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PMC:1584416 / 23535-24237 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T4057 0-2 IN denotes In
T4058 51-57 VB denotes affect
T4059 3-11 NN denotes contrast
T4060 11-13 , denotes ,
T4061 13-16 DT denotes the
T4062 17-22 NN denotes level
T4063 23-25 IN denotes of
T4064 26-30 NN denotes XPCS
T4065 36-46 NN denotes expression
T4066 31-35 NN denotes mRNA
T4067 47-50 VBD denotes did
T4068 58-61 DT denotes the
T4069 62-69 NN denotes ability
T4070 70-72 IN denotes of
T4071 73-76 DT denotes the
T4072 85-92 NN denotes protein
T4073 77-84 VBN denotes encoded
T4074 93-94 -LRB- denotes (
T4075 94-102 NN denotes XPDG602D
T4076 102-103 -RRB- denotes )
T4077 104-106 TO denotes to
T4078 107-114 VB denotes restore
T4079 115-118 DT denotes the
T4080 128-137 NN denotes phenotype
T4081 119-122 NN denotes TTD
T4082 123-127 NN denotes hair
T4083 138-140 IN denotes to
T4086 148-411 sentence denotes Notably, XpdTTD/ †XPCS animals had a partial TTD hair phenotype, correlating with low levels of Xpd†XPCS expression, whereas XpdTTD/XPCS animals had wt hair, correlating with normal expression levels from the viable XpdXPCS allele (Table 2 and unpublished data).
T4087 149-156 RB denotes Notably
T4088 180-183 VBD denotes had
T4089 156-158 , denotes ,
T4090 158-164 NN denotes XpdTTD
T4091 165-171 NN denotes  †XPCS
T4092 164-165 HYPH denotes /
T4093 172-179 NNS denotes animals
T4094 184-185 DT denotes a
T4095 203-212 NN denotes phenotype
T4096 186-193 JJ denotes partial
T4097 194-197 NN denotes TTD
T4098 198-202 NN denotes hair
T4099 212-214 , denotes ,
T4100 214-225 VBG denotes correlating
T4101 226-230 IN denotes with
T4102 231-234 JJ denotes low
T4103 235-241 NNS denotes levels
T4104 242-244 IN denotes of
T4105 245-253 NN denotes Xpd†XPCS
T4106 254-264 NN denotes expression
T4107 264-266 , denotes ,
T4108 266-273 IN denotes whereas
T4109 294-297 VBD denotes had
T4110 274-280 NN denotes XpdTTD
T4111 281-285 NN denotes XPCS
T4112 280-281 HYPH denotes /
T4113 286-293 NNS denotes animals
T4114 298-300 NN denotes wt
T4115 301-305 NN denotes hair
T4116 305-307 , denotes ,
T4117 307-318 VBG denotes correlating
T4118 319-323 IN denotes with
T4119 324-330 JJ denotes normal
T4120 342-348 NNS denotes levels
T4121 331-341 NN denotes expression
T4122 349-353 IN denotes from
T4123 354-357 DT denotes the
T4124 373-379 NN denotes allele
T4125 358-364 JJ denotes viable
T4126 365-372 NN denotes XpdXPCS
T4127 380-381 -LRB- denotes (
T4128 381-386 NN denotes Table
T4129 387-388 CD denotes 2
T4130 389-392 CC denotes and
T4131 393-404 JJ denotes unpublished
T4132 405-409 NNS denotes data
T4133 409-410 -RRB- denotes )
T4134 410-411 . denotes .
T4135 411-539 sentence denotes Thus, the range of expression levels from these two mutant alleles affected their ability to complement some phenotypes (hair).
T4136 412-416 RB denotes Thus
T4137 479-487 VBD denotes affected
T4138 416-418 , denotes ,
T4139 418-421 DT denotes the
T4140 422-427 NN denotes range
T4141 428-430 IN denotes of
T4142 431-441 NN denotes expression
T4143 442-448 NNS denotes levels
T4144 449-453 IN denotes from
T4145 454-459 DT denotes these
T4146 471-478 NNS denotes alleles
T4147 460-463 CD denotes two
T4148 464-470 JJ denotes mutant
T4149 488-493 PRP$ denotes their
T4150 494-501 NN denotes ability
T4151 502-504 TO denotes to
T4152 505-515 VB denotes complement
T4153 516-520 DT denotes some
T4154 521-531 NNS denotes phenotypes
T4155 532-533 -LRB- denotes (
T4156 533-537 NN denotes hair
T4157 537-538 -RRB- denotes )
T4158 538-539 . denotes .
T4159 539-702 sentence denotes An overview of the functional relationships between Xpd alleles, phenotypes, and the presumed underlying TFIIH function in mice and cells is presented in Table 2.
T4160 540-542 DT denotes An
T4161 543-551 NN denotes overview
T4162 681-690 VBN denotes presented
T4163 552-554 IN denotes of
T4164 555-558 DT denotes the
T4165 570-583 NNS denotes relationships
T4166 559-569 JJ denotes functional
T4167 584-591 IN denotes between
T4168 592-595 NN denotes Xpd
T4169 596-603 NNS denotes alleles
T4170 603-605 , denotes ,
T4171 605-615 NNS denotes phenotypes
T4172 615-617 , denotes ,
T4173 617-620 CC denotes and
T4174 621-624 DT denotes the
T4175 651-659 NN denotes function
T4176 625-633 VBN denotes presumed
T4177 634-644 VBG denotes underlying
T4178 645-650 NN denotes TFIIH
T4179 660-662 IN denotes in
T4180 663-667 NNS denotes mice
T4181 668-671 CC denotes and
T4182 672-677 NNS denotes cells
T4183 678-680 VBZ denotes is
T4184 691-693 IN denotes in
T4185 694-699 NN denotes Table
T4186 700-701 CD denotes 2
T4187 701-702 . denotes .
T4084 141-147 JJ denotes normal
T4085 147-148 . denotes .
R2753 T4057 T4058 prep In,affect
R2754 T4059 T4057 pobj contrast,In
R2755 T4060 T4058 punct ", ",affect
R2756 T4061 T4062 det the,level
R2757 T4062 T4058 nsubj level,affect
R2758 T4063 T4062 prep of,level
R2759 T4064 T4065 compound XPCS,expression
R2760 T4065 T4063 pobj expression,of
R2761 T4066 T4065 compound mRNA,expression
R2762 T4067 T4058 aux did,affect
R2763 T4068 T4069 det the,ability
R2764 T4069 T4058 dobj ability,affect
R2765 T4070 T4069 prep of,ability
R2766 T4071 T4072 det the,protein
R2767 T4072 T4070 pobj protein,of
R2768 T4073 T4072 amod encoded,protein
R2769 T4074 T4072 punct (,protein
R2770 T4075 T4072 appos XPDG602D,protein
R2771 T4076 T4069 punct ),ability
R2772 T4077 T4078 aux to,restore
R2773 T4078 T4069 acl restore,ability
R2774 T4079 T4080 det the,phenotype
R2775 T4080 T4078 dobj phenotype,restore
R2776 T4081 T4080 compound TTD,phenotype
R2777 T4082 T4080 compound hair,phenotype
R2778 T4083 T4078 prep to,restore
R2779 T4084 T4083 amod normal,to
R2780 T4085 T4058 punct .,affect
R2781 T4087 T4088 advmod Notably,had
R2782 T4089 T4088 punct ", ",had
R2783 T4090 T4091 compound XpdTTD, †XPCS
R2784 T4091 T4093 compound  †XPCS,animals
R2785 T4092 T4091 punct /, †XPCS
R2786 T4093 T4088 nsubj animals,had
R2787 T4094 T4095 det a,phenotype
R2788 T4095 T4088 dobj phenotype,had
R2789 T4096 T4095 amod partial,phenotype
R2790 T4097 T4095 compound TTD,phenotype
R2791 T4098 T4095 compound hair,phenotype
R2792 T4099 T4095 punct ", ",phenotype
R2793 T4100 T4095 acl correlating,phenotype
R2794 T4101 T4100 prep with,correlating
R2795 T4102 T4103 amod low,levels
R2796 T4103 T4101 pobj levels,with
R2797 T4104 T4103 prep of,levels
R2798 T4105 T4106 compound Xpd†XPCS,expression
R2799 T4106 T4104 pobj expression,of
R2800 T4107 T4088 punct ", ",had
R2801 T4108 T4109 mark whereas,had
R2802 T4109 T4088 advcl had,had
R2803 T4110 T4111 compound XpdTTD,XPCS
R2804 T4111 T4113 compound XPCS,animals
R2805 T4112 T4111 punct /,XPCS
R2806 T4113 T4109 nsubj animals,had
R2807 T4114 T4115 compound wt,hair
R2808 T4115 T4109 dobj hair,had
R2809 T4116 T4115 punct ", ",hair
R2810 T4117 T4115 acl correlating,hair
R2811 T4118 T4117 prep with,correlating
R2827 T4134 T4088 punct .,had
R2828 T4136 T4137 advmod Thus,affected
R2829 T4138 T4137 punct ", ",affected
R2830 T4139 T4140 det the,range
R2831 T4140 T4137 nsubj range,affected
R2832 T4141 T4140 prep of,range
R2833 T4142 T4143 compound expression,levels
R2834 T4143 T4141 pobj levels,of
R2835 T4144 T4140 prep from,range
R2836 T4145 T4146 det these,alleles
R2837 T4146 T4144 pobj alleles,from
R2838 T4147 T4146 nummod two,alleles
R2839 T4148 T4146 amod mutant,alleles
R2840 T4149 T4150 poss their,ability
R2841 T4150 T4137 dobj ability,affected
R2842 T4151 T4152 aux to,complement
R2843 T4152 T4150 acl complement,ability
R2844 T4153 T4154 det some,phenotypes
R2845 T4154 T4152 dobj phenotypes,complement
R2846 T4155 T4156 punct (,hair
R2847 T4156 T4154 parataxis hair,phenotypes
R2848 T4157 T4156 punct ),hair
R2849 T4158 T4137 punct .,affected
R2850 T4160 T4161 det An,overview
R2851 T4161 T4162 nsubjpass overview,presented
R2852 T4163 T4161 prep of,overview
R2853 T4164 T4165 det the,relationships
R2854 T4165 T4163 pobj relationships,of
R2855 T4166 T4165 amod functional,relationships
R2856 T4167 T4165 prep between,relationships
R2857 T4168 T4169 compound Xpd,alleles
R2858 T4169 T4167 pobj alleles,between
R2859 T4170 T4169 punct ", ",alleles
R2860 T4171 T4169 conj phenotypes,alleles
R2861 T4172 T4171 punct ", ",phenotypes
R2862 T4173 T4171 cc and,phenotypes
R2863 T4174 T4175 det the,function
R2864 T4175 T4171 conj function,phenotypes
R2865 T4176 T4175 amod presumed,function
R2866 T4177 T4175 amod underlying,function
R2867 T4178 T4175 compound TFIIH,function
R2868 T4179 T4165 prep in,relationships
R2869 T4180 T4179 pobj mice,in
R2870 T4181 T4180 cc and,mice
R2871 T4182 T4180 conj cells,mice
R2872 T4183 T4162 auxpass is,presented
R2873 T4184 T4162 prep in,presented
R2874 T4185 T4184 pobj Table,in
R2875 T4186 T4185 nummod 2,Table
R2876 T4187 T4162 punct .,presented
R2812 T4119 T4120 amod normal,levels
R2813 T4120 T4118 pobj levels,with
R2814 T4121 T4120 compound expression,levels
R2815 T4122 T4120 prep from,levels
R2816 T4123 T4124 det the,allele
R2817 T4124 T4122 pobj allele,from
R2818 T4125 T4124 amod viable,allele
R2819 T4126 T4124 compound XpdXPCS,allele
R2820 T4127 T4128 punct (,Table
R2821 T4128 T4088 parataxis Table,had
R2822 T4129 T4128 nummod 2,Table
R2823 T4130 T4128 cc and,Table
R2824 T4131 T4132 amod unpublished,data
R2825 T4132 T4128 conj data,Table
R2826 T4133 T4128 punct ),Table

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3146 36-46 GO:0010467 denotes expression
T3147 94-97 PR:000007164 denotes XPD
T3148 123-127 UBERON:0001037 denotes hair
T3149 158-161 PR:000007164 denotes Xpd
T3150 172-179 NCBITaxon:33208 denotes animals
T3151 198-202 UBERON:0001037 denotes hair
T3152 245-248 PR:000007164 denotes Xpd
T3153 254-264 GO:0010467 denotes expression
T3154 274-277 PR:000007164 denotes Xpd
T3155 286-293 NCBITaxon:33208 denotes animals
T3156 301-305 UBERON:0001037 denotes hair
T3157 331-341 GO:0010467 denotes expression
T3158 365-368 PR:000007164 denotes Xpd
T3159 373-379 SO:0001023 denotes allele
T3160 431-441 GO:0010467 denotes expression
T3161 471-478 SO:0001023 denotes alleles
T3162 533-537 UBERON:0001037 denotes hair
T3163 592-595 PR:000007164 denotes Xpd
T3164 596-603 SO:0001023 denotes alleles
T3165 645-650 GO:0005675 denotes TFIIH
T3166 663-667 NCBITaxon:10088 denotes mice

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3285 31-35 CHEBI_SO_EXT:mRNA denotes mRNA
T3286 36-46 GO:0010467 denotes expression
T3287 77-84 SO_EXT:sequence_coding_function denotes encoded
T3288 85-92 CHEBI_PR_EXT:protein denotes protein
T3289 94-97 PR_EXT:000007164 denotes XPD
T3290 123-127 UBERON:0001037 denotes hair
T3291 158-161 PR_EXT:000007164 denotes Xpd
T3292 172-179 NCBITaxon:33208 denotes animals
T3293 198-202 UBERON:0001037 denotes hair
T3294 245-248 PR_EXT:000007164 denotes Xpd
T3295 254-264 GO:0010467 denotes expression
T3296 274-277 PR_EXT:000007164 denotes Xpd
T3297 286-293 NCBITaxon:33208 denotes animals
T3298 298-300 SO_EXT:wild_type_entity_or_quality denotes wt
T3299 301-305 UBERON:0001037 denotes hair
T3300 331-341 GO:0010467 denotes expression
T3301 365-368 PR_EXT:000007164 denotes Xpd
T3302 373-379 SO_EXT:0001023 denotes allele
T3303 431-441 GO:0010467 denotes expression
T3304 464-470 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T3305 471-478 SO_EXT:0001023 denotes alleles
T3306 533-537 UBERON:0001037 denotes hair
T3307 592-595 PR_EXT:000007164 denotes Xpd
T3308 596-603 SO_EXT:0001023 denotes alleles
T3309 645-650 GO:0005675 denotes TFIIH
T3310 663-667 NCBITaxon:10088 denotes mice
T3311 672-677 CL_GO_EXT:cell denotes cells