PMC:1564426 / 20242-20927 JSONTXT

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    craft-ca-core-ex-dev

    {"project":"craft-ca-core-ex-dev","denotations":[{"id":"T9575","span":{"begin":1,"end":4},"obj":"PR_EXT:000004122"},{"id":"T9576","span":{"begin":5,"end":16},"obj":"SO_EXT:0000673"},{"id":"T9577","span":{"begin":39,"end":41},"obj":"GO_EXT:reverse_transcription_or_reverse_transcriptase"},{"id":"T9578","span":{"begin":51,"end":58},"obj":"SO_EXT:0000112"},{"id":"T9579","span":{"begin":68,"end":72},"obj":"SO_EXT:0000147"},{"id":"T9580","span":{"begin":100,"end":103},"obj":"CHEBI_SO_EXT:RNA"},{"id":"T9581","span":{"begin":136,"end":142},"obj":"UBERON:0000479"},{"id":"T9582","span":{"begin":177,"end":179},"obj":"GO_EXT:reverse_transcription_or_reverse_transcriptase"},{"id":"T9583","span":{"begin":180,"end":191},"obj":"SO_EXT:0000006"},{"id":"T9584","span":{"begin":197,"end":199},"obj":"SO_EXT:0000028"},{"id":"T9585","span":{"begin":210,"end":219},"obj":"SO_EXT:sequence_truncation_process"},{"id":"T9586","span":{"begin":220,"end":223},"obj":"PR_EXT:000004122"},{"id":"T9587","span":{"begin":225,"end":228},"obj":"PR_EXT:000004122"},{"id":"T9588","span":{"begin":234,"end":240},"obj":"SO_EXT:0001023"},{"id":"T9589","span":{"begin":253,"end":260},"obj":"UBERON:0000479"},{"id":"T9590","span":{"begin":271,"end":282},"obj":"GO_EXT:recombinase"},{"id":"T9591","span":{"begin":298,"end":307},"obj":"GO:0010467"},{"id":"T9592","span":{"begin":315,"end":318},"obj":"PR_EXT:000009454"},{"id":"T9593","span":{"begin":332,"end":336},"obj":"NCBITaxon:10088"},{"id":"T9594","span":{"begin":391,"end":394},"obj":"PR_EXT:000009454"},{"id":"T9595","span":{"begin":408,"end":413},"obj":"NCBITaxon:10088"},{"id":"T9596","span":{"begin":414,"end":421},"obj":"UBERON:0000479"},{"id":"T9597","span":{"begin":437,"end":442},"obj":"UBERON:0002107"},{"id":"T9598","span":{"begin":446,"end":449},"obj":"PR_EXT:000009454"},{"id":"T9599","span":{"begin":463,"end":467},"obj":"NCBITaxon:10088"},{"id":"T9600","span":{"begin":499,"end":508},"obj":"SO_EXT:wild_type_entity_or_quality"},{"id":"T9601","span":{"begin":509,"end":515},"obj":"SO_EXT:0001023"},{"id":"T9602","span":{"begin":521,"end":523},"obj":"SO_EXT:0000028"},{"id":"T9603","span":{"begin":549,"end":552},"obj":"CHEBI_SO_EXT:RNA"},{"id":"T9604","span":{"begin":599,"end":612},"obj":"GO_SO_EXT:sequence_rearrangement_process"},{"id":"T9605","span":{"begin":636,"end":642},"obj":"UBERON:0000479"},{"id":"T9606","span":{"begin":648,"end":656},"obj":"SO_EXT:genotype_or_entity_with_genotype"}],"text":" Apc transcripts were also analyzed by RT-PCR with primers spanning exon 14 (Figure 1A) using total RNA isolated from the corresponding tissue samples. We detected the expected RT-PCR product (313 bp) from the truncated Apc (ApcΔ580) allele only in the tissues where Cre recombinase is known to be expressed in the K14-cre–positive mice. However, this product was not detected in either the K14-cre–negative mouse tissues samples or the liver of K14-cre–positive mice, and only the product from the wild-type allele (528 bp) was detected from these RNA samples, further confirming that Cre-mediated recombination has taken place in the tissue- and genotype-specific manner (Figure 3B)."}

    craft-ca-core-dev

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    craft-sa-dev

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Apc transcripts were also analyzed by RT-PCR with primers spanning exon 14 (Figure 1A) using total RNA isolated from the corresponding tissue samples. We detected the expected RT-PCR product (313 bp) from the truncated Apc (ApcΔ580) allele only in the tissues where Cre recombinase is known to be expressed in the K14-cre–positive mice. However, this product was not detected in either the K14-cre–negative mouse tissues samples or the liver of K14-cre–positive mice, and only the product from the wild-type allele (528 bp) was detected from these RNA samples, further confirming that Cre-mediated recombination has taken place in the tissue- and genotype-specific manner (Figure 3B)."}