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PMC:1472690 / 33685-34131 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T17769 432-444 NN denotes BioWhittaker
T17768 431-432 -LRB- denotes (
T17767 419-430 NN denotes L-glutamine
T17766 416-418 NN denotes mM
T17765 412-415 CD denotes 200
T17764 410-411 NN denotes %
T17763 409-410 CD denotes 1
T17762 405-408 CC denotes and
T17761 403-404 -COMMA- denotes ,
T17760 402-403 -RRB- denotes )
T17759 397-402 NN denotes μg/ml
T17758 391-396 CD denotes 10000
T17757 390-391 -LRB- denotes (
T17756 377-389 NN denotes streptomycin
T17755 375-376 NN denotes %
T17754 374-375 CD denotes 1
T17753 372-373 -COMMA- denotes ,
T17752 371-372 -RRB- denotes )
T17751 367-371 NN denotes U/ml
T17750 361-366 CD denotes 10000
T17749 360-361 -LRB- denotes (
T17748 349-359 NN denotes penicillin
T17747 347-348 NN denotes %
T17746 346-347 CD denotes 1
T17745 344-345 -COMMA- denotes ,
T17744 343-344 -RRB- denotes )
T17743 336-343 NNP denotes Germany
T17742 334-335 -COMMA- denotes ,
T17741 325-334 NNP denotes Karlsruhe
T17740 323-324 -COMMA- denotes ,
T17739 313-323 NNP denotes Invitrogen
T17738 311-312 -COMMA- denotes ,
T17737 304-311 NN denotes low-LPS
T17736 302-303 -COMMA- denotes ,
T17735 299-302 NN denotes FCS
T17734 298-299 -LRB- denotes (
T17733 292-297 NN denotes serum
T17732 287-291 NN denotes calf
T17731 281-286 JJ denotes fetal
T17730 264-280 JJ denotes heat-inactivated
T17729 262-263 NN denotes %
T17728 260-262 CD denotes 10
T17727 249-259 VB denotes containing
T17726 247-248 -COMMA- denotes ,
T17725 246-247 -RRB- denotes )
T17724 238-246 JJ denotes LPS-free
T17723 236-237 -COMMA- denotes ,
T17722 229-236 NNP denotes Germany
T17721 227-228 -COMMA- denotes ,
T17720 217-227 NNP denotes Heidelberg
T17719 215-216 -COMMA- denotes ,
T17718 203-215 NNP denotes BioWhittaker
T17717 202-203 -LRB- denotes (
T17716 195-201 NN denotes medium
T17715 190-194 CD denotes 1640
T17714 185-189 NN denotes RPMI
T17713 182-184 IN denotes in
T17712 180-181 -RRB- denotes )
T17711 171-180 NN denotes cytometry
T17710 166-170 NN denotes flow
T17709 162-165 IN denotes for
T17708 161-162 -LRB- denotes (
T17707 152-160 NN denotes cells/ml
T17706 148-151 CD denotes 106
T17705 146-147 CC denotes ×
T17704 144-145 CD denotes 1
T17703 141-143 CC denotes or
T17702 139-140 -RRB- denotes )
T17701 133-139 NN denotes shifts
T17700 129-132 NN denotes gel
T17699 125-128 IN denotes for
T17698 124-125 -LRB- denotes (
T17697 117-123 NN denotes 106/ml
T17696 115-116 CC denotes ×
T17695 113-114 CD denotes 5
T17694 110-112 CC denotes or
T17693 108-109 -RRB- denotes )
T17692 96-108 NN denotes measurements
T17691 90-95 NN denotes ELISA
T17690 86-89 IN denotes for
T17689 85-86 -LRB- denotes (
T17688 76-84 NN denotes cells/ml
T17687 72-75 CD denotes 106
T17686 70-71 -COLON- denotes ×
T17685 68-69 CD denotes 3
T17684 65-67 IN denotes of
T17683 51-64 NN denotes concentration
T17682 45-50 JJ denotes final
T17681 43-44 DT denotes a
T17680 40-42 IN denotes at
T17679 31-39 VB denotes cultured
T17678 26-30 VB denotes were
T17677 21-25 NN denotes PBMC
T17676 19-20 -COMMA- denotes ,
T17675 10-19 NN denotes isolation
T17674 0-9 VB denotes Following
T17770 444-445 -RRB- denotes )
R11964 T17675 T17674 arg2Of isolation,Following
R11965 T17677 T17678 arg1Of PBMC,were
R11966 T17677 T17679 arg2Of PBMC,cultured
R11967 T17679 T17674 arg1Of cultured,Following
R11968 T17679 T17676 arg1Of cultured,","
R11969 T17679 T17678 arg2Of cultured,were
R11970 T17679 T17680 arg1Of cultured,at
R11971 T17683 T17680 arg2Of concentration,at
R11972 T17683 T17681 arg1Of concentration,a
R11973 T17683 T17682 arg1Of concentration,final
R11974 T17683 T17684 arg1Of concentration,of
R11975 T17685 T17684 arg2Of 3,of
R11976 T17688 T17687 arg1Of cells/ml,106
R11977 T17688 T17689 arg1Of cells/ml,(
R11978 T17688 T17694 arg1Of cells/ml,or
R11979 T17690 T17689 arg2Of for,(
R11980 T17692 T17690 arg2Of measurements,for
R11981 T17692 T17691 arg1Of measurements,ELISA
R11982 T17693 T17689 arg3Of ),(
R11983 T17694 T17703 arg1Of or,or
R11984 T17695 T17696 arg1Of 5,×
R11985 T17696 T17694 arg2Of ×,or
R11986 T17696 T17698 arg1Of ×,(
R11987 T17697 T17696 arg2Of 106/ml,×
R11988 T17699 T17698 arg2Of for,(
R11989 T17701 T17699 arg2Of shifts,for
R11990 T17701 T17700 arg1Of shifts,gel
R11991 T17702 T17698 arg3Of ),(
R11992 T17703 T17680 arg3Of or,at
R11993 T17703 T17686 arg1Of or,×
R11994 T17704 T17705 arg1Of 1,×
R11995 T17706 T17705 arg2Of 106,×
R11996 T17707 T17704 arg1Of cells/ml,1
R11997 T17707 T17706 arg1Of cells/ml,106
R11998 T17707 T17708 arg1Of cells/ml,(
R11999 T17707 T17713 arg1Of cells/ml,in
R12000 T17707 T17726 arg1Of cells/ml,","
R12001 T17707 T17727 arg1Of cells/ml,containing
R12002 T17707 T17734 arg1Of cells/ml,(
R12003 T17707 T17745 arg1Of cells/ml,","
R12004 T17709 T17708 arg2Of for,(
R12005 T17711 T17709 arg2Of cytometry,for
R12006 T17711 T17710 arg1Of cytometry,flow
R12007 T17712 T17708 arg3Of ),(
R12008 T17716 T17713 arg2Of medium,in
R12009 T17716 T17714 arg1Of medium,RPMI
R12010 T17716 T17715 arg1Of medium,1640
R12011 T17716 T17717 arg1Of medium,(
R12012 T17718 T17719 arg1Of BioWhittaker,","
R12013 T17719 T17721 arg1Of ",",","
R12014 T17720 T17719 arg2Of Heidelberg,","
R12015 T17721 T17717 arg2Of ",",(
R12016 T17721 T17723 arg1Of ",",","
R12017 T17721 T17724 arg1Of ",",LPS-free
R12018 T17722 T17721 arg2Of Germany,","
R12019 T17725 T17717 arg3Of ),(
R12020 T17728 T17729 arg1Of 10,%
R12021 T17733 T17727 arg2Of serum,containing
R12022 T17733 T17728 arg1Of serum,10
R12023 T17733 T17730 arg1Of serum,heat-inactivated
R12024 T17733 T17731 arg1Of serum,fetal
R12025 T17733 T17732 arg1Of serum,calf
R12026 T17735 T17736 arg1Of FCS,","
R12027 T17735 T17738 arg1Of FCS,","
R12028 T17735 T17740 arg1Of FCS,","
R12029 T17737 T17736 arg2Of low-LPS,","
R12030 T17739 T17738 arg2Of Invitrogen,","
R12031 T17740 T17734 arg2Of ",",(
R12032 T17741 T17740 arg2Of Karlsruhe,","
R12033 T17741 T17742 arg1Of Karlsruhe,","
R12034 T17743 T17742 arg2Of Germany,","
R12035 T17744 T17734 arg3Of ),(
R12036 T17745 T17753 arg1Of ",",","
R12037 T17746 T17747 arg1Of 1,%
R12038 T17748 T17745 arg2Of penicillin,","
R12039 T17748 T17746 arg1Of penicillin,1
R12040 T17748 T17749 arg1Of penicillin,(
R12041 T17751 T17749 arg2Of U/ml,(
R12042 T17751 T17750 arg1Of U/ml,10000
R12043 T17752 T17749 arg3Of ),(
R12044 T17753 T17762 arg1Of ",",and
R12045 T17754 T17755 arg1Of 1,%
R12046 T17756 T17753 arg2Of streptomycin,","
R12047 T17756 T17754 arg1Of streptomycin,1
R12048 T17756 T17757 arg1Of streptomycin,(
R12049 T17759 T17757 arg2Of μg/ml,(
R12050 T17759 T17758 arg1Of μg/ml,10000
R12051 T17760 T17757 arg3Of ),(
R12052 T17762 T17703 arg2Of and,or
R12053 T17762 T17761 arg1Of and,","
R12054 T17765 T17766 arg1Of 200,mM
R12055 T17767 T17762 arg2Of L-glutamine,and
R12056 T17767 T17763 arg1Of L-glutamine,1
R12057 T17767 T17764 arg1Of L-glutamine,%
R12058 T17767 T17765 arg1Of L-glutamine,200
R12059 T17767 T17768 arg1Of L-glutamine,(
R12060 T17769 T17768 arg2Of BioWhittaker,(
R12061 T17770 T17768 arg3Of ),(

UBERON-AE

Id Subject Object Predicate Lexical cue
T17617 292-297 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum

GO-CC

Id Subject Object Predicate Lexical cue
T17623 152-157 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T17622 76-81 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T17620 0-446 Sentence denotes Following isolation, PBMC were cultured at a final concentration of 3 × 106 cells/ml (for ELISA measurements) or 5 × 106/ml (for gel shifts) or 1 × 106 cells/ml (for flow cytometry) in RPMI 1640 medium (BioWhittaker, Heidelberg, Germany, LPS-free), containing 10% heat-inactivated fetal calf serum (FCS, low-LPS, Invitrogen, Karlsruhe, Germany), 1% penicillin (10000 U/ml), 1% streptomycin (10000 μg/ml), and 1% 200 mM L-glutamine (BioWhittaker).
T234 0-446 Sentence denotes Following isolation, PBMC were cultured at a final concentration of 3 × 106 cells/ml (for ELISA measurements) or 5 × 106/ml (for gel shifts) or 1 × 106 cells/ml (for flow cytometry) in RPMI 1640 medium (BioWhittaker, Heidelberg, Germany, LPS-free), containing 10% heat-inactivated fetal calf serum (FCS, low-LPS, Invitrogen, Karlsruhe, Germany), 1% penicillin (10000 U/ml), 1% streptomycin (10000 μg/ml), and 1% 200 mM L-glutamine (BioWhittaker).

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T17930 346-359 Entity denotes 1% penicillin
T17929 409-445 Entity denotes 1% 200 mM L-glutamine (BioWhittaker)
T17927 21-25 Entity denotes PBMC
T17926 129-132 Entity denotes gel
T17925 374-404 Entity denotes 1% streptomycin (10000 μg/ml),
T17924 304-311 Entity denotes low-LPS
T17923 238-246 Entity denotes LPS-free

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T17922 445-446 . denotes .
T17921 444-445 -RRB- denotes )
T17920 432-444 NNP denotes BioWhittaker
T17919 431-432 -LRB- denotes (
T17918 419-430 NNP denotes L-glutamine
T17917 416-418 NNP denotes mM
T17916 412-415 CD denotes 200
T17915 410-411 NN denotes %
T17914 409-410 CD denotes 1
T17913 405-408 CC denotes and
T17912 403-404 , denotes ,
T17911 402-403 -RRB- denotes )
T17910 400-402 NN denotes ml
T17909 399-400 NN denotes /
T17908 397-399 NN denotes μg
T17907 391-396 CD denotes 10000
T17906 390-391 -LRB- denotes (
T17905 377-389 NN denotes streptomycin
T17904 375-376 NN denotes %
T17903 374-375 CD denotes 1
T17902 372-373 , denotes ,
T17901 371-372 -RRB- denotes )
T17900 367-371 NNP denotes U/ml
T17899 361-366 CD denotes 10000
T17898 360-361 -LRB- denotes (
T17897 349-359 NN denotes penicillin
T17896 347-348 NN denotes %
T17895 346-347 CD denotes 1
T17894 344-345 , denotes ,
T17893 343-344 -RRB- denotes )
T17892 336-343 NNP denotes Germany
T17891 334-335 , denotes ,
T17890 325-334 NNP denotes Karlsruhe
T17889 323-324 , denotes ,
T17888 313-323 NNP denotes Invitrogen
T17887 311-312 , denotes ,
T17886 304-311 NNP denotes low-LPS
T17885 302-303 , denotes ,
T17884 299-302 NNP denotes FCS
T17883 298-299 -LRB- denotes (
T17882 292-297 NN denotes serum
T17881 287-291 NN denotes calf
T17880 281-286 JJ denotes fetal
T17879 264-280 JJ denotes heat-inactivated
T17878 262-263 NN denotes %
T17877 260-262 CD denotes 10
T17876 249-259 VBG denotes containing
T17875 247-248 , denotes ,
T17874 246-247 -RRB- denotes )
T17873 238-246 JJ denotes LPS-free
T17872 236-237 , denotes ,
T17871 229-236 NNP denotes Germany
T17870 227-228 , denotes ,
T17869 217-227 NNP denotes Heidelberg
T17868 215-216 , denotes ,
T17867 203-215 NNP denotes BioWhittaker
T17866 202-203 -LRB- denotes (
T17865 195-201 NN denotes medium
T17864 190-194 CD denotes 1640
T17863 185-189 NNP denotes RPMI
T17862 182-184 IN denotes in
T17861 180-181 -RRB- denotes )
T17860 171-180 NN denotes cytometry
T17859 166-170 NN denotes flow
T17858 162-165 IN denotes for
T17857 161-162 -LRB- denotes (
T17856 152-160 NN denotes cells/ml
T17855 148-151 CD denotes 106
T17854 146-147 CD denotes ×
T17853 144-145 CD denotes 1
T17852 141-143 CC denotes or
T17851 139-140 -RRB- denotes )
T17850 133-139 NNS denotes shifts
T17849 129-132 NN denotes gel
T17848 125-128 IN denotes for
T17847 124-125 -LRB- denotes (
T17846 117-123 CD denotes 106/ml
T17845 115-116 NN denotes ×
T17844 113-114 CD denotes 5
T17843 110-112 CC denotes or
T17842 108-109 -RRB- denotes )
T17841 96-108 NNS denotes measurements
T17840 90-95 NNP denotes ELISA
T17839 86-89 IN denotes for
T17838 85-86 -LRB- denotes (
T17837 76-84 NN denotes cells/ml
T17836 72-75 CD denotes 106
T17835 70-71 CD denotes ×
T17834 68-69 CD denotes 3
T17833 65-67 IN denotes of
T17832 51-64 NN denotes concentration
T17831 45-50 JJ denotes final
T17830 43-44 DT denotes a
T17829 40-42 IN denotes at
T17828 31-39 VBN denotes cultured
T17827 26-30 VBD denotes were
T17826 21-25 NNP denotes PBMC
T17825 19-20 , denotes ,
T17824 10-19 NN denotes isolation
T17823 0-9 VBG denotes Following
R12145 T17854 T17856 nummod ×,cells/ml
R12146 T17855 T17856 nummod 106,cells/ml
R12147 T17856 T17845 conj cells/ml,×
R12148 T17857 T17858 punct (,for
R12149 T17858 T17856 prep for,cells/ml
R12150 T17859 T17860 compound flow,cytometry
R12151 T17860 T17858 pobj cytometry,for
R12182 T17891 T17890 punct ",",Karlsruhe
R12183 T17892 T17890 conj Germany,Karlsruhe
R12184 T17893 T17890 punct ),Karlsruhe
R12185 T17894 T17888 punct ",",Invitrogen
R12186 T17895 T17896 nummod 1,%
R12187 T17896 T17897 compound %,penicillin
R12188 T17897 T17888 appos penicillin,Invitrogen
R12189 T17898 T17900 punct (,U/ml
R12190 T17899 T17900 nummod 10000,U/ml
R12191 T17900 T17897 appos U/ml,penicillin
R12192 T17901 T17900 punct ),U/ml
R12193 T17902 T17897 punct ",",penicillin
R12194 T17903 T17904 nummod 1,%
R12195 T17904 T17905 compound %,streptomycin
R12196 T17905 T17882 appos streptomycin,serum
R12197 T17906 T17905 punct (,streptomycin
R12198 T17907 T17910 nummod 10000,ml
R12199 T17908 T17910 compound μg,ml
R12200 T17909 T17910 compound /,ml
R12201 T17910 T17905 appos ml,streptomycin
R12202 T17911 T17905 punct ),streptomycin
R12203 T17912 T17905 punct ",",streptomycin
R12204 T17913 T17882 cc and,serum
R12205 T17914 T17915 nummod 1,%
R12206 T17915 T17876 npadvmod %,containing
R12207 T17916 T17918 nummod 200,L-glutamine
R12208 T17917 T17918 compound mM,L-glutamine
R12209 T17918 T17918 ROOT L-glutamine,L-glutamine
R12210 T17919 T17920 punct (,BioWhittaker
R12211 T17920 T17918 appos BioWhittaker,L-glutamine
R12212 T17921 T17918 punct ),L-glutamine
R12213 T17922 T17828 punct .,cultured
R12114 T17823 T17828 prep Following,cultured
R12115 T17824 T17823 pobj isolation,Following
R12116 T17825 T17828 punct ",",cultured
R12117 T17826 T17828 nsubjpass PBMC,cultured
R12118 T17827 T17828 auxpass were,cultured
R12119 T17828 T17828 ROOT cultured,cultured
R12120 T17829 T17828 prep at,cultured
R12121 T17830 T17832 det a,concentration
R12122 T17831 T17832 amod final,concentration
R12123 T17832 T17829 pobj concentration,at
R12124 T17833 T17832 prep of,concentration
R12125 T17834 T17837 nummod 3,cells/ml
R12126 T17835 T17837 nummod ×,cells/ml
R12127 T17836 T17837 nummod 106,cells/ml
R12128 T17837 T17833 pobj cells/ml,of
R12129 T17838 T17837 punct (,cells/ml
R12130 T17839 T17837 prep for,cells/ml
R12131 T17840 T17841 compound ELISA,measurements
R12132 T17841 T17839 pobj measurements,for
R12133 T17842 T17837 punct ),cells/ml
R12134 T17843 T17832 cc or,concentration
R12135 T17844 T17845 nummod 5,×
R12136 T17845 T17876 nmod ×,containing
R12137 T17846 T17845 nummod 106/ml,×
R12138 T17847 T17848 punct (,for
R12139 T17848 T17845 prep for,×
R12140 T17849 T17850 compound gel,shifts
R12141 T17850 T17848 pobj shifts,for
R12142 T17851 T17848 punct ),for
R12143 T17852 T17845 cc or,×
R12144 T17853 T17856 nummod 1,cells/ml
R12152 T17861 T17858 punct ),for
R12153 T17862 T17856 prep in,cells/ml
R12154 T17863 T17865 nmod RPMI,medium
R12155 T17864 T17865 nummod 1640,medium
R12156 T17865 T17862 pobj medium,in
R12157 T17866 T17876 punct (,containing
R12158 T17867 T17876 dep BioWhittaker,containing
R12159 T17868 T17867 punct ",",BioWhittaker
R12160 T17869 T17867 conj Heidelberg,BioWhittaker
R12161 T17870 T17869 punct ",",Heidelberg
R12162 T17871 T17867 npadvmod Germany,BioWhittaker
R12163 T17872 T17867 punct ",",BioWhittaker
R12164 T17873 T17867 appos LPS-free,BioWhittaker
R12165 T17874 T17873 punct ),LPS-free
R12166 T17875 T17876 punct ",",containing
R12167 T17876 T17828 advcl containing,cultured
R12168 T17877 T17878 nummod 10,%
R12169 T17878 T17882 nmod %,serum
R12170 T17879 T17882 amod heat-inactivated,serum
R12171 T17880 T17881 amod fetal,calf
R12172 T17881 T17882 compound calf,serum
R12173 T17882 T17876 dobj serum,containing
R12174 T17883 T17905 punct (,streptomycin
R12175 T17884 T17905 nmod FCS,streptomycin
R12176 T17885 T17884 punct ",",FCS
R12177 T17886 T17884 conj low-LPS,FCS
R12178 T17887 T17886 punct ",",low-LPS
R12179 T17888 T17886 conj Invitrogen,low-LPS
R12180 T17889 T17888 punct ",",Invitrogen
R12181 T17890 T17888 conj Karlsruhe,Invitrogen