PMC:1635699 / 18680-19061 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1635699","sourcedb":"PMC","sourceid":"1635699","source_url":"https://www.ncbi.nlm.nih.gov/pmc/1635699","text":"• Gap parameter optimization has previously been done only for protein alignment programs. The first BRAliBase benchmark enabled several authors [25] to optimize parameters of their programs for RNA alignments. For example the performance of the previously lowest ranking program MAFFT increased enormously: the new version 5 including optimized parameters [25] is now top ranking.","tracks":[{"project":"2_test","denotations":[{"id":"17062125-15661851-1688911","span":{"begin":146,"end":148},"obj":"15661851"},{"id":"17062125-15661851-1688912","span":{"begin":358,"end":360},"obj":"15661851"}],"attributes":[{"subj":"17062125-15661851-1688911","pred":"source","obj":"2_test"},{"subj":"17062125-15661851-1688912","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"2_test","color":"#93c3ec","default":true}]}]}}