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PMC:1472690 / 15954-16200 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6024 244-245 -RRB- denotes )
T6023 239-244 VB denotes shown
T6022 235-238 RB denotes not
T6021 230-234 NN denotes data
T6020 229-230 -LRB- denotes (
T6019 227-228 NN denotes h
T6018 224-226 CD denotes 48
T6017 219-223 IN denotes over
T6016 213-218 NN denotes calc.
T6015 203-212 NN denotes GP/TSST-1
T6014 200-202 CC denotes or
T6013 193-199 NN denotes TSST-1
T6012 191-192 SYM denotes +
T6011 188-190 NN denotes GP
T6010 184-187 CC denotes and
T6009 178-183 NN denotes calc.
T6008 171-177 NN denotes GP/LPS
T6007 169-170 -COMMA- denotes ,
T6006 166-169 NN denotes LPS
T6005 164-165 SYM denotes +
T6004 161-163 NN denotes GP
T6003 159-160 -COMMA- denotes ,
T6002 157-159 NN denotes GP
T6001 155-156 -COMMA- denotes ,
T6000 149-155 NN denotes TSST-1
T5999 147-148 -COMMA- denotes ,
T5998 144-147 NN denotes LPS
T5997 142-143 -COMMA- denotes ,
T5996 135-142 NN denotes control
T5995 128-134 NN denotes medium
T5994 120-127 IN denotes between
T5993 108-119 NN denotes differences
T5992 96-107 JJ denotes significant
T5991 93-95 DT denotes no
T5990 88-92 RB denotes also
T5989 83-87 VB denotes were
T5988 77-82 EX denotes There
T5987 73-75 NN denotes GP
T5986 70-72 IN denotes by
T5985 62-69 VB denotes induced
T5984 58-61 RB denotes not
T5983 54-57 VB denotes was
T5982 52-53 CD denotes 1
T5981 47-51 NN denotes TGFβ
T5980 43-46 CC denotes and
T5979 37-42 NN denotes IL-10
T5978 35-36 -COMMA- denotes ,
T5977 31-35 NN denotes IL-4
T5976 29-30 -COMMA- denotes ,
T5975 24-29 NN denotes IL-12
T5974 22-23 -COMMA- denotes ,
T5973 18-22 NN denotes IL-2
T5972 15-17 IN denotes of
T5971 4-14 NN denotes production
T5970 0-3 DT denotes The
R3705 T5971 T5970 arg1Of production,The
R3706 T5971 T5972 arg1Of production,of
R3707 T5971 T5983 arg1Of production,was
R3708 T5971 T5985 arg2Of production,induced
R3710 T5973 T5974 arg1Of IL-2,","
R3711 T5974 T5976 arg1Of ",",","
R3712 T5975 T5974 arg2Of IL-12,","
R3713 T5976 T5978 arg1Of ",",","
R3714 T5977 T5976 arg2Of IL-4,","
R3716 T5978 T5980 arg1Of ",",and
R3717 T5979 T5978 arg2Of IL-10,","
R3718 T5980 T5972 arg2Of and,of
R3720 T5981 T5980 arg2Of TGFβ,and
R3721 T5981 T5982 arg1Of TGFβ,1
R3723 T5985 T5983 arg2Of induced,was
R3724 T5985 T5984 arg1Of induced,not
R3725 T5987 T5985 arg1Of GP,induced
R3726 T5987 T5986 arg2Of GP,by
R3727 T5988 T5989 arg1Of There,were
R3728 T5989 T5990 arg1Of were,also
R3730 T5993 T5989 arg2Of differences,were
R3731 T5993 T5991 arg1Of differences,no
R3732 T5993 T5992 arg1Of differences,significant
R3733 T5993 T5994 arg1Of differences,between
R3735 T5996 T5995 arg1Of control,medium
R3736 T5996 T5997 arg1Of control,","
R3737 T5997 T5999 arg1Of ",",","
R3739 T5998 T5997 arg2Of LPS,","
R3741 T5999 T6001 arg1Of ",",","
R3742 T6000 T5999 arg2Of TSST-1,","
R3743 T6001 T6003 arg1Of ",",","
R3744 T6002 T6001 arg2Of GP,","
R3746 T6003 T6007 arg1Of ",",","
R3748 T6006 T6003 arg2Of LPS,","
R3749 T6006 T6004 arg1Of LPS,GP
R3750 T6006 T6005 arg1Of LPS,+
R3751 T6007 T6010 arg1Of ",",and
R3752 T6009 T6007 arg2Of calc.,","
R3753 T6009 T6008 arg1Of calc.,GP/LPS
R3754 T6010 T5994 arg2Of and,between
R3757 T6013 T6011 arg1Of TSST-1,GP
R3758 T6013 T6012 arg1Of TSST-1,+
R3759 T6013 T6014 arg1Of TSST-1,or
R3761 T6015 T6014 arg2Of GP/TSST-1,or
R3762 T6015 T6016 arg1Of GP/TSST-1,calc.
R3764 T6018 T6017 arg1Of 48,over
R3765 T6019 T6010 arg2Of h,and
R3766 T6019 T6013 arg1Of h,TSST-1
R3767 T6019 T6015 arg1Of h,GP/TSST-1
R3768 T6019 T6018 arg1Of h,48
R3769 T6019 T6020 arg1Of h,(
R3770 T6021 T6020 arg2Of data,(
R3771 T6021 T6023 arg2Of data,shown
R3772 T6023 T6022 arg1Of shown,not
R3773 T6024 T6020 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4995 206-212 Protein denotes TSST-1
T4994 193-199 Protein denotes TSST-1
T4993 149-155 Protein denotes TSST-1
T4992 47-53 Protein denotes TGFβ 1
T4991 37-42 Protein denotes IL-10
T4990 31-35 Protein denotes IL-4
T4989 24-29 Protein denotes IL-12
T4988 18-22 Protein denotes IL-2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6094 37-42 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T6092 31-35 http://www.uniprot.org/uniprot/P05112 denotes IL-4
T6090 24-29 http://www.uniprot.org/uniprot/P29460 denotes IL-12
T6088 24-29 http://www.uniprot.org/uniprot/P29459 denotes IL-12
T6086 18-22 http://www.uniprot.org/uniprot/P60568 denotes IL-2
T6049 206-212 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T6048 193-199 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T6047 149-155 http://www.uniprot.org/uniprot/P06886 denotes TSST-1

GO-BP

Id Subject Object Predicate Lexical cue
T4770 4-22 http://purl.obolibrary.org/obo/GO_0032663 denotes production of IL-2
T4769 4-22 http://purl.obolibrary.org/obo/GO_0032623 denotes production of IL-2

GO-MF

Id Subject Object Predicate Lexical cue
T5021 37-42 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10
T5019 31-35 http://purl.obolibrary.org/obo/GO_0005136 denotes IL-4
T5017 24-29 http://purl.obolibrary.org/obo/GO_0005143 denotes IL-12
T5015 18-22 http://purl.obolibrary.org/obo/GO_0005134 denotes IL-2

sentences

Id Subject Object Predicate Lexical cue
T4752 77-246 Sentence denotes There were also no significant differences between medium control, LPS, TSST-1, GP, GP + LPS, GP/LPS calc. and GP + TSST-1 or GP/TSST-1 calc. over 48 h (data not shown).
T4751 0-76 Sentence denotes The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1 was not induced by GP.
T124 0-76 Sentence denotes The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1 was not induced by GP.
T125 77-246 Sentence denotes There were also no significant differences between medium control, LPS, TSST-1, GP, GP + LPS, GP/LPS calc. and GP + TSST-1 or GP/TSST-1 calc. over 48 h (data not shown).

simple1

Id Subject Object Predicate Lexical cue
T5172 206-212 Protein denotes TSST-1
T5171 193-199 Protein denotes TSST-1
T5170 149-155 Protein denotes TSST-1
T5169 47-53 Protein denotes TGFβ 1
T5168 37-42 Protein denotes IL-10
T5167 31-35 Protein denotes IL-4
T5166 24-29 Protein denotes IL-12
T5165 18-22 Protein denotes IL-2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7759 62-69 Positive_regulation denotes induced
T7758 4-14 Gene_expression denotes production
T7719 206-212 Protein denotes TSST-1
T7718 193-199 Protein denotes TSST-1
T7717 149-155 Protein denotes TSST-1
T7716 47-53 Protein denotes TGFβ 1
T7715 37-42 Protein denotes IL-10
T7714 31-35 Protein denotes IL-4
T7713 24-29 Protein denotes IL-12
T7712 18-22 Protein denotes IL-2
R5006 T7712 T7758 themeOf IL-2,production
R5007 T7713 T7758 themeOf IL-12,production
R5008 T7714 T7758 themeOf IL-4,production
R5010 T7715 T7758 themeOf IL-10,production
R5011 T7716 T7758 themeOf TGFβ 1,production
R5043 T7758 T7759 themeOf production,induced
R5044 T7758 T7759 themeOf production,induced
R5045 T7758 T7759 themeOf production,induced
R5046 T7758 T7759 themeOf production,induced
R5047 T7758 T7759 themeOf production,induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6213 4-14 Gene_expression denotes production
T6212 62-69 Positive_regulation denotes induced
T6169 206-212 Protein denotes TSST-1
T6168 193-199 Protein denotes TSST-1
T6167 149-155 Protein denotes TSST-1
T6166 47-53 Protein denotes TGFβ 1
T6165 37-42 Protein denotes IL-10
T6164 31-35 Protein denotes IL-4
T6163 24-29 Protein denotes IL-12
T6162 18-22 Protein denotes IL-2
R3824 T6162 T6213 themeOf IL-2,production
R3825 T6163 T6213 themeOf IL-12,production
R3827 T6164 T6213 themeOf IL-4,production
R3828 T6165 T6213 themeOf IL-10,production
R3829 T6166 T6213 themeOf TGFβ 1,production
R3868 T6213 T6212 themeOf production,induced
R3869 T6213 T6212 themeOf production,induced
R3872 T6213 T6212 themeOf production,induced
R3873 T6213 T6212 themeOf production,induced
R3874 T6213 T6212 themeOf production,induced

DLUT931

Id Subject Object Predicate Lexical cue
T6378 206-212 Protein denotes TSST-1
T6377 193-199 Protein denotes TSST-1
T6376 149-155 Protein denotes TSST-1
T6375 47-53 Protein denotes TGFβ 1
T6374 37-42 Protein denotes IL-10
T6373 31-35 Protein denotes IL-4
T6372 24-29 Protein denotes IL-12
T6371 18-22 Protein denotes IL-2
T6421 62-69 Positive_regulation denotes induced
T6420 4-14 Gene_expression denotes production
R3949 T6371 T6420 themeOf IL-2,production
R3950 T6372 T6420 themeOf IL-12,production
R3951 T6373 T6420 themeOf IL-4,production
R3952 T6374 T6420 themeOf IL-10,production
R3955 T6375 T6420 themeOf TGFβ 1,production
R4016 T6420 T6421 themeOf production,induced
R4021 T6420 T6421 themeOf production,induced
R4023 T6420 T6421 themeOf production,induced
R4026 T6420 T6421 themeOf production,induced
R4028 T6420 T6421 themeOf production,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7799 0-53 Gene_expression denotes The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1
T7798 0-53 Gene_expression denotes The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1
T7797 0-53 Gene_expression denotes The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1
T7796 0-53 Gene_expression denotes The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1
T7616 37-42 Protein denotes IL-10
T7601 227-245 Entity denotes h (data not shown)
T7589 31-35 Protein denotes IL-4
T7584 206-212 Protein denotes TSST-1
T7558 144-159 Protein denotes LPS, TSST-1, GP
T7551 193-199 Protein denotes TSST-1
T7548 144-156 Entity denotes LPS, TSST-1,
T7535 70-75 Protein denotes by GP
T7526 203-217 Protein denotes GP/TSST-1 calc
T7632 166-182 Protein denotes LPS, GP/LPS calc
T7630 47-53 Protein denotes TGFβ 1
T7620 24-29 Protein denotes IL-12
T7795 0-53 Gene_expression denotes The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1
T7781 18-22 Protein denotes IL-2
T7777 166-182 Entity denotes LPS, GP/LPS calc
T7773 149-155 Protein denotes TSST-1
T7769 166-170 Entity denotes LPS,
R4978 T7620 T7798 themeOf IL-12,"The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1"
R4980 T7630 T7797 themeOf TGFβ 1,"The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1"
R4981 T7589 T7795 themeOf IL-4,"The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1"
R4986 T7616 T7799 themeOf IL-10,"The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1"
R5052 T7781 T7796 themeOf IL-2,"The production of IL-2, IL-12, IL-4, IL-10 and TGFβ 1"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7414 245-246 . denotes .
T7413 244-245 -RRB- denotes )
T7412 239-244 VBN denotes shown
T7411 235-238 RB denotes not
T7410 230-234 NNS denotes data
T7409 229-230 -LRB- denotes (
T7408 227-228 NN denotes h
T7407 224-226 CD denotes 48
T7406 219-223 IN denotes over
T7405 217-218 . denotes .
T7404 213-217 NN denotes calc
T7403 210-212 CD denotes -1
T7402 203-210 NNP denotes GP/TSST
T7401 200-202 CC denotes or
T7400 193-199 NNP denotes TSST-1
T7399 191-192 NNP denotes +
T7398 188-190 NNP denotes GP
T7397 184-187 CC denotes and
T7396 182-183 . denotes .
T7395 178-182 NN denotes calc
T7394 171-177 NNP denotes GP/LPS
T7393 169-170 , denotes ,
T7392 166-169 NNP denotes LPS
T7391 164-165 NNP denotes +
T7390 161-163 NNP denotes GP
T7389 159-160 , denotes ,
T7388 157-159 NNP denotes GP
T7387 155-156 , denotes ,
T7386 149-155 NNP denotes TSST-1
T7385 147-148 , denotes ,
T7384 144-147 NNP denotes LPS
T7383 142-143 , denotes ,
T7382 135-142 NN denotes control
T7381 128-134 JJ denotes medium
T7380 120-127 IN denotes between
T7379 108-119 NNS denotes differences
T7378 96-107 JJ denotes significant
T7377 93-95 DT denotes no
T7376 88-92 RB denotes also
T7375 83-87 VBD denotes were
T7374 77-82 EX denotes There
T7373 75-76 . denotes .
T7372 73-75 NNP denotes GP
T7371 70-72 IN denotes by
T7370 62-69 VBN denotes induced
T7369 58-61 RB denotes not
T7368 54-57 VBD denotes was
T7367 52-53 CD denotes 1
T7366 47-51 NNP denotes TGFβ
T7365 43-46 CC denotes and
T7364 37-42 NNP denotes IL-10
T7363 35-36 , denotes ,
T7362 31-35 NN denotes IL-4
T7361 29-30 , denotes ,
T7360 24-29 NN denotes IL-12
T7359 22-23 , denotes ,
T7358 18-22 NN denotes IL-2
T7357 15-17 IN denotes of
T7356 4-14 NN denotes production
T7355 0-3 DT denotes The
R4880 T7355 T7356 det The,production
R4882 T7356 T7370 nsubjpass production,induced
R4883 T7357 T7356 prep of,production
R4884 T7358 T7357 pobj IL-2,of
R4886 T7359 T7358 punct ",",IL-2
R4888 T7360 T7358 conj IL-12,IL-2
R4891 T7361 T7360 punct ",",IL-12
R4894 T7362 T7360 conj IL-4,IL-12
R4897 T7363 T7362 punct ",",IL-4
R4900 T7364 T7362 conj IL-10,IL-4
R4901 T7365 T7364 cc and,IL-10
R4904 T7366 T7364 conj TGFβ,IL-10
R4906 T7367 T7366 nummod 1,TGFβ
R4910 T7368 T7370 auxpass was,induced
R4912 T7369 T7370 neg not,induced
R4914 T7370 T7370 ROOT induced,induced
R4918 T7371 T7370 agent by,induced
R4919 T7372 T7371 pobj GP,by
R4920 T7373 T7370 punct .,induced
R4923 T7374 T7375 expl There,were
R4927 T7375 T7375 ROOT were,were
R4930 T7376 T7375 advmod also,were
R4932 T7377 T7379 det no,differences
R4933 T7378 T7379 amod significant,differences
R4934 T7379 T7375 attr differences,were
R4935 T7380 T7379 prep between,differences
R4936 T7381 T7382 amod medium,control
R4937 T7382 T7380 pobj control,between
R4938 T7383 T7382 punct ",",control
R4939 T7384 T7382 conj LPS,control
R4940 T7385 T7384 punct ",",LPS
R4941 T7386 T7384 conj TSST-1,LPS
R4943 T7387 T7386 punct ",",TSST-1
R4944 T7388 T7386 conj GP,TSST-1
R4945 T7389 T7388 punct ",",GP
R4946 T7390 T7392 compound GP,LPS
R4947 T7391 T7392 compound +,LPS
R4949 T7392 T7388 conj LPS,GP
R4951 T7393 T7392 punct ",",LPS
R4953 T7394 T7395 compound GP/LPS,calc
R4955 T7395 T7392 appos calc,LPS
R4956 T7396 T7375 punct .,were
R4957 T7397 T7375 cc and,were
R4958 T7398 T7400 compound GP,TSST-1
R4959 T7399 T7400 compound +,TSST-1
R4960 T7400 T7375 attr TSST-1,were
R4961 T7401 T7400 cc or,TSST-1
R4963 T7402 T7400 conj GP/TSST,TSST-1
R4964 T7403 T7404 nummod -1,calc
R4965 T7404 T7400 npadvmod calc,TSST-1
R4966 T7405 T7375 punct .,were
R4967 T7406 T7407 quantmod over,48
R4968 T7407 T7408 nummod 48,h
R4970 T7408 T7412 npadvmod h,shown
R4971 T7409 T7412 punct (,shown
R4972 T7410 T7412 nsubjpass data,shown
R4973 T7411 T7412 neg not,shown
R4974 T7412 T7412 ROOT shown,shown
R4975 T7413 T7412 punct ),shown
R4977 T7414 T7412 punct .,shown

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T6303 62-69 Positive_regulation denotes induced
T6302 62-69 Positive_regulation denotes induced
T6301 62-69 Positive_regulation denotes induced
T6300 62-69 Positive_regulation denotes induced
T6299 4-14 Gene_expression denotes production
T6298 4-14 Gene_expression denotes production
T6297 4-14 Gene_expression denotes production
T6296 4-14 Gene_expression denotes production
T6295 47-53 Protein denotes TGFβ 1
T6294 37-42 Protein denotes IL-10
T6293 24-35 Protein denotes IL-12, IL-4
T6292 18-22 Protein denotes IL-2
R3900 T6292 T6296 themeOf IL-2,production
R3906 T6293 T6297 themeOf "IL-12, IL-4",production
R3908 T6294 T6298 themeOf IL-10,production
R3910 T6295 T6299 themeOf TGFβ 1,production
R3915 T6296 T6300 themeOf production,induced
R3916 T6297 T6301 themeOf production,induced
R3918 T6298 T6302 themeOf production,induced
R3919 T6299 T6303 themeOf production,induced

testone

Id Subject Object Predicate Lexical cue
T4482 206-212 Protein denotes TSST-1
T4481 193-199 Protein denotes TSST-1
T4480 149-155 Protein denotes TSST-1
T4479 47-53 Protein denotes TGFβ 1
T4478 37-42 Protein denotes IL-10
T4477 31-35 Protein denotes IL-4
T4476 24-29 Protein denotes IL-12
T4475 18-22 Protein denotes IL-2
T4528 62-69 Positive_regulation denotes induced
T4527 4-14 Gene_expression denotes production
R2758 T4475 T4527 themeOf IL-2,production
R2759 T4476 T4528 themeOf IL-12,induced
R2760 T4476 T4527 themeOf IL-12,production
R2761 T4477 T4528 themeOf IL-4,induced
R2762 T4477 T4527 themeOf IL-4,production
R2763 T4478 T4528 themeOf IL-10,induced
R2764 T4478 T4527 themeOf IL-10,production
R2765 T4479 T4528 themeOf TGFβ 1,induced
R2766 T4479 T4527 themeOf TGFβ 1,production
R2791 T4527 T4528 themeOf production,induced

test3

Id Subject Object Predicate Lexical cue
T4603 206-212 Protein denotes TSST-1
T4602 193-199 Protein denotes TSST-1
T4601 149-155 Protein denotes TSST-1
T4600 47-53 Protein denotes TGFβ 1
T4599 37-42 Protein denotes IL-10
T4598 31-35 Protein denotes IL-4
T4597 24-29 Protein denotes IL-12
T4596 18-22 Protein denotes IL-2
T4717 206-212 Protein denotes TSST-1
T4716 193-199 Protein denotes TSST-1
T4715 149-155 Protein denotes TSST-1
T4714 62-69 Positive_regulation denotes induced
T4713 47-53 Protein denotes TGFβ 1
T4712 37-42 Protein denotes IL-10
T4711 31-35 Protein denotes IL-4
T4710 24-29 Protein denotes IL-12
T4709 18-22 Protein denotes IL-2
T4708 4-14 Gene_expression denotes production
R2856 T4708 T4714 themeOf production,induced
R2857 T4709 T4708 themeOf IL-2,production
R2858 T4710 T4708 themeOf IL-12,production
R2859 T4711 T4708 themeOf IL-4,production
R2860 T4712 T4714 themeOf IL-10,induced
R2861 T4712 T4708 themeOf IL-10,production
R2862 T4713 T4714 themeOf TGFβ 1,induced
R2863 T4713 T4708 themeOf TGFβ 1,production