PMC:1635699 / 18680-19061 JSONTXT

{"project":"2_test","denotations":[{"id":"17062125-15661851-1688911","span":{"begin":146,"end":148},"obj":"15661851"},{"id":"17062125-15661851-1688912","span":{"begin":358,"end":360},"obj":"15661851"}],"text":"• Gap parameter optimization has previously been done only for protein alignment programs. The first BRAliBase benchmark enabled several authors [25] to optimize parameters of their programs for RNA alignments. For example the performance of the previously lowest ranking program MAFFT increased enormously: the new version 5 including optimized parameters [25] is now top ranking."}