> top > docs > PMC:1853120 > spans > 22993-23651 > annotations

PMC:1853120 / 22993-23651 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T29623 0-6 JJ denotes Normal
T29624 7-15 NN denotes Synapsis
T29625 16-19 CC denotes and
T29626 20-33 NN denotes Recombination
T29627 34-36 IN denotes in
T29628 37-42 NN denotes Dmrt7
T29629 43-49 NN denotes Mutant
T29630 55-60 NNS denotes Cells
T29631 50-54 NN denotes Germ
T29632 60-197 sentence denotes (A) Testicular cells from Dmrt7 heterozygous (+/−) or homozygous (−/−) mutant mice were spread and stained with antibody to SYCP3 (red).
T29633 61-62 -LRB- denotes (
T29634 62-63 LS denotes A
T29635 149-155 VBN denotes spread
T29636 63-64 -RRB- denotes )
T29637 65-75 JJ denotes Testicular
T29638 76-81 NNS denotes cells
T29639 82-86 IN denotes from
T29640 87-92 NN denotes Dmrt7
T29641 132-138 NN denotes mutant
T29642 93-105 JJ denotes heterozygous
T29643 106-107 -LRB- denotes (
T29644 109-110 SYM denotes −
T29645 107-108 SYM denotes +
T29646 108-109 HYPH denotes /
T29647 110-111 -RRB- denotes )
T29648 112-114 CC denotes or
T29649 115-125 JJ denotes homozygous
T29650 126-127 -LRB- denotes (
T29651 129-130 SYM denotes −
T29652 127-128 SYM denotes −
T29653 128-129 HYPH denotes /
T29654 130-131 -RRB- denotes )
T29655 139-143 NNS denotes mice
T29656 144-148 VBD denotes were
T29657 156-159 CC denotes and
T29658 160-167 VBN denotes stained
T29659 168-172 IN denotes with
T29660 173-181 NN denotes antibody
T29661 182-184 IN denotes to
T29662 185-190 NN denotes SYCP3
T29663 191-192 -LRB- denotes (
T29664 192-195 JJ denotes red
T29665 195-196 -RRB- denotes )
T29666 196-197 . denotes .
T29667 197-299 sentence denotes The developmental stages of meiotic prophase based on SYCP3 organization are indicated in each panel.
T29668 198-201 DT denotes The
T29669 216-222 NNS denotes stages
T29670 202-215 JJ denotes developmental
T29671 275-284 VBN denotes indicated
T29672 223-225 IN denotes of
T29673 226-233 JJ denotes meiotic
T29674 234-242 NN denotes prophase
T29675 243-248 VBN denotes based
T29676 249-251 IN denotes on
T29677 252-257 NN denotes SYCP3
T29678 258-270 NN denotes organization
T29679 271-274 VBP denotes are
T29680 285-287 IN denotes in
T29681 288-292 DT denotes each
T29682 293-298 NN denotes panel
T29683 298-299 . denotes .
T29684 299-450 sentence denotes By pachynema, all autosomes are fully synapsed, and the XY bivalent is synapsed only at the pseudoautosomal region in both wild-type and mutant cells.
T29685 300-302 IN denotes By
T29686 338-346 VBN denotes synapsed
T29687 303-312 NN denotes pachynema
T29688 312-314 , denotes ,
T29689 314-317 DT denotes all
T29690 318-327 NNS denotes autosomes
T29691 328-331 VBP denotes are
T29692 332-337 RB denotes fully
T29693 346-348 , denotes ,
T29694 348-351 CC denotes and
T29695 352-355 DT denotes the
T29696 356-358 NN denotes XY
T29697 371-379 VBN denotes synapsed
T29698 359-367 JJ denotes bivalent
T29699 368-370 VBZ denotes is
T29700 380-384 RB denotes only
T29701 385-387 IN denotes at
T29702 388-391 DT denotes the
T29703 408-414 NN denotes region
T29704 392-407 JJ denotes pseudoautosomal
T29705 415-417 IN denotes in
T29706 418-422 CC denotes both
T29707 428-432 NN denotes type
T29708 423-427 JJ denotes wild
T29709 427-428 HYPH denotes -
T29710 444-449 NNS denotes cells
T29711 433-436 CC denotes and
T29712 437-443 NN denotes mutant
T29713 449-450 . denotes .
T29714 450-566 sentence denotes (B) Testicular cells in zygonema and pachynema spread and stained with antibodies to RAD51 (green) and SYCP3 (red).
T29715 451-452 -LRB- denotes (
T29716 452-453 LS denotes B
T29717 466-471 NNS denotes cells
T29718 453-454 -RRB- denotes )
T29719 455-465 JJ denotes Testicular
T29720 472-474 IN denotes in
T29721 475-483 NN denotes zygonema
T29722 484-487 CC denotes and
T29723 488-497 NN denotes pachynema
T29724 498-504 VBN denotes spread
T29725 505-508 CC denotes and
T29726 509-516 VBN denotes stained
T29727 517-521 IN denotes with
T29728 522-532 NNS denotes antibodies
T29729 533-535 IN denotes to
T29730 536-541 NN denotes RAD51
T29731 542-543 -LRB- denotes (
T29732 543-548 JJ denotes green
T29733 548-549 -RRB- denotes )
T29734 550-553 CC denotes and
T29735 554-559 NN denotes SYCP3
T29736 560-561 -LRB- denotes (
T29737 561-564 JJ denotes red
T29738 564-565 -RRB- denotes )
T29739 565-566 . denotes .
T29740 566-658 sentence denotes Size and distribution of RAD51 foci are similar between wild-type and mutant spermatocytes.
T29741 567-571 NN denotes Size
T29742 603-606 VBP denotes are
T29743 572-575 CC denotes and
T29744 576-588 NN denotes distribution
T29745 589-591 IN denotes of
T29746 592-597 NN denotes RAD51
T29747 598-602 NNS denotes foci
T29748 607-614 JJ denotes similar
T29749 615-622 IN denotes between
T29750 623-627 JJ denotes wild
T29751 628-632 NN denotes type
T29752 627-628 HYPH denotes -
T29753 644-657 NNS denotes spermatocytes
T29754 633-636 CC denotes and
T29755 637-643 NN denotes mutant
T29756 657-658 . denotes .
R8259 T29623 T29624 amod Normal,Synapsis
R8260 T29625 T29624 cc and,Synapsis
R8261 T29626 T29624 conj Recombination,Synapsis
R8262 T29627 T29624 prep in,Synapsis
R8263 T29628 T29629 compound Dmrt7,Mutant
R8264 T29629 T29630 compound Mutant,Cells
R8265 T29630 T29627 pobj Cells,in
R8266 T29631 T29630 compound Germ,Cells
R8267 T29633 T29634 punct (,A
R8268 T29634 T29635 meta A,spread
R8269 T29636 T29634 punct ),A
R8270 T29637 T29638 amod Testicular,cells
R8271 T29638 T29635 nsubjpass cells,spread
R8272 T29639 T29638 prep from,cells
R8273 T29640 T29641 nmod Dmrt7,mutant
R8274 T29641 T29655 compound mutant,mice
R8275 T29642 T29641 amod heterozygous,mutant
R8276 T29643 T29644 punct (,−
R8277 T29644 T29642 punct −,heterozygous
R8278 T29645 T29644 punct +,−
R8279 T29646 T29644 punct /,−
R8280 T29647 T29644 punct ),−
R8281 T29648 T29642 cc or,heterozygous
R8282 T29649 T29642 conj homozygous,heterozygous
R8283 T29650 T29651 punct (,−
R8284 T29651 T29649 punct −,homozygous
R8285 T29652 T29651 punct −,−
R8286 T29653 T29651 punct /,−
R8287 T29654 T29651 punct ),−
R8288 T29655 T29639 pobj mice,from
R8289 T29656 T29635 auxpass were,spread
R8290 T29657 T29635 cc and,spread
R8291 T29658 T29635 conj stained,spread
R8292 T29659 T29658 prep with,stained
R8293 T29660 T29659 pobj antibody,with
R8294 T29661 T29660 prep to,antibody
R8295 T29662 T29661 pobj SYCP3,to
R8296 T29663 T29664 punct (,red
R8297 T29664 T29658 parataxis red,stained
R8298 T29665 T29664 punct ),red
R8299 T29666 T29635 punct .,spread
R8300 T29668 T29669 det The,stages
R8301 T29669 T29671 nsubjpass stages,indicated
R8302 T29670 T29669 amod developmental,stages
R8303 T29672 T29669 prep of,stages
R8304 T29673 T29674 amod meiotic,prophase
R8305 T29674 T29672 pobj prophase,of
R8306 T29675 T29669 prep based,stages
R8307 T29676 T29675 prep on,based
R8308 T29677 T29678 compound SYCP3,organization
R8309 T29678 T29676 pobj organization,on
R8310 T29679 T29671 auxpass are,indicated
R8311 T29680 T29671 prep in,indicated
R8312 T29681 T29682 det each,panel
R8313 T29682 T29680 pobj panel,in
R8314 T29683 T29671 punct .,indicated
R8315 T29685 T29686 prep By,synapsed
R8316 T29687 T29685 pobj pachynema,By
R8317 T29688 T29686 punct ", ",synapsed
R8318 T29689 T29690 det all,autosomes
R8319 T29690 T29686 nsubjpass autosomes,synapsed
R8320 T29691 T29686 auxpass are,synapsed
R8321 T29692 T29686 advmod fully,synapsed
R8322 T29693 T29686 punct ", ",synapsed
R8323 T29694 T29686 cc and,synapsed
R8324 T29695 T29696 det the,XY
R8325 T29696 T29697 nsubjpass XY,synapsed
R8326 T29697 T29686 conj synapsed,synapsed
R8327 T29698 T29696 amod bivalent,XY
R8328 T29699 T29697 auxpass is,synapsed
R8329 T29700 T29701 advmod only,at
R8330 T29701 T29697 prep at,synapsed
R8331 T29702 T29703 det the,region
R8332 T29703 T29701 pobj region,at
R8333 T29704 T29703 amod pseudoautosomal,region
R8334 T29705 T29697 prep in,synapsed
R8335 T29706 T29707 preconj both,type
R8336 T29707 T29710 nmod type,cells
R8337 T29708 T29707 amod wild,type
R8338 T29709 T29707 punct -,type
R8339 T29710 T29705 pobj cells,in
R8340 T29711 T29707 cc and,type
R8341 T29712 T29707 conj mutant,type
R8342 T29713 T29686 punct .,synapsed
R8343 T29715 T29716 punct (,B
R8344 T29716 T29717 meta B,cells
R8345 T29718 T29716 punct ),B
R8346 T29719 T29717 amod Testicular,cells
R8347 T29720 T29717 prep in,cells
R8348 T29721 T29720 pobj zygonema,in
R8349 T29722 T29721 cc and,zygonema
R8350 T29723 T29721 conj pachynema,zygonema
R8351 T29724 T29717 acl spread,cells
R8352 T29725 T29724 cc and,spread
R8353 T29726 T29724 conj stained,spread
R8354 T29727 T29726 prep with,stained
R8355 T29728 T29727 pobj antibodies,with
R8356 T29729 T29728 prep to,antibodies
R8357 T29730 T29729 pobj RAD51,to
R8358 T29731 T29732 punct (,green
R8359 T29732 T29730 parataxis green,RAD51
R8360 T29733 T29732 punct ),green
R8361 T29734 T29730 cc and,RAD51
R8362 T29735 T29730 conj SYCP3,RAD51
R8363 T29736 T29737 punct (,red
R8364 T29737 T29735 parataxis red,SYCP3
R8365 T29738 T29737 punct ),red
R8366 T29739 T29717 punct .,cells
R8367 T29741 T29742 nsubj Size,are
R8368 T29743 T29741 cc and,Size
R8369 T29744 T29741 conj distribution,Size
R8370 T29745 T29741 prep of,Size
R8371 T29746 T29747 compound RAD51,foci
R8372 T29747 T29745 pobj foci,of
R8373 T29748 T29742 acomp similar,are
R8374 T29749 T29742 prep between,are
R8375 T29750 T29751 amod wild,type
R8376 T29751 T29753 nmod type,spermatocytes
R8377 T29752 T29751 punct -,type
R8378 T29753 T29749 pobj spermatocytes,between
R8379 T29754 T29751 cc and,type
R8380 T29755 T29751 conj mutant,type
R8381 T29756 T29742 punct .,are

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T29562 7-15 GO:0007129 denotes Synapsis
T29563 37-42 PR:000006549 denotes Dmrt7
T29564 50-60 CL:0000586 denotes Germ Cells
T29565 65-75 UBERON:0000473 denotes Testicular
T29566 87-92 PR:000006549 denotes Dmrt7
T29567 139-143 NCBITaxon:10088 denotes mice
T29568 173-181 GO:0042571 denotes antibody
T29569 185-190 PR:000015865 denotes SYCP3
T29570 226-233 GO:0007126 denotes meiotic
T29571 234-242 GO:0051324 denotes prophase
T29572 252-257 PR:000015865 denotes SYCP3
T29573 303-312 GO:0000239 denotes pachynema
T29574 318-327 GO:0030849 denotes autosomes
T29575 338-346 GO:0007129 denotes synapsed
T29576 371-379 GO:0007129 denotes synapsed
T29577 455-465 UBERON:0000473 denotes Testicular
T29578 475-483 GO:0000238 denotes zygonema
T29579 488-497 GO:0000239 denotes pachynema
T29580 522-532 GO:0042571 denotes antibodies
T29581 536-541 PR:000013672 denotes RAD51
T29582 554-559 PR:000015865 denotes SYCP3
T29583 592-597 PR:000013672 denotes RAD51
T29584 644-657 CL:0000017 denotes spermatocytes

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T29585 7-15 GO:0007129 denotes Synapsis
T29586 20-33 GO_SO_EXT:sequence_rearrangement_process denotes Recombination
T29587 37-42 PR_EXT:000006549 denotes Dmrt7
T29588 43-49 SO_EXT:sequence_altered_entity_or_alteration_process denotes Mutant
T29589 50-60 CL:0000586 denotes Germ Cells
T29590 55-60 CL_GO_EXT:cell denotes Cells
T29591 65-75 UBERON:0000473 denotes Testicular
T29592 76-81 CL_GO_EXT:cell denotes cells
T29593 87-92 PR_EXT:000006549 denotes Dmrt7
T29594 107-108 SO_EXT:normal_or_wild_type_or_present denotes +
T29595 109-110 SO_EXT:sequence_nullness_or_absence denotes −
T29596 127-128 SO_EXT:sequence_nullness_or_absence denotes −
T29597 129-130 SO_EXT:sequence_nullness_or_absence denotes −
T29598 132-138 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T29599 139-143 NCBITaxon:10088 denotes mice
T29600 173-181 GO:0042571 denotes antibody
T29601 185-190 PR_EXT:000015865 denotes SYCP3
T29602 226-233 GO:0007126 denotes meiotic
T29603 234-242 GO:0051324 denotes prophase
T29604 252-257 PR_EXT:000015865 denotes SYCP3
T29605 303-312 GO:0000239 denotes pachynema
T29606 318-327 GO:0030849 denotes autosomes
T29607 338-346 GO:0007129 denotes synapsed
T29608 371-379 GO:0007129 denotes synapsed
T29609 423-432 SO_EXT:wild_type_entity_or_quality denotes wild-type
T29610 437-443 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T29611 444-449 CL_GO_EXT:cell denotes cells
T29612 455-465 UBERON:0000473 denotes Testicular
T29613 466-471 CL_GO_EXT:cell denotes cells
T29614 475-483 GO:0000238 denotes zygonema
T29615 488-497 GO:0000239 denotes pachynema
T29616 522-532 GO:0042571 denotes antibodies
T29617 536-541 PR_EXT:000013672 denotes RAD51
T29618 554-559 PR_EXT:000015865 denotes SYCP3
T29619 592-597 PR_EXT:000013672 denotes RAD51
T29620 623-632 SO_EXT:wild_type_entity_or_quality denotes wild-type
T29621 637-643 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T29622 644-657 CL:0000017 denotes spermatocytes