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PMC:1482699 / 34516-35006 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T20781 0-3 NN denotes DNA
T20782 23-31 VBN denotes isolated
T20783 4-7 IN denotes for
T20784 8-18 NN denotes genotyping
T20785 19-22 VBD denotes was
T20786 32-36 IN denotes from
T20787 37-40 CD denotes 1.0
T20788 41-44 CD denotes 2.0
T20789 40-41 SYM denotes –
T20790 45-47 NN denotes mm
T20791 53-58 NNS denotes clips
T20792 48-52 NN denotes tail
T20794 62-71 VBG denotes digesting
T20795 72-76 IN denotes with
T20796 77-87 NN denotes Proteinase
T20797 88-89 NN denotes K
T20798 90-91 -LRB- denotes (
T20799 91-97 NNP denotes Fisher
T20800 97-98 -RRB- denotes )
T20801 99-101 IN denotes at
T20802 102-104 CD denotes 55
T20803 104-106 NN denotes °C
T20804 107-109 IN denotes in
T20805 110-111 DT denotes a
T20806 112-118 NN denotes buffer
T20807 119-127 VBN denotes composed
T20808 128-130 IN denotes of
T20809 131-135 CD denotes 0.45
T20810 135-136 NN denotes %
T20811 137-141 NN denotes NP40
T20812 142-143 -LRB- denotes (
T20813 143-148 NNP denotes Sigma
T20814 148-149 -RRB- denotes )
T20815 149-151 , denotes ,
T20816 151-155 CD denotes 0.45
T20817 155-156 NN denotes %
T20818 157-162 NN denotes Tween
T20819 163-165 CD denotes 20
T20820 166-167 -LRB- denotes (
T20821 167-173 NNP denotes Fisher
T20822 173-174 -RRB- denotes )
T20823 175-178 CC denotes and
T20824 179-181 NN denotes 1X
T20825 186-192 NN denotes buffer
T20826 182-185 NN denotes PCR
T20827 193-194 -LRB- denotes (
T20828 194-201 NNP denotes Promega
T20829 201-202 -RRB- denotes )
T20830 202-203 . denotes .
T20831 203-321 sentence denotes The product of this digestion was diluted (1:10) in sterile H2O and used for genotyping without further purification.
T20832 204-207 DT denotes The
T20833 208-215 NN denotes product
T20834 238-245 VBN denotes diluted
T20835 216-218 IN denotes of
T20836 219-223 DT denotes this
T20837 224-233 NN denotes digestion
T20838 234-237 VBD denotes was
T20839 246-247 -LRB- denotes (
T20840 247-248 CD denotes 1
T20841 248-249 SYM denotes :
T20842 249-251 CD denotes 10
T20843 251-252 -RRB- denotes )
T20844 253-255 IN denotes in
T20845 256-263 JJ denotes sterile
T20846 264-267 NN denotes H2O
T20847 268-271 CC denotes and
T20848 272-276 VBN denotes used
T20849 277-280 IN denotes for
T20850 281-291 NN denotes genotyping
T20851 292-299 IN denotes without
T20852 300-307 JJ denotes further
T20853 308-320 NN denotes purification
T20854 320-321 . denotes .
T20855 321-415 sentence denotes Microsatellite genotyping was performed using standard PCR and gel electrophoresis protocols.
T20856 322-336 NN denotes Microsatellite
T20857 337-347 NN denotes genotyping
T20858 352-361 VBN denotes performed
T20859 348-351 VBD denotes was
T20860 362-367 VBG denotes using
T20861 368-376 JJ denotes standard
T20862 405-414 NNS denotes protocols
T20863 377-380 NN denotes PCR
T20864 381-384 CC denotes and
T20865 385-388 NN denotes gel
T20866 389-404 NN denotes electrophoresis
T20867 414-415 . denotes .
T20868 415-490 sentence denotes Reaction conditions for each marker are listed in Additional File 1 and 2.
T20869 416-424 NN denotes Reaction
T20870 425-435 NNS denotes conditions
T20871 456-462 VBN denotes listed
T20872 436-439 IN denotes for
T20873 440-444 DT denotes each
T20874 445-451 NN denotes marker
T20875 452-455 VBP denotes are
T20876 463-465 IN denotes in
T20877 466-476 JJ denotes Additional
T20878 482-483 CD denotes 1
T20879 477-481 NN denotes File
T20880 484-487 CC denotes and
T20881 488-489 CD denotes 2
T20882 489-490 . denotes .
T20793 59-61 IN denotes by
R6392 T20781 T20782 nsubjpass DNA,isolated
R6393 T20783 T20781 prep for,DNA
R6394 T20784 T20783 pobj genotyping,for
R6395 T20785 T20782 auxpass was,isolated
R6396 T20786 T20782 prep from,isolated
R6397 T20787 T20788 quantmod 1.0,2.0
R6398 T20788 T20790 nummod 2.0,mm
R6399 T20789 T20788 punct –,2.0
R6400 T20790 T20791 compound mm,clips
R6401 T20791 T20786 pobj clips,from
R6402 T20792 T20791 compound tail,clips
R6403 T20793 T20782 prep by,isolated
R6404 T20794 T20793 pcomp digesting,by
R6405 T20795 T20794 prep with,digesting
R6406 T20796 T20797 compound Proteinase,K
R6407 T20797 T20795 pobj K,with
R6408 T20798 T20799 punct (,Fisher
R6409 T20799 T20797 parataxis Fisher,K
R6410 T20800 T20799 punct ),Fisher
R6411 T20801 T20794 prep at,digesting
R6412 T20802 T20803 nummod 55,°C
R6413 T20803 T20801 pobj °C,at
R6414 T20804 T20794 prep in,digesting
R6415 T20805 T20806 det a,buffer
R6416 T20806 T20804 pobj buffer,in
R6417 T20807 T20806 acl composed,buffer
R6418 T20808 T20807 prep of,composed
R6419 T20809 T20810 nummod 0.45,%
R6420 T20810 T20811 compound %,NP40
R6421 T20811 T20808 pobj NP40,of
R6422 T20812 T20813 punct (,Sigma
R6423 T20813 T20811 parataxis Sigma,NP40
R6424 T20814 T20813 punct ),Sigma
R6425 T20815 T20811 punct ", ",NP40
R6426 T20816 T20817 nummod 0.45,%
R6427 T20817 T20818 compound %,Tween
R6428 T20818 T20811 conj Tween,NP40
R6429 T20819 T20818 nummod 20,Tween
R6430 T20820 T20821 punct (,Fisher
R6431 T20821 T20818 parataxis Fisher,Tween
R6432 T20822 T20821 punct ),Fisher
R6433 T20823 T20818 cc and,Tween
R6434 T20824 T20825 compound 1X,buffer
R6435 T20825 T20818 conj buffer,Tween
R6436 T20826 T20825 compound PCR,buffer
R6437 T20827 T20828 punct (,Promega
R6438 T20828 T20825 parataxis Promega,buffer
R6439 T20829 T20828 punct ),Promega
R6440 T20830 T20782 punct .,isolated
R6441 T20832 T20833 det The,product
R6442 T20833 T20834 nsubjpass product,diluted
R6443 T20835 T20833 prep of,product
R6444 T20836 T20837 det this,digestion
R6445 T20837 T20835 pobj digestion,of
R6446 T20838 T20834 auxpass was,diluted
R6447 T20839 T20840 punct (,1
R6448 T20840 T20834 parataxis 1,diluted
R6449 T20841 T20842 punct :,10
R6450 T20842 T20840 prep 10,1
R6451 T20843 T20840 punct ),1
R6452 T20844 T20834 prep in,diluted
R6453 T20845 T20846 amod sterile,H2O
R6454 T20846 T20844 pobj H2O,in
R6455 T20847 T20834 cc and,diluted
R6456 T20848 T20834 conj used,diluted
R6457 T20849 T20848 prep for,used
R6458 T20850 T20849 pobj genotyping,for
R6459 T20851 T20848 prep without,used
R6460 T20852 T20853 amod further,purification
R6461 T20853 T20851 pobj purification,without
R6462 T20854 T20834 punct .,diluted
R6463 T20856 T20857 compound Microsatellite,genotyping
R6464 T20857 T20858 nsubjpass genotyping,performed
R6465 T20859 T20858 auxpass was,performed
R6466 T20860 T20858 advcl using,performed
R6467 T20861 T20862 amod standard,protocols
R6468 T20862 T20860 dobj protocols,using
R6469 T20863 T20862 nmod PCR,protocols
R6470 T20864 T20863 cc and,PCR
R6471 T20865 T20866 compound gel,electrophoresis
R6472 T20866 T20863 conj electrophoresis,PCR
R6473 T20867 T20858 punct .,performed
R6474 T20869 T20870 compound Reaction,conditions
R6475 T20870 T20871 nsubjpass conditions,listed
R6476 T20872 T20870 prep for,conditions
R6477 T20873 T20874 det each,marker
R6478 T20874 T20872 pobj marker,for
R6479 T20875 T20871 auxpass are,listed
R6480 T20876 T20871 prep in,listed
R6481 T20877 T20878 amod Additional,1
R6482 T20878 T20876 pobj 1,in
R6483 T20879 T20878 nmod File,1
R6484 T20880 T20878 cc and,1
R6485 T20881 T20878 conj 2,1
R6486 T20882 T20871 punct .,listed

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T20749 0-3 CHEBI_SO_EXT:DNA denotes DNA
T20750 48-52 UBERON:0002415 denotes tail
T20751 77-87 GO_EXT:0008233 denotes Proteinase
T20752 112-118 CHEBI_CHMO_EXT:buffer_solution denotes buffer
T20753 137-141 CHEBI:63016 denotes NP40
T20754 157-165 CHEBI:53424 denotes Tween 20
T20755 186-192 CHEBI_CHMO_EXT:buffer_solution denotes buffer
T20756 264-267 CHEBI:15377 denotes H2O
T20757 322-336 SO_EXT:microsatellite_unit_or_region denotes Microsatellite
T20758 445-451 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T20731 48-52 UBERON:0002415 denotes tail
T20732 137-141 CHEBI:63016 denotes NP40
T20733 157-165 CHEBI:53424 denotes Tween 20
T20734 264-267 CHEBI:15377 denotes H2O