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PMC:1540739 / 1629-2219 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T2663 9-16 NN denotes setting
T2664 1-8 JJ denotes genomic
T2665 17-20 CC denotes and
T2666 21-30 VBN denotes expressed
T2667 31-35 IN denotes from
T2668 36-39 DT denotes the
T2669 51-59 NN denotes promoter
T2670 40-50 JJ denotes endogenous
T2671 59-61 , denotes ,
T2672 61-69 VBG denotes ensuring
T2673 70-83 JJ denotes physiological
T2674 95-101 NNS denotes levels
T2675 84-94 NN denotes expression
T2676 102-105 CC denotes and
T2677 106-113 JJ denotes correct
T2678 130-138 NNS denotes profiles
T2679 114-120 JJ denotes spatio
T2680 121-129 JJ denotes temporal
T2681 120-121 HYPH denotes -
T2682 138-139 . denotes .
T2683 139-405 sentence denotes As significant differences between phenotypes from targeted p53 mutants in vivo and transfection data were observed [e.g. Refs (1–5)], more targeted mutations need to be generated and analyzed in multiple tissues to formulate more accurate models of p53 regulation.
T2684 140-142 IN denotes As
T2685 247-255 VBN denotes observed
T2686 143-154 JJ denotes significant
T2687 155-166 NNS denotes differences
T2688 167-174 IN denotes between
T2689 175-185 NNS denotes phenotypes
T2690 186-190 IN denotes from
T2691 191-199 VBN denotes targeted
T2692 204-211 NNS denotes mutants
T2693 200-203 NN denotes p53
T2694 212-214 FW denotes in
T2695 215-219 FW denotes vivo
T2696 220-223 CC denotes and
T2697 224-236 NN denotes transfection
T2698 237-241 NNS denotes data
T2699 242-246 VBD denotes were
T2700 299-303 VBP denotes need
T2701 256-257 -LRB- denotes [
T2702 268-269 CD denotes 1
T2703 257-261 FW denotes e.g.
T2704 262-266 NNS denotes Refs
T2705 267-268 -LRB- denotes (
T2706 269-270 SYM denotes –
T2707 270-271 CD denotes 5
T2708 271-272 -RRB- denotes )
T2709 272-273 -RRB- denotes ]
T2710 273-275 , denotes ,
T2711 275-279 RBR denotes more
T2712 280-288 VBN denotes targeted
T2713 289-298 NNS denotes mutations
T2714 304-306 TO denotes to
T2715 310-319 VBN denotes generated
T2716 307-309 VB denotes be
T2717 320-323 CC denotes and
T2718 324-332 VBN denotes analyzed
T2719 333-335 IN denotes in
T2720 336-344 JJ denotes multiple
T2721 345-352 NNS denotes tissues
T2722 353-355 TO denotes to
T2723 356-365 VB denotes formulate
T2724 366-370 RBR denotes more
T2725 371-379 JJ denotes accurate
T2726 380-386 NNS denotes models
T2727 387-389 IN denotes of
T2728 390-393 NN denotes p53
T2729 394-404 NN denotes regulation
T2730 404-405 . denotes .
T2732 406-413 RB denotes However
T2733 482-484 VBZ denotes is
T2734 413-415 , denotes ,
T2735 415-420 VBG denotes using
T2736 421-431 JJ denotes homologous
T2737 432-445 NN denotes recombination
T2738 446-448 IN denotes in
T2739 449-451 NN denotes ES
T2740 452-457 NNS denotes cells
T2741 458-460 TO denotes to
T2742 461-469 VB denotes generate
T2743 470-476 JJ denotes mutant
T2744 477-481 NNS denotes mice
T2745 485-487 DT denotes an
T2746 520-526 NN denotes method
T2747 488-499 JJ denotes inefficient
T2748 499-501 , denotes ,
T2749 501-505 JJ denotes slow
T2750 506-509 CC denotes and
T2751 510-519 JJ denotes expensive
T2752 527-534 IN denotes because
T2753 574-580 VBZ denotes occurs
T2754 535-536 -LRB- denotes (
T2755 536-537 LS denotes i
T2756 537-538 -RRB- denotes )
T2757 539-549 JJ denotes homologous
T2758 550-563 NN denotes recombination
T2759 564-573 RB denotes typically
T2760 581-583 IN denotes at
T2761 584-587 JJ denotes low
R262 T2695 T2690 advmod vivo,from
R264 T2696 T2689 cc and,phenotypes
R266 T2697 T2698 compound transfection,data
R267 T2698 T2689 conj data,phenotypes
R269 T2699 T2685 auxpass were,observed
R271 T2701 T2702 punct [,1
R272 T2702 T2685 parataxis 1,observed
R273 T2703 T2702 advmod e.g.,1
R275 T2704 T2702 nmod Refs,1
R276 T2705 T2702 punct (,1
R278 T2706 T2707 punct –,5
R279 T2707 T2702 prep 5,1
R280 T2708 T2702 punct ),1
R282 T2709 T2702 punct ],1
R284 T2710 T2700 punct ", ",need
R286 T2711 T2712 advmod more,targeted
R287 T2712 T2713 amod targeted,mutations
R289 T2713 T2700 nsubj mutations,need
R290 T2714 T2715 aux to,generated
R291 T2715 T2700 xcomp generated,need
R292 T2716 T2715 auxpass be,generated
R294 T2717 T2715 cc and,generated
R295 T2718 T2715 conj analyzed,generated
R297 T2719 T2718 prep in,analyzed
R298 T2720 T2721 amod multiple,tissues
R299 T2721 T2719 pobj tissues,in
R300 T2722 T2723 aux to,formulate
R301 T2723 T2718 advcl formulate,analyzed
R302 T2724 T2725 advmod more,accurate
R304 T2725 T2726 amod accurate,models
R306 T2726 T2723 dobj models,formulate
R307 T2727 T2726 prep of,models
R308 T2728 T2729 compound p53,regulation
R309 T2729 T2727 pobj regulation,of
R310 T2730 T2700 punct .,need
R312 T2732 T2733 advmod However,is
R314 T2734 T2733 punct ", ",is
R315 T2735 T2733 csubj using,is
R317 T2736 T2737 amod homologous,recombination
R319 T2737 T2735 dobj recombination,using
R320 T2738 T2735 prep in,using
R322 T2739 T2740 compound ES,cells
R323 T2740 T2738 pobj cells,in
R324 T2741 T2742 aux to,generate
R326 T2742 T2735 advcl generate,using
R327 T2743 T2744 amod mutant,mice
R328 T2744 T2742 dobj mice,generate
R329 T2745 T2746 det an,method
R331 T2746 T2733 attr method,is
R332 T2747 T2746 amod inefficient,method
R333 T2748 T2747 punct ", ",inefficient
R335 T2749 T2747 conj slow,inefficient
R336 T2750 T2749 cc and,slow
R338 T2751 T2749 conj expensive,slow
R339 T2752 T2753 mark because,occurs
R340 T2753 T2733 advcl occurs,is
R342 T2754 T2755 punct (,i
R343 T2755 T2753 meta i,occurs
R344 T2756 T2755 punct ),i
R345 T2757 T2758 amod homologous,recombination
R347 T2758 T2753 nsubj recombination,occurs
R348 T2759 T2753 advmod typically,occurs
R349 T2760 T2753 prep at,occurs
R365 T2664 T2663 amod genomic,setting
R376 T2667 T2666 prep from,expressed
R380 T2668 T2669 det the,promoter
R382 T2669 T2667 pobj promoter,from
R385 T2670 T2669 amod endogenous,promoter
R398 T2673 T2674 amod physiological,levels
R401 T2674 T2672 dobj levels,ensuring
R404 T2675 T2674 compound expression,levels
R405 T2676 T2674 cc and,levels
R407 T2677 T2678 amod correct,profiles
R410 T2678 T2674 conj profiles,levels
R414 T2679 T2680 amod spatio,temporal
R417 T2680 T2678 amod temporal,profiles
R421 T2681 T2680 punct -,temporal
R428 T2684 T2685 mark As,observed
R434 T2685 T2700 advcl observed,need
R438 T2686 T2687 amod significant,differences
R440 T2687 T2685 nsubjpass differences,observed
R443 T2688 T2687 prep between,differences
R447 T2689 T2688 pobj phenotypes,between
R451 T2690 T2689 prep from,phenotypes
R455 T2691 T2692 amod targeted,mutants
R461 T2692 T2690 pobj mutants,from
R463 T2693 T2692 compound p53,mutants
R467 T2694 T2695 advmod in,vivo

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2436 1-8 SO_EXT:0001026 denotes genomic
T2437 21-30 GO:0010467 denotes expressed
T2438 51-59 SO_EXT:0000167 denotes promoter
T2439 70-83 GO_PATO_EXT:physiological_process_or_quality denotes physiological
T2440 84-94 GO:0010467 denotes expression
T2441 200-203 PR_EXT:000003035 denotes p53
T2442 204-211 SO_EXT:sequence_altered_entity denotes mutants
T2443 224-236 GO:0009294 denotes transfection
T2444 289-298 SO_EXT:sequence_alteration_entity_or_process denotes mutations
T2445 390-393 PR_EXT:000003035 denotes p53
T2446 394-404 GO:0065007 denotes regulation
T2447 432-445 GO_SO_EXT:sequence_rearrangement_process denotes recombination
T2448 449-457 CL:0002322 denotes ES cells
T2449 452-457 CL_GO_EXT:cell denotes cells
T2450 470-476 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T2451 477-481 NCBITaxon:10088 denotes mice
T2452 550-563 GO_SO_EXT:sequence_rearrangement_process denotes recombination

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2344 1-8 SO:0001026 denotes genomic
T2345 21-30 GO:0010467 denotes expressed
T2346 51-59 SO:0000167 denotes promoter
T2347 84-94 GO:0010467 denotes expression
T2348 200-203 PR:000003035 denotes p53
T2349 224-236 GO:0009294 denotes transfection
T2350 390-393 PR:000003035 denotes p53
T2351 394-404 GO:0065007 denotes regulation
T2352 449-457 CL:0002322 denotes ES cells
T2353 477-481 NCBITaxon:10088 denotes mice

2_test

Id Subject Object Predicate Lexical cue
16870721-12909629-76660890 268-269 12909629 denotes 1
16870721-15456863-76660890 268-269 15456863 denotes 1
16870721-14729946-76660890 268-269 14729946 denotes 1
16870721-16006521-76660890 268-269 16006521 denotes 1
16870721-16616333-76660890 268-269 16616333 denotes 1