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PMC:1584416 / 35764-36162 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T6809 201-398 sentence denotes Two or more cell lines per genotype (except for the XpdTTD/†XP cells, in which only one cell line was used in repeated experiments) were used, and experiments were repeated 2–6 times per genotype.
T6810 202-205 CD denotes Two
T6811 219-224 NNS denotes lines
T6812 206-208 CC denotes or
T6813 209-213 JJR denotes more
T6814 214-218 NN denotes cell
T6815 339-343 VBN denotes used
T6816 225-228 IN denotes per
T6817 229-237 NN denotes genotype
T6818 238-239 -LRB- denotes (
T6819 239-245 IN denotes except
T6820 246-249 IN denotes for
T6821 250-253 DT denotes the
T6822 265-270 NNS denotes cells
T6823 254-260 NN denotes XpdTTD
T6824 261-264 NN denotes †XP
T6825 260-261 HYPH denotes /
T6826 270-272 , denotes ,
T6827 272-274 IN denotes in
T6828 304-308 VBN denotes used
T6829 275-280 WDT denotes which
T6830 281-285 RB denotes only
T6831 295-299 NN denotes line
T6832 286-289 CD denotes one
T6833 290-294 NN denotes cell
T6834 300-303 VBD denotes was
T6835 309-311 IN denotes in
T6836 312-320 VBN denotes repeated
T6837 321-332 NNS denotes experiments
T6838 332-333 -RRB- denotes )
T6839 334-338 VBD denotes were
T6840 343-345 , denotes ,
T6841 345-348 CC denotes and
T6842 349-360 NNS denotes experiments
T6843 366-374 VBN denotes repeated
T6844 361-365 VBD denotes were
T6845 375-376 CD denotes 2
T6846 377-378 CD denotes 6
T6847 376-377 HYPH denotes –
T6848 379-384 NNS denotes times
T6849 385-388 IN denotes per
T6850 389-397 NN denotes genotype
T6851 397-398 . denotes .
T6774 0-5 NN denotes Latex
T6775 11-20 NN denotes labelling
T6776 6-10 NN denotes bead
T6777 101-110 VBN denotes performed
T6778 21-24 CC denotes and
T6779 25-36 JJ denotes comparative
T6780 56-64 NN denotes analysis
T6781 37-55 NN denotes immunofluorescence
T6782 65-67 IN denotes of
T6783 68-71 DT denotes the
T6784 76-83 NN denotes subunit
T6785 72-75 NN denotes p62
T6786 84-86 IN denotes of
T6787 87-90 DT denotes the
T6788 91-96 NN denotes TFIIH
T6789 97-100 VBD denotes was
T6790 111-113 IN denotes as
T6791 114-123 VBN denotes described
T6792 124-134 RB denotes previously
T6793 135-136 -LRB- denotes [
T6794 139-141 CD denotes 17
T6795 136-138 CD denotes 16
T6796 138-139 , denotes ,
T6797 141-142 -RRB- denotes ]
T6798 143-148 VBG denotes using
T6799 149-156 JJ denotes primary
T6800 173-184 NNS denotes fibroblasts
T6801 157-162 NN denotes mouse
T6802 163-172 JJ denotes embryonic
T6803 185-187 IN denotes at
T6804 188-196 NNS denotes passages
T6805 197-198 CD denotes 2
T6806 198-199 SYM denotes –
T6807 199-200 CD denotes 5
T6808 200-201 . denotes .
R4651 T6774 T6775 compound Latex,labelling
R4652 T6775 T6777 nsubjpass labelling,performed
R4653 T6776 T6775 compound bead,labelling
R4654 T6778 T6775 cc and,labelling
R4655 T6779 T6780 amod comparative,analysis
R4656 T6780 T6775 conj analysis,labelling
R4657 T6781 T6780 compound immunofluorescence,analysis
R4658 T6782 T6780 prep of,analysis
R4659 T6783 T6784 det the,subunit
R4660 T6784 T6782 pobj subunit,of
R4661 T6785 T6784 compound p62,subunit
R4662 T6786 T6784 prep of,subunit
R4663 T6787 T6788 det the,TFIIH
R4664 T6788 T6786 pobj TFIIH,of
R4665 T6789 T6777 auxpass was,performed
R4666 T6790 T6791 mark as,described
R4667 T6791 T6777 advcl described,performed
R4668 T6792 T6791 advmod previously,described
R4669 T6793 T6794 punct [,17
R4670 T6794 T6791 parataxis 17,described
R4671 T6795 T6794 nummod 16,17
R4672 T6796 T6794 punct ",",17
R4673 T6797 T6794 punct ],17
R4674 T6798 T6777 advcl using,performed
R4675 T6799 T6800 amod primary,fibroblasts
R4676 T6800 T6798 dobj fibroblasts,using
R4677 T6801 T6800 nmod mouse,fibroblasts
R4678 T6802 T6800 amod embryonic,fibroblasts
R4679 T6803 T6798 prep at,using
R4680 T6804 T6805 nmod passages,2
R4681 T6805 T6803 pobj 2,at
R4682 T6806 T6807 punct –,5
R4683 T6807 T6805 prep 5,2
R4684 T6808 T6777 punct .,performed
R4685 T6810 T6811 nummod Two,lines
R4686 T6811 T6815 nsubjpass lines,used
R4687 T6812 T6810 cc or,Two
R4688 T6813 T6810 conj more,Two
R4689 T6814 T6811 compound cell,lines
R4690 T6816 T6811 prep per,lines
R4691 T6817 T6816 pobj genotype,per
R4692 T6818 T6819 punct (,except
R4693 T6819 T6811 parataxis except,lines
R4694 T6820 T6819 prep for,except
R4695 T6821 T6822 det the,cells
R4696 T6822 T6820 pobj cells,for
R4697 T6823 T6824 compound XpdTTD,†XP
R4698 T6824 T6822 compound †XP,cells
R4699 T6825 T6824 punct /,†XP
R4700 T6826 T6822 punct ", ",cells
R4701 T6827 T6828 prep in,used
R4702 T6828 T6822 relcl used,cells
R4703 T6829 T6827 pobj which,in
R4704 T6830 T6831 advmod only,line
R4705 T6831 T6828 nsubjpass line,used
R4706 T6832 T6831 nummod one,line
R4707 T6833 T6831 compound cell,line
R4708 T6834 T6828 auxpass was,used
R4709 T6835 T6828 prep in,used
R4710 T6836 T6837 amod repeated,experiments
R4711 T6837 T6835 pobj experiments,in
R4712 T6838 T6819 punct ),except
R4713 T6839 T6815 auxpass were,used
R4714 T6840 T6815 punct ", ",used
R4715 T6841 T6815 cc and,used
R4716 T6842 T6843 nsubjpass experiments,repeated
R4717 T6843 T6815 conj repeated,used
R4718 T6844 T6843 auxpass were,repeated
R4719 T6845 T6846 compound 2,6
R4720 T6846 T6848 nummod 6,times
R4721 T6847 T6846 punct –,6
R4722 T6848 T6843 dobj times,repeated
R4723 T6849 T6848 prep per,times
R4724 T6850 T6849 pobj genotype,per
R4725 T6851 T6843 punct .,repeated

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6750 72-86 _FRAGMENT denotes p62 subunit of
T6751 91-96 PR:000008317 denotes TFIIH
T6752 91-96 GO:0005675 denotes TFIIH
T6753 157-162 NCBITaxon:10088 denotes mouse
T6754 163-172 UBERON:0000922 denotes embryonic
T6755 173-184 CL:0000057 denotes fibroblasts
T6756 254-257 PR:000007164 denotes Xpd
R4647 T6751 T6750 _lexicallyChainedTo TFIIH,p62 subunit of

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6758 72-86 _FRAGMENT denotes p62 subunit of
T6759 91-96 PR_EXT:000008317 denotes TFIIH
T6760 91-96 GO:0005675 denotes TFIIH
T6761 157-162 NCBITaxon:10088 denotes mouse
T6762 163-172 UBERON:0000922 denotes embryonic
T6763 173-184 CL:0000057 denotes fibroblasts
T6764 214-218 CL_GO_EXT:cell denotes cell
T6765 229-237 SO_EXT:genotype_or_entity_with_genotype denotes genotype
T6766 254-257 PR_EXT:000007164 denotes Xpd
T6767 265-270 CL_GO_EXT:cell denotes cells
T6768 290-294 CL_GO_EXT:cell denotes cell
T6769 389-397 SO_EXT:genotype_or_entity_with_genotype denotes genotype
T6757 11-20 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labelling
R4648 T6759 T6758 _lexicallyChainedTo TFIIH,p62 subunit of

2_test

Id Subject Object Predicate Lexical cue
17020410-11242112-84795173 136-138 11242112 denotes 16
17020410-12393803-84795174 139-141 12393803 denotes 17
T99220 136-138 11242112 denotes 16
T28976 139-141 12393803 denotes 17