},"obj":"CC"},{"id":"T25239","span":{"begin":51,"end":60},"obj":"NN"},{"id":"T25240","span":{"begin":61,"end":69},"obj":"VBN"},{"id":"T25241","span":{"begin":60,"end":61},"obj":"HYPH"},{"id":"T25242","span":{"begin":70,"end":78},"obj":"NN"},{"id":"T25243","span":{"begin":79,"end":88},"obj":"RB"},{"id":"T25244","span":{"begin":89,"end":91},"obj":"IN"},{"id":"T25245","span":{"begin":92,"end":93},"obj":"CD"},{"id":"T25246","span":{"begin":94,"end":96},"obj":"NN"},{"id":"T25247","span":{"begin":96,"end":98},"obj":","},{"id":"T25248","span":{"begin":98,"end":111},"obj":"RB"},{"id":"T25249","span":{"begin":112,"end":122},"obj":"VBN"},{"id":"T25250","span":{"begin":123,"end":125},"obj":"IN"},{"id":"T25251","span":{"begin":126,"end":127},"obj":"DT"},{"id":"T25252","span":{"begin":143,"end":149},"obj":"NN"},{"id":"T25253","span":{"begin":128,"end":134},"obj":"VBN"},{"id":"T25254","span":{"begin":135,"end":142},"obj":"NN"},{"id":"T25255","span":{"begin":149,"end":151},"obj":","},{"id":"T25256","span":{"begin":151,"end":154},"obj":"CC"},{"id":"T25257","span":{"begin":155,"end":163},"obj":"VBN"},{"id":"T25258","span":{"begin":164,"end":166},"obj":"IN"},{"id":"T25259","span":{"begin":167,"end":175},"obj":"NN"},{"id":"T25260","span":{"begin":176,"end":179},"obj":"NN"},{"id":"T25261","span":{"begin":179,"end":180},"obj":"."},{"id":"T25262","span":{"begin":180,"end":269},"obj":"sentence"},{"id":"T25263","span":{"begin":181,"end":189},"obj":"NNS"},{"id":"T25264","span":{"begin":202,"end":216},"obj":"VBN"},{"id":"T25265","span":{"begin":190,"end":191},"obj":"-LRB-"},{"id":"T25266","span":{"begin":193,"end":195},"obj":"NNS"},{"id":"T25267","span":{"begin":191,"end":192},"obj":"CD"},{"id":"T25268","span":{"begin":195,"end":196},"obj":"-RRB-"},{"id":"T25269","span":{"begin":197,"end":201},"obj":"VBD"},{"id":"T25270","span":{"begin":216,"end":218},"obj":","},{"id":"T25271","span":{"begin":218,"end":228},"obj":"VBN"},{"id":"T25272","span":{"begin":228,"end":230},"obj":","},{"id":"T25273","span":{"begin":230,"end":233},"obj":"CC"},{"id":"T25274","span":{"begin":234,"end":241},"obj":"VBN"},{"id":"T25275","span":{"begin":242,"end":246},"obj":"IN"},{"id":"T25276","span":{"begin":247,"end":258},"obj":"NN"},{"id":"T25277","span":{"begin":259,"end":262},"obj":"CC"},{"id":"T25278","span":{"begin":263,"end":268},"obj":"NN"},{"id":"T25279","span":{"begin":268,"end":269},"obj":"."},{"id":"T25280","span":{"begin":269,"end":432},"obj":"sentence"},{"id":"T25281","span":{"begin":270,"end":273},"obj":"IN"},{"id":"T25282","span":{"begin":319,"end":326},"obj":"VBN"},{"id":"T25283","span":{"begin":274,"end":279},"obj":"NN"},{"id":"T25284","span":{"begin":280,"end":288},"obj":"NNS"},{"id":"T25285","span":{"begin":288,"end":290},"obj":","},{"id":"T25286","span":{"begin":290,"end":304},"obj":"VBN"},{"id":"T25287","span":{"begin":305,"end":313},"obj":"NNS"},{"id":"T25288","span":{"begin":314,"end":318},"obj":"VBD"},{"id":"T25289","span":{"begin":327,"end":331},"obj":"IN"},{"id":"T25290","span":{"begin":332,"end":342},"obj":"NN"},{"id":"T25291","span":{"begin":343,"end":344},"obj":"NN"},{"id":"T25292","span":{"begin":345,"end":348},"obj":"IN"},{"id":"T25293","span":{"begin":349,"end":351},"obj":"CD"},{"id":"T25294","span":{"begin":352,"end":355},"obj":"NNS"},{"id":"T25295","span":{"begin":356,"end":359},"obj":"CC"},{"id":"T25296","span":{"begin":360,"end":368},"obj":"VBN"},{"id":"T25297","span":{"begin":369,"end":371},"obj":"IN"},{"id":"T25298","span":{"begin":372,"end":375},"obj":"CD"},{"id":"T25299","span":{"begin":375,"end":376},"obj":"NN"},{"id":"T25300","span":{"begin":386,"end":394},"obj":"NN"},{"id":"T25301","span":{"begin":377,"end":385},"obj":"NN"},{"id":"T25302","span":{"begin":395,"end":397},"obj":"IN"},{"id":"T25303","span":{"begin":398,"end":401},"obj":"NN"},{"id":"T25304","span":{"begin":402,"end":405},"obj":"IN"},{"id":"T25305","span":{"begin":406,"end":407},"obj":"CD"},{"id":"T25306","span":{"begin":408,"end":411},"obj":"NNS"},{"id":"T25307","span":{"begin":412,"end":414},"obj":"IN"},{"id":"T25308","span":{"begin":415,"end":419},"obj":"NN"},{"id":"T25309","span":{"begin":420,"end":431},"obj":"NN"},{"id":"T25310","span":{"begin":431,"end":432},"obj":"."},{"id":"T25311","span":{"begin":432,"end":595},"obj":"sentence"},{"id":"T25312","span":{"begin":433,"end":445},"obj":"RB"},{"id":"T25313","span":{"begin":487,"end":495},"obj":"VBN"},{"id":"T25314","span":{"begin":445,"end":447},"obj":","},{"id":"T25315","span":{"begin":447,"end":454},"obj":"JJ"},{"id":"T25316","span":{"begin":455,"end":463},"obj":"NN"},{"id":"T25317","span":{"begin":464,"end":466},"obj":"IN"},{"id":"T25318","span":{"begin":467,"end":476},"obj":"JJ"},{"id":"T25319","span":{"begin":477,"end":482},"obj":"NNS"},{"id":"T25320","span":{"begin":483,"end":486},"obj":"VBD"},{"id":"T25321","span":{"begin":496,"end":501},"obj":"VBG"},{"id":"T25322","span":{"begin":502,"end":509},"obj":"NN"},{"id":"T25323","span":{"begin":510,"end":513},"obj":"NN"},{"id":"T25324","span":{"begin":514,"end":515},"obj":"-LRB-"},{"id":"T25325","span":{"begin":515,"end":523},"obj":"NNP"},{"id":"T25326","span":{"begin":523,"end":525},"obj":","},{"id":"T25327","span":{"begin":525,"end":548},"obj":"NN"},{"id":"T25328","span":{"begin":548,"end":549},"obj":"-RRB-"},{"id":"T25329","span":{"begin":550,"end":559},"obj":"VBG"},{"id":"T25330","span":{"begin":560,"end":562},"obj":"IN"},{"id":"T25331","span":{"begin":563,"end":566},"obj":"DT"},{"id":"T25332","span":{"begin":567,"end":579},"obj":"NN"},{"id":"T25333","span":{"begin":582,"end":594},"obj":"NNS"},{"id":"T25334","span":{"begin":579,"end":581},"obj":"POS"},{"id":"T25335","span":{"begin":594,"end":595},"obj":"."}],"relations":[{"id":"R7002","pred":"amod","subj":"T25230","obj":"T25231"},{"id":"R7003","pred":"nsubjpass","subj":"T25231","obj":"T25232"},{"id":"R7004","pred":"auxpass","subj":"T25233","obj":"T25232"},{"id":"R7005","pred":"prep","subj":"T25234","obj":"T25232"},{"id":"R7006","pred":"poss","subj":"T25235","obj":"T25236"},{"id":"R7007","pred":"pobj","subj":"T25236","obj":"T25234"},{"id":"R7008","pred":"case","subj":"T25237","obj":"T25235"},{"id":"R7009","pred":"cc","subj":"T25238","obj":"T25236"},{"id":"R7010","pred":"npadvmod","subj":"T25239","obj":"T25240"},{"id":"R7011","pred":"amod","subj":"T25240","obj":"T25242"},{"id":"R7012","pred":"punct","subj":"T25241","obj":"T25240"},{"id":"R7013","pred":"conj","subj":"T25242","obj":"T25236"},{"id":"R7014","pred":"advmod","subj":"T25243","obj":"T25232"},{"id":"R7015","pred":"prep","subj":"T25244","obj":"T25232"},{"id":"R7016","pred":"nummod","subj":"T25245","obj":"T25246"},{"id":"R7017","pred":"pobj","subj":"T25246","obj":"T25244"},{"id":"R7018","pred":"punct","subj":"T25247","obj":"T25232"},{"id":"R7019","pred":"advmod","subj":"T25248","obj":"T25249"},{"id":"R7020","pred":"conj","subj":"T25249","obj":"T25232"},{"id":"R7021","pred":"prep","subj":"T25250","obj":"T25249"},{"id":"R7022","pred":"det","subj":"T25251","obj":"T25252"},{"id":"R7023","pred":"pobj","subj":"T25252","obj":"T25250"},{"id":"R7024","pred":"amod","subj":"T25253","obj":"T25252"},{"id":"R7025","pred":"compound","subj":"T25254","obj":"T25252"},{"id":"R7026","pred":"punct","subj":"T25255","obj":"T25249"},{"id":"R7027","pred":"cc","subj":"T25256","obj":"T25249"},{"id":"R7028","pred":"conj","subj":"T25257","obj":"T25249"},{"id":"R7029","pred":"prep","subj":"T25258","obj":"T25257"},{"id":"R7030","pred":"compound","subj":"T25259","obj":"T25260"},{"id":"R7031","pred":"pobj","subj":"T25260","obj":"T25258"},{"id":"R7032","pred":"punct","subj":"T25261","obj":"T25232"},{"id":"R7033","pred":"nsubjpass","subj":"T25263","obj":"T25264"},{"id":"R7034","pred":"punct","subj":"T25265","obj":"T25266"},{"id":"R7035","pred":"parataxis","subj":"T25266","obj":"T25263"},{"id":"R7036","pred":"nummod","subj":"T25267","obj":"T25266"},{"id":"R7037","pred":"punct","subj":"T25268","obj":"T25266"},{"id":"R7038","pred":"auxpass","subj":"T25269","obj":"T25264"},{"id":"R7039","pred":"punct","subj":"T25270","obj":"T25264"},{"id":"R7040","pred":"conj","subj":"T25271","obj":"T25264"},{"id":"R7041","pred":"punct","subj":"T25272","obj":"T25271"},{"id":"R7042","pred":"cc","subj":"T25273","obj":"T25271"},{"id":"R7043","pred":"conj","subj":"T25274","obj":"T25271"},{"id":"R7044","pred":"prep","subj":"T25275","obj":"T25274"},{"id":"R7045","pred":"pobj","subj":"T25276","obj":"T25275"},{"id":"R7046","pred":"cc","subj":"T25277","obj":"T25276"},{"id":"R7047","pred":"conj","subj":"T25278","obj":"T25276"},{"id":"R7048","pred":"punct","subj":"T25279","obj":"T25264"},{"id":"R7049","pred":"prep","subj":"T25281","obj":"T25282"},{"id":"R7050","pred":"compound","subj":"T25283","obj":"T25284"},{"id":"R7051","pred":"pobj","subj":"T25284","obj":"T25281"},{"id":"R7052","pred":"punct","subj":"T25285","obj":"T25282"},{"id":"R7053","pred":"amod","subj":"T25286","obj":"T25287"},{"id":"R7054","pred":"nsubjpass","subj":"T25287","obj":"T25282"},{"id":"R7055","pred":"auxpass","subj":"T25288","obj":"T25282"},{"id":"R7056","pred":"prep","subj":"T25289","obj":"T25282"},{"id":"R7057","pred":"compound","subj":"T25290","obj":"T25291"},{"id":"R7058","pred":"pobj","subj":"T25291","obj":"T25289"},{"id":"R7059","pred":"prep","subj":"T25292","obj":"T25282"},{"id":"R7060","pred":"nummod","subj":"T25293","obj":"T25294"},{"id":"R7061","pred":"pobj","subj":"T25294","obj":"T25292"},{"id":"R7062","pred":"cc","subj":"T25295","obj":"T25282"},{"id":"R7063","pred":"conj","subj":"T25296","obj":"T25282"},{"id":"R7064","pred":"prep","subj":"T25297","obj":"T25296"},{"id":"R7065","pred":"nummod","subj":"T25298","obj":"T25299"},{"id":"R7066","pred":"compound","subj":"T25299","obj":"T25300"},{"id":"R7067","pred":"pobj","subj":"T25300","obj":"T25297"},{"id":"R7068","pred":"compound","subj":"T25301","obj":"T25300"},{"id":"R7069","pred":"prep","subj":"T25302","obj":"T25296"},{"id":"R7070","pred":"pobj","subj":"T25303","obj":"T25302"},{"id":"R7071","pred":"prep","subj":"T25304","obj":"T25296"},{"id":"R7072","pred":"nummod","subj":"T25305","obj":"T25306"},{"id":"R7073","pred":"pobj","subj":"T25306","obj":"T25304"},{"id":"R7074","pred":"prep","subj":"T25307","obj":"T25296"},{"id":"R7075","pred":"compound","subj":"T25308","obj":"T25309"},{"id":"R7076","pred":"pobj","subj":"T25309","obj":"T25307"},{"id":"R7077","pred":"punct","subj":"T25310","obj":"T25282"},{"id":"R7078","pred":"advmod","subj":"T25312","obj":"T25313"},{"id":"R7079","pred":"punct","subj":"T25314","obj":"T25313"},{"id":"R7080","pred":"amod","subj":"T25315","obj":"T25316"},{"id":"R7081","pred":"nsubjpass","subj":"T25316","obj":"T25313"},{"id":"R7082","pred":"prep","subj":"T25317","obj":"T25316"},{"id":"R7083","pred":"amod","subj":"T25318","obj":"T25319"},{"id":"R7084","pred":"pobj","subj":"T25319","obj":"T25317"},{"id":"R7085","pred":"auxpass","subj":"T25320","obj":"T25313"},{"id":"R7086","pred":"advcl","subj":"T25321","obj":"T25313"},{"id":"R7087","pred":"compound","subj":"T25322","obj":"T25323"},{"id":"R7088","pred":"dobj","subj":"T25323","obj":"T25321"},{"id":"R7089","pred":"punct","subj":"T25324","obj":"T25325"},{"id":"R7090","pred":"parataxis","subj":"T25325","obj":"T25323"},{"id":"R7091","pred":"punct","subj":"T25326","obj":"T25325"},{"id":"R7092","pred":"npadvmod","subj":"T25327","obj":"T25325"},{"id":"R7093","pred":"punct","subj":"T25328","obj":"T25325"},{"id":"R7094","pred":"prep","subj":"T25329","obj":"T25321"},{"id":"R7095","pred":"prep","subj":"T25330","obj":"T25329"},{"id":"R7096","pred":"det","subj":"T25331","obj":"T25332"},{"id":"R7097","pred":"poss","subj":"T25332","obj":"T25333"},{"id":"R7098","pred":"pobj","subj":"T25333","obj":"T25330"},{"id":"R7099","pred":"case","subj":"T25334","obj":"T25332"},{"id":"R7100","pred":"punct","subj":"T25335","obj":"T25313"}],"text":"Dissected testes were fixed in Bouin's fixative or phosphate-buffered formalin overnight at 4 °C, progressively dehydrated in a graded ethanol series, and embedded in paraffin wax. Sections (6 μm) were deparaffinized, rehydrated, and stained with hematoxylin and eosin. For TUNEL analyses, deparaffinized sections were treated with proteinase K for 15 min and quenched in 3.0% hydrogen peroxide in PBS for 5 min at room temperature. Subsequently, nuclear staining in apoptotic cells was detected using ApopTag kit (Chemicon, http://www.chemicon.com) according to the manufacturer's instructions."}

    craft-ca-core-dev

    {"project":"craft-ca-core-dev","denotations":[{"id":"T25199","span":{"begin":10,"end":16},"obj":"UBERON:0000473"},{"id":"T25200","span":{"begin":39,"end":47},"obj":"CHEBI:50913"},{"id":"T25201","span":{"begin":70,"end":78},"obj":"CHEBI:16842"},{"id":"T25202","span":{"begin":135,"end":142},"obj":"CHEBI:16236"},{"id":"T25203","span":{"begin":176,"end":179},"obj":"CHEBI:73702"},{"id":"T25204","span":{"begin":247,"end":258},"obj":"CHEBI:51686"},{"id":"T25205","span":{"begin":377,"end":394},"obj":"CHEBI:16240"},{"id":"T25206","span":{"begin":447,"end":454},"obj":"GO:0005634"},{"id":"T25207","span":{"begin":467,"end":482},"obj":"CL:0000445"}],"text":"Dissected testes were fixed in Bouin's fixative or phosphate-buffered formalin overnight at 4 °C, progressively dehydrated in a graded ethanol series, and embedded in paraffin wax. Sections (6 μm) were deparaffinized, rehydrated, and stained with hematoxylin and eosin. For TUNEL analyses, deparaffinized sections were treated with proteinase K for 15 min and quenched in 3.0% hydrogen peroxide in PBS for 5 min at room temperature. Subsequently, nuclear staining in apoptotic cells was detected using ApopTag kit (Chemicon, http://www.chemicon.com) according to the manufacturer's instructions."}

    craft-ca-core-ex-dev

    {"project":"craft-ca-core-ex-dev","denotations":[{"id":"T25208","span":{"begin":10,"end":16},"obj":"UBERON:0000473"},{"id":"T25209","span":{"begin":39,"end":47},"obj":"CHEBI_EXT:50913"},{"id":"T25210","span":{"begin":51,"end":60},"obj":"CHEBI_EXT:phosphate"},{"id":"T25211","span":{"begin":61,"end":69},"obj":"CHEBI_CHMO_EXT:buffer_process"},{"id":"T25212","span":{"begin":70,"end":78},"obj":"CHEBI:16842"},{"id":"T25213","span":{"begin":135,"end":142},"obj":"CHEBI:16236"},{"id":"T25214","span":{"begin":176,"end":179},"obj":"CHEBI:73702"},{"id":"T25215","span":{"begin":247,"end":258},"obj":"CHEBI:51686"},{"id":"T25216","span":{"begin":263,"end":268},"obj":"CHEBI_EXT:eosin"},{"id":"T25217","span":{"begin":332,"end":342},"obj":"GO_EXT:0008233"},{"id":"T25218","span":{"begin":377,"end":394},"obj":"CHEBI:16240"},{"id":"T25219","span":{"begin":447,"end":454},"obj":"GO:0005634"},{"id":"T25220","span":{"begin":467,"end":476},"obj":"GO_PATO_EXT:apoptotic_process_or_quality"},{"id":"T25221","span":{"begin":467,"end":482},"obj":"CL:0000445"},{"id":"T25222","span":{"begin":477,"end":482},"obj":"CL_GO_EXT:cell"}],"text":"Dissected testes were fixed in Bouin's fixative or phosphate-buffered formalin overnight at 4 °C, progressively dehydrated in a graded ethanol series, and embedded in paraffin wax. Sections (6 μm) were deparaffinized, rehydrated, and stained with hematoxylin and eosin. For TUNEL analyses, deparaffinized sections were treated with proteinase K for 15 min and quenched in 3.0% hydrogen peroxide in PBS for 5 min at room temperature. Subsequently, nuclear staining in apoptotic cells was detected using ApopTag kit (Chemicon, http://www.chemicon.com) according to the manufacturer's instructions."}