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PMC:1448208 / 7355-8786 JSONTXT

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Id Subject Object Predicate Lexical cue
T5031 0-1 DT denotes A
T5032 14-22 NN denotes subclone
T5033 2-9 JJ denotes genomic
T5034 10-13 NN denotes DNA
T5035 123-131 VBN denotes obtained
T5036 23-25 IN denotes of
T5037 26-32 NN denotes Strain
T5038 41-44 NN denotes DNA
T5039 33-36 CD denotes 129
T5040 37-40 NN denotes SvJ
T5041 36-37 HYPH denotes /
T5042 45-49 WDT denotes that
T5043 50-59 VBD denotes contained
T5044 60-61 DT denotes a
T5045 62-69 NN denotes portion
T5046 70-72 IN denotes of
T5047 73-78 NNS denotes Exons
T5048 79-80 CD denotes 4
T5049 81-84 CC denotes and
T5050 85-86 CD denotes 5
T5051 87-89 IN denotes of
T5052 90-93 DT denotes the
T5053 97-101 NN denotes gene
T5054 94-96 NN denotes E2
T5055 102-105 CC denotes and
T5056 106-114 NN denotes flanking
T5057 115-118 NN denotes DNA
T5058 119-122 VBD denotes was
T5059 132-136 IN denotes from
T5060 137-138 DT denotes a
T5061 148-155 NN denotes library
T5062 139-141 NN denotes P1
T5063 142-147 NN denotes phage
T5064 156-160 IN denotes from
T5065 161-167 NNP denotes Genome
T5066 177-181 NNP denotes Inc.
T5067 168-175 NNP denotes Systems
T5068 175-177 , denotes ,
T5069 181-183 , denotes ,
T5070 183-184 -LRB- denotes (
T5071 215-222 NNP denotes Library
T5072 184-187 NNP denotes St.
T5073 188-193 NNP denotes Louis
T5074 193-195 , denotes ,
T5075 195-197 NNP denotes MO
T5076 197-198 : denotes ;
T5077 199-200 SYM denotes '
T5078 200-201 CD denotes 3
T5079 202-205 NN denotes Hit
T5080 201-202 HYPH denotes -
T5081 206-211 NNP denotes Mouse
T5082 212-214 NNP denotes ES
T5083 222-223 POS denotes '
T5084 223-224 -RRB- denotes )
T5085 224-225 . denotes .
T5086 225-465 sentence denotes A positive/negative replacement type gene targeting vector [21] was created by replacing a 1.67 kb EcoRV-Smal fragment that included a portion of Exon 4 and all of Exon 5 with the PGKneo marker gene (See Fig. 1A) from the pPNT vector [22].
T5087 226-227 DT denotes A
T5088 278-284 NN denotes vector
T5089 228-236 JJ denotes positive
T5090 237-245 JJ denotes negative
T5091 236-237 HYPH denotes /
T5092 246-257 NN denotes replacement
T5093 258-262 NN denotes type
T5094 263-267 NN denotes gene
T5095 268-277 NN denotes targeting
T5096 294-301 VBN denotes created
T5097 285-286 -LRB- denotes [
T5098 286-288 CD denotes 21
T5099 288-289 -RRB- denotes ]
T5100 290-293 VBD denotes was
T5101 302-304 IN denotes by
T5102 305-314 VBG denotes replacing
T5103 315-316 DT denotes a
T5104 336-344 NN denotes fragment
T5105 317-321 CD denotes 1.67
T5106 322-324 NN denotes kb
T5107 325-330 NN denotes EcoRV
T5108 331-335 NN denotes Smal
T5109 330-331 HYPH denotes -
T5110 345-349 WDT denotes that
T5111 350-358 VBD denotes included
T5112 359-360 DT denotes a
T5113 361-368 NN denotes portion
T5114 369-371 IN denotes of
T5115 372-376 NN denotes Exon
T5116 377-378 CD denotes 4
T5117 379-382 CC denotes and
T5118 383-386 DT denotes all
T5119 387-389 IN denotes of
T5120 390-394 NN denotes Exon
T5121 395-396 CD denotes 5
T5122 397-401 IN denotes with
T5123 402-405 DT denotes the
T5124 420-424 NN denotes gene
T5125 406-412 NN denotes PGKneo
T5126 413-419 NN denotes marker
T5127 425-426 -LRB- denotes (
T5128 426-429 VB denotes See
T5129 430-434 NN denotes Fig.
T5130 435-437 NN denotes 1A
T5131 437-438 -RRB- denotes )
T5132 439-443 IN denotes from
T5133 444-447 DT denotes the
T5134 453-459 NN denotes vector
T5135 448-452 NN denotes pPNT
T5136 460-461 -LRB- denotes [
T5137 461-463 CD denotes 22
T5138 463-464 -RRB- denotes ]
T5139 464-465 . denotes .
T5140 465-599 sentence denotes The targeting construct was linearized with NotI and electroporated into R1 ES cells [23] under conditions described previously [24].
T5141 466-469 DT denotes The
T5142 480-489 NN denotes construct
T5143 470-479 NN denotes targeting
T5144 494-504 VBN denotes linearized
T5145 490-493 VBD denotes was
T5146 505-509 IN denotes with
T5147 510-514 NN denotes NotI
T5148 515-518 CC denotes and
T5149 519-533 VBN denotes electroporated
T5150 534-538 IN denotes into
T5151 539-541 NN denotes R1
T5152 545-550 NNS denotes cells
T5153 542-544 NN denotes ES
T5154 551-552 -LRB- denotes [
T5155 552-554 CD denotes 23
T5156 554-555 -RRB- denotes ]
T5157 556-561 IN denotes under
T5158 562-572 NNS denotes conditions
T5159 573-582 VBN denotes described
T5160 583-593 RB denotes previously
T5161 594-595 -LRB- denotes [
T5162 595-597 CD denotes 24
T5163 597-598 -RRB- denotes ]
T5164 598-599 . denotes .
T5165 599-741 sentence denotes ES cells were selected with G418 (300 μg/ml; Life Technologies Inc., Gaithersburg, MD) and gancyclovir (2 μM; gift of Syntex, Palo Alto, CA).
T5166 600-602 NN denotes ES
T5167 603-608 NNS denotes cells
T5168 614-622 VBN denotes selected
T5169 609-613 VBD denotes were
T5170 623-627 IN denotes with
T5171 628-632 NN denotes G418
T5172 633-634 -LRB- denotes (
T5173 663-667 NNP denotes Inc.
T5174 634-637 CD denotes 300
T5175 638-640 NN denotes μg
T5176 640-641 SYM denotes /
T5177 641-643 NN denotes ml
T5178 643-644 : denotes ;
T5179 645-649 NNP denotes Life
T5180 650-662 NNP denotes Technologies
T5181 667-669 , denotes ,
T5182 669-681 NNP denotes Gaithersburg
T5183 681-683 , denotes ,
T5184 683-685 NNP denotes MD
T5185 685-686 -RRB- denotes )
T5186 687-690 CC denotes and
T5187 691-702 NN denotes gancyclovir
T5188 703-704 -LRB- denotes (
T5189 704-705 CD denotes 2
T5190 706-708 NN denotes μM
T5191 708-709 : denotes ;
T5192 710-714 NN denotes gift
T5193 715-717 IN denotes of
T5194 718-724 NNP denotes Syntex
T5195 724-726 , denotes ,
T5196 726-730 NNP denotes Palo
T5197 731-735 NNP denotes Alto
T5198 735-737 , denotes ,
T5199 737-739 NNP denotes CA
T5200 739-740 -RRB- denotes )
T5201 740-741 . denotes .
T5202 741-854 sentence denotes Doubly resistant clones were screened for gene targeting by Southern blot analysis of BglI digested genomic DNA.
T5203 742-748 RB denotes Doubly
T5204 749-758 JJ denotes resistant
T5205 759-765 NNS denotes clones
T5206 771-779 VBN denotes screened
T5207 766-770 VBD denotes were
T5208 780-783 IN denotes for
T5209 784-788 NN denotes gene
T5210 789-798 NN denotes targeting
T5211 799-801 IN denotes by
T5212 802-810 NNP denotes Southern
T5213 811-815 NN denotes blot
T5214 816-824 NN denotes analysis
T5215 825-827 IN denotes of
T5216 828-832 NN denotes BglI
T5217 850-853 NN denotes DNA
T5218 833-841 VBN denotes digested
T5219 842-849 JJ denotes genomic
T5220 853-854 . denotes .
T5221 854-957 sentence denotes Blots were hybridized with an Exon 6 specific probe that was external to the gene targeting construct.
T5222 855-860 NNS denotes Blots
T5223 866-876 VBN denotes hybridized
T5224 861-865 VBD denotes were
T5225 877-881 IN denotes with
T5226 882-884 DT denotes an
T5227 901-906 NN denotes probe
T5228 885-889 NN denotes Exon
T5229 892-900 JJ denotes specific
T5230 890-891 CD denotes 6
T5231 907-911 WDT denotes that
T5232 912-915 VBD denotes was
T5233 916-924 JJ denotes external
T5234 925-927 IN denotes to
T5235 928-931 DT denotes the
T5236 947-956 NN denotes construct
T5237 932-936 NN denotes gene
T5238 937-946 NN denotes targeting
T5239 956-957 . denotes .
T5240 957-1077 sentence denotes Correctly targeted ES cells were injected into C57BL/6J blastocysts to produce chimeric mice using standard procedures.
T5241 958-967 RB denotes Correctly
T5242 968-976 VBN denotes targeted
T5243 980-985 NNS denotes cells
T5244 977-979 NN denotes ES
T5245 991-999 VBN denotes injected
T5246 986-990 VBD denotes were
T5247 1000-1004 IN denotes into
T5248 1005-1010 NN denotes C57BL
T5249 1011-1013 NN denotes 6J
T5250 1010-1011 HYPH denotes /
T5251 1014-1025 NNS denotes blastocysts
T5252 1026-1028 TO denotes to
T5253 1029-1036 VB denotes produce
T5254 1037-1045 JJ denotes chimeric
T5255 1046-1050 NNS denotes mice
T5256 1051-1056 VBG denotes using
T5257 1057-1065 JJ denotes standard
T5258 1066-1076 NNS denotes procedures
T5259 1076-1077 . denotes .
T5260 1077-1234 sentence denotes Heterozygous offspring from germline competent chimeras were intercrossed to produce wild type (+/+), heterozygous (+/-) and homozygous knockout (-/-) mice.
T5261 1078-1090 JJ denotes Heterozygous
T5262 1091-1100 NN denotes offspring
T5263 1139-1151 VBN denotes intercrossed
T5264 1101-1105 IN denotes from
T5265 1106-1114 NN denotes germline
T5266 1115-1124 JJ denotes competent
T5267 1125-1133 NNS denotes chimeras
T5268 1134-1138 VBD denotes were
T5269 1152-1154 TO denotes to
T5270 1155-1162 VB denotes produce
T5271 1163-1167 JJ denotes wild
T5272 1168-1172 NN denotes type
T5273 1214-1222 NN denotes knockout
T5274 1173-1174 -LRB- denotes (
T5275 1176-1177 SYM denotes +
T5276 1174-1175 SYM denotes +
T5277 1175-1176 HYPH denotes /
T5278 1177-1178 -RRB- denotes )
T5279 1178-1180 , denotes ,
T5280 1180-1192 JJ denotes heterozygous
T5281 1193-1194 -LRB- denotes (
T5282 1196-1197 SYM denotes -
T5283 1194-1195 SYM denotes +
T5284 1195-1196 HYPH denotes /
T5285 1197-1198 -RRB- denotes )
T5286 1199-1202 CC denotes and
T5287 1203-1213 JJ denotes homozygous
T5288 1229-1233 NNS denotes mice
T5289 1223-1224 -LRB- denotes (
T5290 1226-1227 SYM denotes -
T5291 1224-1225 SYM denotes -
T5292 1225-1226 HYPH denotes /
T5293 1227-1228 -RRB- denotes )
T5294 1233-1234 . denotes .
T5295 1234-1284 sentence denotes At all generations, +/- breeding pairs were used.
T5296 1235-1237 IN denotes At
T5297 1279-1283 VBN denotes used
T5298 1238-1241 DT denotes all
T5299 1242-1253 NNS denotes generations
T5300 1253-1255 , denotes ,
T5301 1255-1256 SYM denotes +
T5302 1257-1258 SYM denotes -
T5303 1256-1257 HYPH denotes /
T5304 1268-1273 NNS denotes pairs
T5305 1259-1267 VBG denotes breeding
T5306 1274-1278 VBD denotes were
T5307 1283-1284 . denotes .
T5308 1284-1355 sentence denotes Results presented here are from mice derived from the F2+ generations.
T5309 1285-1292 NNS denotes Results
T5310 1308-1311 VBP denotes are
T5311 1293-1302 VBN denotes presented
T5312 1303-1307 RB denotes here
T5313 1312-1316 IN denotes from
T5314 1317-1321 NNS denotes mice
T5315 1322-1329 VBN denotes derived
T5316 1330-1334 IN denotes from
T5317 1335-1338 DT denotes the
T5318 1343-1354 NNS denotes generations
T5319 1339-1341 NN denotes F2
T5320 1341-1342 SYM denotes +
T5321 1354-1355 . denotes .
T5322 1355-1431 sentence denotes All animals were of a mixed C57BL/6J × Strain 129Sv/SvJ genetic background.
T5323 1356-1359 DT denotes All
T5324 1360-1367 NNS denotes animals
T5325 1368-1372 VBD denotes were
T5326 1373-1375 IN denotes of
T5327 1376-1377 DT denotes a
T5328 1420-1430 NN denotes background
T5329 1378-1383 VBN denotes mixed
T5330 1384-1389 NN denotes C57BL
T5331 1390-1392 NN denotes 6J
T5332 1389-1390 HYPH denotes /
T5333 1393-1394 SYM denotes ×
T5334 1395-1401 NN denotes Strain
T5335 1408-1411 NN denotes SvJ
T5336 1402-1407 NN denotes 129Sv
T5337 1407-1408 HYPH denotes /
T5338 1412-1419 JJ denotes genetic
T5339 1430-1431 . denotes .
R1315 T5031 T5032 det A,subclone
R1316 T5032 T5035 nsubjpass subclone,obtained
R1317 T5033 T5032 amod genomic,subclone
R1318 T5034 T5032 compound DNA,subclone
R1319 T5036 T5032 prep of,subclone
R1320 T5037 T5038 nmod Strain,DNA
R1321 T5038 T5036 pobj DNA,of
R1322 T5039 T5040 nummod 129,SvJ
R1323 T5040 T5038 compound SvJ,DNA
R1324 T5041 T5040 punct /,SvJ
R1325 T5042 T5043 dep that,contained
R1326 T5043 T5032 relcl contained,subclone
R1327 T5044 T5045 det a,portion
R1328 T5045 T5043 dobj portion,contained
R1329 T5046 T5045 prep of,portion
R1330 T5047 T5048 nmod Exons,4
R1331 T5048 T5046 pobj 4,of
R1332 T5049 T5048 cc and,4
R1333 T5050 T5048 conj 5,4
R1334 T5051 T5048 prep of,4
R1335 T5052 T5053 det the,gene
R1336 T5053 T5051 pobj gene,of
R1337 T5054 T5053 compound E2,gene
R1338 T5055 T5053 cc and,gene
R1339 T5056 T5057 compound flanking,DNA
R1340 T5057 T5053 conj DNA,gene
R1341 T5058 T5035 auxpass was,obtained
R1342 T5059 T5035 prep from,obtained
R1343 T5060 T5061 det a,library
R1344 T5061 T5059 pobj library,from
R1345 T5062 T5063 compound P1,phage
R1346 T5063 T5061 compound phage,library
R1347 T5064 T5061 prep from,library
R1348 T5065 T5066 nmod Genome,Inc.
R1349 T5066 T5064 pobj Inc.,from
R1350 T5067 T5066 nmod Systems,Inc.
R1351 T5068 T5066 punct ", ",Inc.
R1352 T5069 T5066 punct ", ",Inc.
R1353 T5070 T5071 punct (,Library
R1354 T5071 T5066 poss Library,Inc.
R1355 T5072 T5073 compound St.,Louis
R1356 T5073 T5071 dep Louis,Library
R1357 T5074 T5073 punct ", ",Louis
R1358 T5075 T5073 npadvmod MO,Louis
R1359 T5076 T5071 punct ;,Library
R1360 T5077 T5071 punct ',Library
R1361 T5078 T5079 nummod 3,Hit
R1362 T5079 T5071 compound Hit,Library
R1363 T5080 T5079 punct -,Hit
R1364 T5081 T5082 compound Mouse,ES
R1365 T5082 T5071 compound ES,Library
R1366 T5083 T5071 dep ',Library
R1367 T5084 T5071 punct ),Library
R1368 T5085 T5035 punct .,obtained
R1369 T5087 T5088 det A,vector
R1370 T5088 T5096 nsubjpass vector,created
R1371 T5089 T5090 amod positive,negative
R1372 T5090 T5088 amod negative,vector
R1373 T5091 T5090 punct /,negative
R1374 T5092 T5093 compound replacement,type
R1375 T5093 T5088 compound type,vector
R1376 T5094 T5095 compound gene,targeting
R1377 T5095 T5088 compound targeting,vector
R1378 T5097 T5098 punct [,21
R1379 T5098 T5088 parataxis 21,vector
R1380 T5099 T5098 punct ],21
R1381 T5100 T5096 auxpass was,created
R1382 T5101 T5096 prep by,created
R1383 T5102 T5101 pcomp replacing,by
R1384 T5103 T5104 det a,fragment
R1385 T5104 T5102 dobj fragment,replacing
R1386 T5105 T5106 nummod 1.67,kb
R1387 T5106 T5104 compound kb,fragment
R1388 T5107 T5108 compound EcoRV,Smal
R1389 T5108 T5104 compound Smal,fragment
R1390 T5109 T5108 punct -,Smal
R1391 T5110 T5111 dep that,included
R1392 T5111 T5104 relcl included,fragment
R1393 T5112 T5113 det a,portion
R1394 T5113 T5111 dobj portion,included
R1395 T5114 T5113 prep of,portion
R1396 T5115 T5114 pobj Exon,of
R1397 T5116 T5115 nummod 4,Exon
R1398 T5117 T5113 cc and,portion
R1399 T5118 T5113 conj all,portion
R1400 T5119 T5118 prep of,all
R1401 T5120 T5119 pobj Exon,of
R1402 T5121 T5120 nummod 5,Exon
R1403 T5122 T5113 prep with,portion
R1404 T5123 T5124 det the,gene
R1405 T5124 T5122 pobj gene,with
R1406 T5125 T5124 compound PGKneo,gene
R1407 T5126 T5124 compound marker,gene
R1408 T5127 T5128 punct (,See
R1409 T5128 T5124 parataxis See,gene
R1410 T5129 T5130 compound Fig.,1A
R1411 T5130 T5128 dobj 1A,See
R1412 T5131 T5128 punct ),See
R1413 T5132 T5124 prep from,gene
R1414 T5133 T5134 det the,vector
R1415 T5134 T5132 pobj vector,from
R1416 T5135 T5134 compound pPNT,vector
R1417 T5136 T5137 punct [,22
R1418 T5137 T5111 parataxis 22,included
R1419 T5138 T5137 punct ],22
R1420 T5139 T5096 punct .,created
R1421 T5141 T5142 det The,construct
R1422 T5142 T5144 nsubjpass construct,linearized
R1423 T5143 T5142 compound targeting,construct
R1424 T5145 T5144 auxpass was,linearized
R1425 T5146 T5144 prep with,linearized
R1426 T5147 T5146 pobj NotI,with
R1427 T5148 T5144 cc and,linearized
R1428 T5149 T5144 conj electroporated,linearized
R1429 T5150 T5149 prep into,electroporated
R1430 T5151 T5152 compound R1,cells
R1431 T5152 T5150 pobj cells,into
R1432 T5153 T5152 compound ES,cells
R1433 T5154 T5155 punct [,23
R1434 T5155 T5152 parataxis 23,cells
R1435 T5156 T5155 punct ],23
R1436 T5157 T5149 prep under,electroporated
R1437 T5158 T5157 pobj conditions,under
R1438 T5159 T5158 acl described,conditions
R1439 T5160 T5159 advmod previously,described
R1440 T5161 T5162 punct [,24
R1441 T5162 T5159 parataxis 24,described
R1442 T5163 T5162 punct ],24
R1443 T5164 T5144 punct .,linearized
R1444 T5166 T5167 compound ES,cells
R1445 T5167 T5168 nsubjpass cells,selected
R1446 T5169 T5168 auxpass were,selected
R1447 T5170 T5168 prep with,selected
R1448 T5171 T5170 pobj G418,with
R1449 T5172 T5173 punct (,Inc.
R1450 T5173 T5171 parataxis Inc.,G418
R1451 T5174 T5175 nummod 300,μg
R1452 T5175 T5173 dep μg,Inc.
R1453 T5176 T5177 punct /,ml
R1454 T5177 T5175 prep ml,μg
R1455 T5178 T5173 punct ;,Inc.
R1456 T5179 T5173 compound Life,Inc.
R1457 T5180 T5173 compound Technologies,Inc.
R1458 T5181 T5173 punct ", ",Inc.
R1459 T5182 T5173 npadvmod Gaithersburg,Inc.
R1460 T5183 T5173 punct ", ",Inc.
R1461 T5184 T5173 npadvmod MD,Inc.
R1462 T5185 T5173 punct ),Inc.
R1463 T5186 T5171 cc and,G418
R1464 T5187 T5171 conj gancyclovir,G418
R1465 T5188 T5187 punct (,gancyclovir
R1466 T5189 T5190 nummod 2,μM
R1467 T5190 T5187 nmod μM,gancyclovir
R1468 T5191 T5187 punct ;,gancyclovir
R1469 T5192 T5187 nmod gift,gancyclovir
R1470 T5193 T5192 prep of,gift
R1471 T5194 T5193 pobj Syntex,of
R1472 T5195 T5194 punct ", ",Syntex
R1473 T5196 T5197 compound Palo,Alto
R1474 T5197 T5194 npadvmod Alto,Syntex
R1475 T5198 T5194 punct ", ",Syntex
R1476 T5199 T5194 npadvmod CA,Syntex
R1477 T5200 T5187 punct ),gancyclovir
R1478 T5201 T5168 punct .,selected
R1479 T5203 T5204 advmod Doubly,resistant
R1480 T5204 T5205 amod resistant,clones
R1481 T5205 T5206 nsubjpass clones,screened
R1482 T5207 T5206 auxpass were,screened
R1483 T5208 T5206 prep for,screened
R1484 T5209 T5210 compound gene,targeting
R1485 T5210 T5208 pobj targeting,for
R1486 T5211 T5206 prep by,screened
R1487 T5212 T5213 compound Southern,blot
R1488 T5213 T5214 compound blot,analysis
R1489 T5214 T5211 pobj analysis,by
R1490 T5215 T5214 prep of,analysis
R1491 T5216 T5217 nmod BglI,DNA
R1492 T5217 T5215 pobj DNA,of
R1493 T5218 T5217 amod digested,DNA
R1494 T5219 T5217 amod genomic,DNA
R1495 T5220 T5206 punct .,screened
R1496 T5222 T5223 nsubjpass Blots,hybridized
R1497 T5224 T5223 auxpass were,hybridized
R1498 T5225 T5223 prep with,hybridized
R1499 T5226 T5227 det an,probe
R1500 T5227 T5225 pobj probe,with
R1501 T5228 T5229 npadvmod Exon,specific
R1502 T5229 T5227 amod specific,probe
R1503 T5230 T5228 nummod 6,Exon
R1504 T5231 T5232 dep that,was
R1505 T5232 T5227 relcl was,probe
R1506 T5233 T5232 acomp external,was
R1507 T5234 T5233 prep to,external
R1508 T5235 T5236 det the,construct
R1509 T5236 T5234 pobj construct,to
R1510 T5237 T5238 compound gene,targeting
R1511 T5238 T5236 compound targeting,construct
R1512 T5239 T5223 punct .,hybridized
R1513 T5241 T5242 advmod Correctly,targeted
R1514 T5242 T5243 amod targeted,cells
R1515 T5243 T5245 nsubjpass cells,injected
R1516 T5244 T5243 compound ES,cells
R1517 T5246 T5245 auxpass were,injected
R1518 T5247 T5245 prep into,injected
R1519 T5248 T5249 compound C57BL,6J
R1520 T5249 T5251 compound 6J,blastocysts
R1521 T5250 T5249 punct /,6J
R1522 T5251 T5247 pobj blastocysts,into
R1523 T5252 T5253 aux to,produce
R1524 T5253 T5245 advcl produce,injected
R1525 T5254 T5255 amod chimeric,mice
R1526 T5255 T5253 dobj mice,produce
R1527 T5256 T5253 advcl using,produce
R1528 T5257 T5258 amod standard,procedures
R1529 T5258 T5256 dobj procedures,using
R1530 T5259 T5245 punct .,injected
R1531 T5261 T5262 amod Heterozygous,offspring
R1532 T5262 T5263 nsubjpass offspring,intercrossed
R1533 T5264 T5262 prep from,offspring
R1534 T5265 T5266 npadvmod germline,competent
R1535 T5266 T5267 amod competent,chimeras
R1536 T5267 T5264 pobj chimeras,from
R1537 T5268 T5263 auxpass were,intercrossed
R1538 T5269 T5270 aux to,produce
R1539 T5270 T5263 advcl produce,intercrossed
R1540 T5271 T5272 amod wild,type
R1541 T5272 T5273 nmod type,knockout
R1542 T5273 T5288 nmod knockout,mice
R1543 T5274 T5275 punct (,+
R1544 T5275 T5272 punct +,type
R1545 T5276 T5275 punct +,+
R1546 T5277 T5275 punct /,+
R1547 T5278 T5275 punct ),+
R1548 T5279 T5272 punct ", ",type
R1549 T5280 T5272 conj heterozygous,type
R1550 T5281 T5282 punct (,-
R1551 T5282 T5280 punct -,heterozygous
R1552 T5283 T5282 punct +,-
R1553 T5284 T5282 punct /,-
R1554 T5285 T5282 punct ),-
R1555 T5286 T5280 cc and,heterozygous
R1556 T5287 T5280 conj homozygous,heterozygous
R1557 T5288 T5270 dobj mice,produce
R1558 T5289 T5290 punct (,-
R1559 T5290 T5273 punct -,knockout
R1560 T5291 T5290 punct -,-
R1561 T5292 T5290 punct /,-
R1562 T5293 T5290 punct ),-
R1563 T5294 T5263 punct .,intercrossed
R1564 T5296 T5297 prep At,used
R1565 T5298 T5299 det all,generations
R1566 T5299 T5296 pobj generations,At
R1567 T5300 T5297 punct ", ",used
R1568 T5301 T5302 punct +,-
R1569 T5302 T5304 punct -,pairs
R1570 T5303 T5302 punct /,-
R1571 T5304 T5297 nsubjpass pairs,used
R1572 T5305 T5304 amod breeding,pairs
R1573 T5306 T5297 auxpass were,used
R1574 T5307 T5297 punct .,used
R1575 T5309 T5310 nsubj Results,are
R1576 T5311 T5309 acl presented,Results
R1577 T5312 T5311 advmod here,presented
R1578 T5313 T5310 prep from,are
R1579 T5314 T5313 pobj mice,from
R1580 T5315 T5314 acl derived,mice
R1581 T5316 T5315 prep from,derived
R1582 T5317 T5318 det the,generations
R1583 T5318 T5316 pobj generations,from
R1584 T5319 T5318 nmod F2,generations
R1585 T5320 T5319 punct +,F2
R1586 T5321 T5310 punct .,are
R1587 T5323 T5324 det All,animals
R1588 T5324 T5325 nsubj animals,were
R1589 T5326 T5325 prep of,were
R1590 T5327 T5328 det a,background
R1591 T5328 T5326 pobj background,of
R1592 T5329 T5328 amod mixed,background
R1593 T5330 T5331 nmod C57BL,6J
R1594 T5331 T5328 nmod 6J,background
R1595 T5332 T5331 punct /,6J
R1596 T5333 T5331 punct ×,6J
R1597 T5334 T5335 compound Strain,SvJ
R1598 T5335 T5331 appos SvJ,6J
R1599 T5336 T5335 compound 129Sv,SvJ
R1600 T5337 T5335 punct /,SvJ
R1601 T5338 T5328 amod genetic,background
R1602 T5339 T5325 punct .,were

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4969 2-13 SO_EXT:genomic_DNA denotes genomic DNA
T4970 10-13 CHEBI_SO_EXT:DNA denotes DNA
T4971 41-44 CHEBI_SO_EXT:DNA denotes DNA
T4972 62-78 SO_EXT:0000852 denotes portion of Exons
T4973 94-96 PR_EXT:000006300 denotes E2
T4974 97-101 SO_EXT:0000704 denotes gene
T4975 106-114 SO:0000357 denotes flanking
T4976 115-118 CHEBI_SO_EXT:DNA denotes DNA
T4977 139-147 NCBITaxon:10678 denotes P1 phage
T4978 161-167 SO_EXT:0001026 denotes Genome
T4979 206-211 NCBITaxon:10088 denotes Mouse
T4980 212-214 CL:0002322 denotes ES
T4981 246-257 SO_EXT:sequence_substitution_entity_or_process denotes replacement
T4982 263-267 SO_EXT:0000704 denotes gene
T4983 268-284 SO_EXT:0001644 denotes targeting vector
T4984 305-314 SO_EXT:sequence_substitution_process denotes replacing
T4985 323-324 CHEBI_SO_EXT:base denotes b
T4986 361-376 SO_EXT:0000852 denotes portion of Exon
T4987 390-394 SO_EXT:0000147 denotes Exon
T4988 413-419 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T4989 420-424 SO_EXT:0000704 denotes gene
T4990 453-459 SO_EXT:0000440 denotes vector
T4991 480-489 SO_EXT:engineered_biological_sequence denotes construct
T4992 494-504 SO_EXT:sequence_linearization denotes linearized
T4993 542-550 CL:0002322 denotes ES cells
T4994 545-550 CL_GO_EXT:cell denotes cells
T4995 600-608 CL:0002322 denotes ES cells
T4996 603-608 CL_GO_EXT:cell denotes cells
T4997 628-632 CHEBI:42768 denotes G418
T4998 645-649 UBERON:0000104 denotes Life
T4999 691-702 CHEBI:465284 denotes gancyclovir
T5000 759-765 SO_EXT:sequence_cloned_entity denotes clones
T5001 784-788 SO_EXT:0000704 denotes gene
T5002 842-853 SO_EXT:genomic_DNA denotes genomic DNA
T5003 850-853 CHEBI_SO_EXT:DNA denotes DNA
T5004 866-876 GO:0097617 denotes hybridized
T5005 885-889 SO_EXT:0000147 denotes Exon
T5006 901-906 CHEBI_SO_EXT:molecular_probe denotes probe
T5007 932-936 SO_EXT:0000704 denotes gene
T5008 947-956 SO_EXT:engineered_biological_sequence denotes construct
T5009 977-985 CL:0002322 denotes ES cells
T5010 980-985 CL_GO_EXT:cell denotes cells
T5011 1014-1025 UBERON:0000358 denotes blastocysts
T5012 1046-1050 NCBITaxon:10088 denotes mice
T5013 1163-1172 SO_EXT:wild_type_entity_or_quality denotes wild type
T5014 1174-1175 SO_EXT:normal_or_wild_type_or_present denotes +
T5015 1176-1177 SO_EXT:normal_or_wild_type_or_present denotes +
T5016 1194-1195 SO_EXT:normal_or_wild_type_or_present denotes +
T5017 1196-1197 SO_EXT:sequence_nullness_or_absence denotes -
T5018 1224-1225 SO_EXT:sequence_nullness_or_absence denotes -
T5019 1226-1227 SO_EXT:sequence_nullness_or_absence denotes -
T5020 1229-1233 NCBITaxon:10088 denotes mice
T5021 1255-1256 SO_EXT:normal_or_wild_type_or_present denotes +
T5022 1257-1258 SO_EXT:sequence_nullness_or_absence denotes -
T5023 1259-1267 GO_EXT:breeding denotes breeding
T5024 1317-1321 NCBITaxon:10088 denotes mice
T5025 1360-1367 NCBITaxon:33208 denotes animals
T5026 1412-1419 SO_EXT:0000704 denotes genetic

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4936 2-9 SO:0001026 denotes genomic
T4937 62-78 SO:0000852 denotes portion of Exons
T4938 94-96 PR:000006300 denotes E2
T4939 97-101 SO:0000704 denotes gene
T4940 106-114 SO:0000357 denotes flanking
T4941 139-147 NCBITaxon:10678 denotes P1 phage
T4942 161-167 SO:0001026 denotes Genome
T4943 206-211 NCBITaxon:10088 denotes Mouse
T4944 212-214 CL:0002322 denotes ES
T4945 263-267 SO:0000704 denotes gene
T4946 268-284 SO:0001644 denotes targeting vector
T4947 361-376 SO:0000852 denotes portion of Exon
T4948 390-394 SO:0000147 denotes Exon
T4949 420-424 SO:0000704 denotes gene
T4950 453-459 SO:0000440 denotes vector
T4951 542-550 CL:0002322 denotes ES cells
T4952 600-608 CL:0002322 denotes ES cells
T4953 628-632 CHEBI:42768 denotes G418
T4954 645-649 UBERON:0000104 denotes Life
T4955 691-702 CHEBI:465284 denotes gancyclovir
T4956 784-788 SO:0000704 denotes gene
T4957 842-849 SO:0001026 denotes genomic
T4958 866-876 GO:0097617 denotes hybridized
T4959 885-889 SO:0000147 denotes Exon
T4960 932-936 SO:0000704 denotes gene
T4961 977-985 CL:0002322 denotes ES cells
T4962 1014-1025 UBERON:0000358 denotes blastocysts
T4963 1046-1050 NCBITaxon:10088 denotes mice
T4964 1229-1233 NCBITaxon:10088 denotes mice
T4965 1317-1321 NCBITaxon:10088 denotes mice
T4966 1360-1367 NCBITaxon:33208 denotes animals
T4967 1412-1419 SO:0000704 denotes genetic