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PMC:1584416 / 8770-9146 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T7362 1-9 VBN denotes depicted
T7363 10-12 IN denotes in
T7364 13-14 -LRB- denotes (
T7365 14-15 NN denotes A
T7366 15-16 -RRB- denotes )
T7367 16-17 . denotes .
T7368 17-143 sentence denotes The wt allele yields a 6.5-kilobase (kb) fragment, whereas both targeted Xpd†XP and Xpd†XPCS alleles yield a 5.1-kb fragment.
T7369 18-21 DT denotes The
T7370 25-31 NN denotes allele
T7371 22-24 NN denotes wt
T7372 32-38 VBZ denotes yields
T7373 39-40 DT denotes a
T7374 59-67 NN denotes fragment
T7375 41-44 CD denotes 6.5
T7376 45-53 NN denotes kilobase
T7377 44-45 HYPH denotes -
T7378 54-55 -LRB- denotes (
T7379 55-57 NN denotes kb
T7380 57-58 -RRB- denotes )
T7381 67-69 , denotes ,
T7382 69-76 IN denotes whereas
T7383 119-124 VBP denotes yield
T7384 77-81 CC denotes both
T7385 111-118 NNS denotes alleles
T7386 82-90 VBN denotes targeted
T7387 91-97 NN denotes Xpd†XP
T7388 98-101 CC denotes and
T7389 102-110 NN denotes Xpd†XPCS
T7390 125-126 DT denotes a
T7391 134-142 NN denotes fragment
T7392 127-130 CD denotes 5.1
T7393 131-133 NN denotes kb
T7394 130-131 HYPH denotes -
T7395 142-143 . denotes .
T7396 143-294 sentence denotes (C) Genotyping of wt and targeted alleles by PCR using primers F2, R1, and mR as indicated in (A) yields fragments of 399 bp and 468 bp, respectively.
T7397 144-145 -LRB- denotes (
T7398 145-146 LS denotes C
T7399 148-158 NN denotes Genotyping
T7400 146-147 -RRB- denotes )
T7401 159-161 IN denotes of
T7402 162-164 NN denotes wt
T7403 178-185 NNS denotes alleles
T7404 165-168 CC denotes and
T7405 169-177 VBN denotes targeted
T7406 186-188 IN denotes by
T7407 189-192 NN denotes PCR
T7408 193-198 VBG denotes using
T7409 199-206 NNS denotes primers
T7410 207-209 NN denotes F2
T7411 209-211 , denotes ,
T7412 211-213 NN denotes R1
T7413 213-215 , denotes ,
T7414 215-218 CC denotes and
T7415 219-221 NN denotes mR
T7416 222-224 IN denotes as
T7417 225-234 VBN denotes indicated
T7418 235-237 IN denotes in
T7419 238-239 -LRB- denotes (
T7420 239-240 LS denotes A
T7421 249-258 NNS denotes fragments
T7422 240-241 -RRB- denotes )
T7423 242-248 VBZ denotes yields
T7424 259-261 IN denotes of
T7425 262-265 CD denotes 399
T7426 266-268 NN denotes bp
T7427 269-272 CC denotes and
T7428 273-276 CD denotes 468
T7429 277-279 NN denotes bp
T7430 279-281 , denotes ,
T7431 281-293 RB denotes respectively
T7432 293-294 . denotes .
T7434 295-296 -LRB- denotes (
T7435 296-297 LS denotes D
T7437 297-298 -RRB- denotes )
T7438 299-301 NN denotes RT
T7439 302-305 NN denotes PCR
T7440 301-302 HYPH denotes -
T7441 306-315 NN denotes detection
T7442 316-318 IN denotes of
T7443 319-323 NN denotes mRNA
T7444 324-334 NN denotes expression
T7445 335-346 VBG denotes originating
T7446 347-351 IN denotes from
T7447 352-355 DT denotes the
T7449 356-364 VBN denotes targeted
T7450 365-368 NN denotes †XP
T7451 369-372 CC denotes and
R4975 T7363 T7362 prep in,depicted
R4976 T7364 T7363 punct (,in
R4977 T7365 T7363 pobj A,in
R4980 T7369 T7370 det The,allele
R4981 T7370 T7372 nsubj allele,yields
R4982 T7371 T7370 compound wt,allele
R4983 T7373 T7374 det a,fragment
R4984 T7374 T7372 dobj fragment,yields
R4985 T7375 T7376 nummod 6.5,kilobase
R4986 T7376 T7374 nmod kilobase,fragment
R4987 T7377 T7376 punct -,kilobase
R4988 T7378 T7376 punct (,kilobase
R4989 T7379 T7376 appos kb,kilobase
R4990 T7380 T7374 punct ),fragment
R4991 T7381 T7372 punct ", ",yields
R4992 T7382 T7383 mark whereas,yield
R4993 T7383 T7372 advcl yield,yields
R4994 T7384 T7385 preconj both,alleles
R4995 T7385 T7383 nsubj alleles,yield
R4996 T7386 T7385 amod targeted,alleles
R4997 T7387 T7385 nmod Xpd†XP,alleles
R4998 T7388 T7387 cc and,Xpd†XP
R4999 T7389 T7387 conj Xpd†XPCS,Xpd†XP
R5000 T7390 T7391 det a,fragment
R5001 T7391 T7383 dobj fragment,yield
R5002 T7392 T7393 nummod 5.1,kb
R5003 T7393 T7391 compound kb,fragment
R5004 T7394 T7393 punct -,kb
R5005 T7395 T7372 punct .,yields
R5006 T7397 T7398 punct (,C
R5007 T7398 T7399 meta C,Genotyping
R5008 T7400 T7398 punct ),C
R5009 T7401 T7399 prep of,Genotyping
R5010 T7402 T7403 nmod wt,alleles
R5011 T7403 T7401 pobj alleles,of
R5012 T7404 T7402 cc and,wt
R5013 T7405 T7402 conj targeted,wt
R5014 T7406 T7399 prep by,Genotyping
R5015 T7407 T7406 pobj PCR,by
R5016 T7408 T7399 acl using,Genotyping
R5017 T7409 T7408 dobj primers,using
R5018 T7410 T7409 appos F2,primers
R5019 T7411 T7410 punct ", ",F2
R5020 T7412 T7410 conj R1,F2
R5021 T7413 T7412 punct ", ",R1
R5022 T7414 T7412 cc and,R1
R5023 T7415 T7412 conj mR,R1
R5024 T7416 T7417 mark as,indicated
R5025 T7417 T7408 advcl indicated,using
R5026 T7418 T7408 prep in,using
R5027 T7419 T7420 punct (,A
R5028 T7420 T7421 meta A,fragments
R5029 T7421 T7418 pobj fragments,in
R5030 T7422 T7420 punct ),A
R5031 T7423 T7421 nmod yields,fragments
R5032 T7424 T7421 prep of,fragments
R5033 T7425 T7426 nummod 399,bp
R5034 T7426 T7424 pobj bp,of
R5035 T7427 T7426 cc and,bp
R5036 T7428 T7429 nummod 468,bp
R5037 T7429 T7426 conj bp,bp
R5038 T7430 T7408 punct ", ",using
R5039 T7431 T7408 advmod respectively,using
R5040 T7432 T7399 punct .,Genotyping
R5041 T7434 T7435 punct (,D
R5043 T7437 T7435 punct ),D
R5044 T7438 T7439 compound RT,PCR
R5045 T7439 T7441 compound PCR,detection
R5046 T7440 T7439 punct -,PCR
R5048 T7442 T7441 prep of,detection
R5049 T7443 T7444 compound mRNA,expression
R5050 T7444 T7442 pobj expression,of
R5051 T7445 T7444 acl originating,expression
R5052 T7446 T7445 prep from,originating
R5057 T7451 T7450 cc and,†XP

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6951 25-31 SO:0001023 denotes allele
T6952 91-94 PR:000007164 denotes Xpd
T6953 102-105 PR:000007164 denotes Xpd
T6954 111-118 SO:0001023 denotes alleles
T6955 178-185 SO:0001023 denotes alleles
T6956 199-206 SO:0000112 denotes primers
T6957 266-268 SO:0000028 denotes bp
T6958 277-279 SO:0000028 denotes bp
T6959 324-334 GO:0010467 denotes expression

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T7046 22-24 SO_EXT:wild_type_entity_or_quality denotes wt
T7047 25-31 SO_EXT:0001023 denotes allele
T7048 49-53 CHEBI_SO_EXT:base denotes base
T7049 56-57 CHEBI_SO_EXT:base denotes b
T7050 91-94 PR_EXT:000007164 denotes Xpd
T7051 102-105 PR_EXT:000007164 denotes Xpd
T7052 111-118 SO_EXT:0001023 denotes alleles
T7053 132-133 CHEBI_SO_EXT:base denotes b
T7054 162-164 SO_EXT:wild_type_entity_or_quality denotes wt
T7055 178-185 SO_EXT:0001023 denotes alleles
T7056 199-206 SO_EXT:0000112 denotes primers
T7057 266-268 SO_EXT:0000028 denotes bp
T7058 277-279 SO_EXT:0000028 denotes bp
T7059 299-301 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T7060 319-323 CHEBI_SO_EXT:mRNA denotes mRNA
T7061 324-334 GO:0010467 denotes expression