PMC:1435744 / 131-652
Annnotations
craft-ca-core-ex-dev
{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T903","span":{"begin":25,"end":30},"obj":"SO_EXT:sequence_or_structure_motif"},{"id":"T904","span":{"begin":37,"end":44},"obj":"SO_EXT:0000417"},{"id":"T905","span":{"begin":53,"end":61},"obj":"CHEBI_EXT:residue"},{"id":"T906","span":{"begin":100,"end":107},"obj":"CHEBI_PR_EXT:protein"},{"id":"T907","span":{"begin":108,"end":115},"obj":"CHEBI_PR_EXT:protein"},{"id":"T908","span":{"begin":128,"end":135},"obj":"SO_EXT:0000417"},{"id":"T909","span":{"begin":142,"end":148},"obj":"SO_EXT:0000417"},{"id":"T910","span":{"begin":179,"end":187},"obj":"CHEBI_PR_EXT:protein"},{"id":"T911","span":{"begin":220,"end":228},"obj":"CHEBI_PR_EXT:protein"},{"id":"T912","span":{"begin":244,"end":257},"obj":"GO_EXT:transcription"},{"id":"T913","span":{"begin":244,"end":265},"obj":"GO_EXT:transcription_factor"},{"id":"T914","span":{"begin":295,"end":302},"obj":"SO_EXT:sequence_cloning_process"},{"id":"T915","span":{"begin":350,"end":356},"obj":"SO_EXT:0000417"},{"id":"T916","span":{"begin":368,"end":375},"obj":"CHEBI_PR_EXT:protein"},{"id":"T917","span":{"begin":400,"end":409},"obj":"GO:0010467"},{"id":"T918","span":{"begin":413,"end":420},"obj":"UBERON:0000966"},{"id":"T919","span":{"begin":413,"end":435},"obj":"CL:0010009"},{"id":"T920","span":{"begin":444,"end":456},"obj":"UBERON:0001905"},{"id":"T921","span":{"begin":475,"end":480},"obj":"NCBITaxon:10088"},{"id":"T922","span":{"begin":481,"end":485},"obj":"PR_EXT:000014441"},{"id":"T923","span":{"begin":487,"end":519},"obj":"PR_EXT:000014441"},{"id":"T924","span":{"begin":493,"end":500},"obj":"UBERON:0000966"},{"id":"T925","span":{"begin":505,"end":511},"obj":"SO_EXT:0000417"},{"id":"T926","span":{"begin":512,"end":519},"obj":"CHEBI_PR_EXT:protein"}],"text":"Background\nSterile alpha motif (SAM) domains are ~70 residues long and have been reported as common protein-protein interaction modules. This domain is found in a large number of proteins, including Polycomb group (PcG) proteins and ETS family transcription factors. In this work, we report the cloning and functional characterization of a novel SAM domain-containing protein, which is predominantly expressed in retinal photoreceptors and the pineal gland and is designated mouse mr-s (major retinal SAM domain protein)."}
craft-ca-core-dev
{"project":"craft-ca-core-dev","denotations":[{"id":"T827","span":{"begin":37,"end":44},"obj":"SO:0000417"},{"id":"T828","span":{"begin":128,"end":135},"obj":"SO:0000417"},{"id":"T829","span":{"begin":142,"end":148},"obj":"SO:0000417"},{"id":"T830","span":{"begin":350,"end":356},"obj":"SO:0000417"},{"id":"T831","span":{"begin":400,"end":409},"obj":"GO:0010467"},{"id":"T832","span":{"begin":413,"end":420},"obj":"UBERON:0000966"},{"id":"T833","span":{"begin":413,"end":435},"obj":"CL:0010009"},{"id":"T834","span":{"begin":444,"end":456},"obj":"UBERON:0001905"},{"id":"T835","span":{"begin":475,"end":480},"obj":"NCBITaxon:10088"},{"id":"T836","span":{"begin":481,"end":485},"obj":"PR:000014441"},{"id":"T837","span":{"begin":487,"end":519},"obj":"PR:000014441"},{"id":"T838","span":{"begin":493,"end":500},"obj":"UBERON:0000966"},{"id":"T839","span":{"begin":505,"end":511},"obj":"SO:0000417"}],"text":"Background\nSterile alpha motif (SAM) domains are ~70 residues long and have been reported as common protein-protein interaction modules. This domain is found in a large number of proteins, including Polycomb group (PcG) proteins and ETS family transcription factors. In this work, we report the cloning and functional characterization of a novel SAM domain-containing protein, which is predominantly expressed in retinal photoreceptors and the pineal gland and is designated mouse mr-s (major retinal SAM domain protein)."}
craft-sa-dev
{"project":"craft-sa-dev","denotations":[{"id":"T1025","span":{"begin":0,"end":10},"obj":"sentence"},{"id":"T1026","span":{"begin":0,"end":10},"obj":"NN"},{"id":"T1027","span":{"begin":10,"end":136},"obj":"sentence"},{"id":"T1028","span":{"begin":11,"end":18},"obj":"JJ"},{"id":"T1029","span":{"begin":25,"end":30},"obj":"NN"},{"id":"T1030","span":{"begin":19,"end":24},"obj":"NN"},{"id":"T1031","span":{"begin":37,"end":44},"obj":"NNS"},{"id":"T1032","span":{"begin":31,"end":32},"obj":"-LRB-"},{"id":"T1033","span":{"begin":32,"end":35},"obj":"NN"},{"id":"T1034","span":{"begin":35,"end":36},"obj":"-RRB-"},{"id":"T1035","span":{"begin":45,"end":48},"obj":"VBP"},{"id":"T1036","span":{"begin":49,"end":50},"obj":"SYM"},{"id":"T1037","span":{"begin":50,"end":52},"obj":"CD"},{"id":"T1038","span":{"begin":53,"end":61},"obj":"NNS"},{"id":"T1039","span":{"begin":62,"end":66},"obj":"JJ"},{"id":"T1040","span":{"begin":67,"end":70},"obj":"CC"},{"id":"T1041","span":{"begin":71,"end":75},"obj":"VBP"},{"id":"T1042","span":{"begin":81,"end":89},"obj":"VBN"},{"id":"T1043","span":{"begin":76,"end":80},"obj":"VBN"},{"id":"T1044","span":{"begin":90,"end":92},"obj":"IN"},{"id":"T1045","span":{"begin":93,"end":99},"obj":"JJ"},{"id":"T1046","span":{"begin":128,"end":135},"obj":"NNS"},{"id":"T1047","span":{"begin":100,"end":107},"obj":"NN"},{"id":"T1048","span":{"begin":108,"end":115},"obj":"NN"},{"id":"T1049","span":{"begin":107,"end":108},"obj":"HYPH"},{"id":"T1050","span":{"begin":116,"end":127},"obj":"NN"},{"id":"T1051","span":{"begin":135,"end":136},"obj":"."},{"id":"T1052","span":{"begin":136,"end":266},"obj":"sentence"},{"id":"T1053","span":{"begin":137,"end":141},"obj":"DT"},{"id":"T1054","span":{"begin":142,"end":148},"obj":"NN"},{"id":"T1055","span":{"begin":152,"end":157},"obj":"VBN"},{"id":"T1056","span":{"begin":149,"end":151},"obj":"VBZ"},{"id":"T1057","span":{"begin":158,"end":160},"obj":"IN"},{"id":"T1058","span":{"begin":161,"end":162},"obj":"DT"},{"id":"T1059","span":{"begin":169,"end":175},"obj":"NN"},{"id":"T1060","span":{"begin":163,"end":168},"obj":"JJ"},{"id":"T1061","span":{"begin":176,"end":178},"obj":"IN"},{"id":"T1062","span":{"begin":179,"end":187},"obj":"NN"},{"id":"T1063","span":{"begin":187,"end":189},"obj":","},{"id":"T1064","span":{"begin":189,"end":198},"obj":"VBG"},{"id":"T1065","span":{"begin":199,"end":207},"obj":"NN"},{"id":"T1066","span":{"begin":208,"end":213},"obj":"NN"},{"id":"T1067","span":{"begin":220,"end":228},"obj":"NN"},{"id":"T1068","span":{"begin":214,"end":215},"obj":"-LRB-"},{"id":"T1069","span":{"begin":215,"end":218},"obj":"NN"},{"id":"T1070","span":{"begin":218,"end":219},"obj":"-RRB-"},{"id":"T1071","span":{"begin":229,"end":232},"obj":"CC"},{"id":"T1072","span":{"begin":233,"end":236},"obj":"NN"},{"id":"T1073","span":{"begin":237,"end":243},"obj":"NN"},{"id":"T1074","span":{"begin":258,"end":265},"obj":"NNS"},{"id":"T1075","span":{"begin":244,"end":257},"obj":"NN"},{"id":"T1076","span":{"begin":265,"end":266},"obj":"."},{"id":"T1077","span":{"begin":266,"end":521},"obj":"sentence"},{"id":"T1078","span":{"begin":267,"end":269},"obj":"IN"},{"id":"T1079","span":{"begin":284,"end":290},"obj":"VBP"},{"id":"T1080","span":{"begin":270,"end":274},"obj":"DT"},{"id":"T1081","span":{"begin":275,"end":279},"obj":"NN"},{"id":"T1082","span":{"begin":279,"end":281},"obj":","},{"id":"T1083","span":{"begin":281,"end":283},"obj":"PRP"},{"id":"T1084","span":{"begin":291,"end":294},"obj":"DT"},{"id":"T1085","span":{"begin":295,"end":302},"obj":"NN"},{"id":"T1086","span":{"begin":303,"end":306},"obj":"CC"},{"id":"T1087","span":{"begin":307,"end":317},"obj":"JJ"},{"id":"T1088","span":{"begin":318,"end":334},"obj":"NN"},{"id":"T1089","span":{"begin":335,"end":337},"obj":"IN"},{"id":"T1090","span":{"begin":338,"end":339},"obj":"DT"},{"id":"T1091","span":{"begin":368,"end":375},"obj":"NN"},{"id":"T1092","span":{"begin":340,"end":345},"obj":"JJ"},{"id":"T1093","span":{"begin":346,"end":349},"obj":"NN"},{"id":"T1094","span":{"begin":350,"end":356},"obj":"NN"},{"id":"T1095","span":{"begin":357,"end":367},"obj":"VBG"},{"id":"T1096","span":{"begin":356,"end":357},"obj":"HYPH"},{"id":"T1097","span":{"begin":375,"end":377},"obj":","},{"id":"T1098","span":{"begin":377,"end":382},"obj":"WDT"},{"id":"T1099","span":{"begin":400,"end":409},"obj":"VBN"},{"id":"T1100","span":{"begin":383,"end":385},"obj":"VBZ"},{"id":"T1101","span":{"begin":386,"end":399},"obj":"RB"},{"id":"T1102","span":{"begin":410,"end":412},"obj":"IN"},{"id":"T1103","span":{"begin":413,"end":420},"obj":"JJ"},{"id":"T1104","span":{"begin":421,"end":435},"obj":"NNS"},{"id":"T1105","span":{"begin":436,"end":439},"obj":"CC"},{"id":"T1106","span":{"begin":440,"end":443},"obj":"DT"},{"id":"T1107","span":{"begin":451,"end":456},"obj":"NN"},{"id":"T1108","span":{"begin":444,"end":450},"obj":"JJ"},{"id":"T1109","span":{"begin":457,"end":460},"obj":"CC"},{"id":"T1110","span":{"begin":461,"end":463},"obj":"VBZ"},{"id":"T1111","span":{"begin":464,"end":474},"obj":"VBN"},{"id":"T1112","span":{"begin":475,"end":480},"obj":"NN"},{"id":"T1113","span":{"begin":484,"end":485},"obj":"NN"},{"id":"T1114","span":{"begin":481,"end":483},"obj":"NN"},{"id":"T1115","span":{"begin":483,"end":484},"obj":"HYPH"},{"id":"T1116","span":{"begin":486,"end":487},"obj":"-LRB-"},{"id":"T1117","span":{"begin":512,"end":519},"obj":"NN"},{"id":"T1118","span":{"begin":487,"end":492},"obj":"JJ"},{"id":"T1119","span":{"begin":493,"end":500},"obj":"JJ"},{"id":"T1120","span":{"begin":501,"end":504},"obj":"NN"},{"id":"T1121","span":{"begin":505,"end":511},"obj":"NN"},{"id":"T1122","span":{"begin":519,"end":520},"obj":"-RRB-"},{"id":"T1123","span":{"begin":520,"end":521},"obj":"."}],"relations":[{"id":"R21","pred":"nmod","subj":"T1029","obj":"T1031"},{"id":"R22","pred":"nmod","subj":"T1030","obj":"T1029"},{"id":"R23","pred":"nsubj","subj":"T1031","obj":"T1035"},{"id":"R24","pred":"punct","subj":"T1032","obj":"T1029"},{"id":"R25","pred":"appos","subj":"T1033","obj":"T1029"},{"id":"R26","pred":"punct","subj":"T1034","obj":"T1031"},{"id":"R34","pred":"auxpass","subj":"T1043","obj":"T1042"},{"id":"R37","pred":"pobj","subj":"T1046","obj":"T1044"},{"id":"R38","pred":"compound","subj":"T1047","obj":"T1048"},{"id":"R40","pred":"punct","subj":"T1049","obj":"T1048"},{"id":"R41","pred":"compound","subj":"T1050","obj":"T1046"},{"id":"R48","pred":"pobj","subj":"T1059","obj":"T1057"},{"id":"R49","pred":"amod","subj":"T1060","obj":"T1059"},{"id":"R56","pred":"pobj","subj":"T1067","obj":"T1064"},{"id":"R57","pred":"punct","subj":"T1068","obj":"T1066"},{"id":"R58","pred":"appos","subj":"T1069","obj":"T1066"},{"id":"R59","pred":"punct","subj":"T1070","obj":"T1067"},{"id":"R63","pred":"conj","subj":"T1074","obj":"T1067"},{"id":"R64","pred":"compound","subj":"T1075","obj":"T1074"},{"id":"R78","pred":"pobj","subj":"T1091","obj":"T1089"},{"id":"R79","pred":"amod","subj":"T1092","obj":"T1091"},{"id":"R80","pred":"compound","subj":"T1093","obj":"T1094"},{"id":"R81","pred":"npadvmod","subj":"T1094","obj":"T1095"},{"id":"R83","pred":"punct","subj":"T1096","obj":"T1095"},{"id":"R86","pred":"relcl","subj":"T1099","obj":"T1091"},{"id":"R87","pred":"auxpass","subj":"T1100","obj":"T1099"},{"id":"R88","pred":"advmod","subj":"T1101","obj":"T1099"},{"id":"R94","pred":"conj","subj":"T1107","obj":"T1104"},{"id":"R95","pred":"amod","subj":"T1108","obj":"T1107"},{"id":"R100","pred":"oprd","subj":"T1113","obj":"T1111"},{"id":"R101","pred":"compound","subj":"T1114","obj":"T1113"},{"id":"R102","pred":"punct","subj":"T1115","obj":"T1113"},{"id":"R104","pred":"parataxis","subj":"T1117","obj":"T1113"},{"id":"R105","pred":"amod","subj":"T1118","obj":"T1117"},{"id":"R106","pred":"amod","subj":"T1119","obj":"T1117"},{"id":"R107","pred":"compound","subj":"T1120","obj":"T1121"},{"id":"R108","pred":"compound","subj":"T1121","obj":"T1117"},{"id":"R51","pred":"pobj","subj":"T1062","obj":"T1061"},{"id":"R20","pred":"amod","subj":"T1028","obj":"T1029"},{"id":"R27","pred":"punct","subj":"T1036","obj":"T1037"},{"id":"R28","pred":"nummod","subj":"T1037","obj":"T1038"},{"id":"R29","pred":"npadvmod","subj":"T1038","obj":"T1039"},{"id":"R30","pred":"acomp","subj":"T1039","obj":"T1035"},{"id":"R31","pred":"cc","subj":"T1040","obj":"T1035"},{"id":"R32","pred":"aux","subj":"T1041","obj":"T1042"},{"id":"R35","pred":"prep","subj":"T1044","obj":"T1042"},{"id":"R36","pred":"amod","subj":"T1045","obj":"T1046"},{"id":"R39","pred":"compound","subj":"T1048","obj":"T1050"},{"id":"R42","pred":"punct","subj":"T1051","obj":"T1035"},{"id":"R43","pred":"det","subj":"T1053","obj":"T1054"},{"id":"R44","pred":"nsubjpass","subj":"T1054","obj":"T1055"},{"id":"R45","pred":"auxpass","subj":"T1056","obj":"T1055"},{"id":"R46","pred":"prep","subj":"T1057","obj":"T1055"},{"id":"R47","pred":"det","subj":"T1058","obj":"T1059"},{"id":"R50","pred":"prep","subj":"T1061","obj":"T1059"},{"id":"R52","pred":"punct","subj":"T1063","obj":"T1059"},{"id":"R53","pred":"prep","subj":"T1064","obj":"T1059"},{"id":"R54","pred":"nmod","subj":"T1065","obj":"T1066"},{"id":"R55","pred":"nmod","subj":"T1066","obj":"T1067"},{"id":"R60","pred":"cc","subj":"T1071","obj":"T1067"},{"id":"R61","pred":"compound","subj":"T1072","obj":"T1073"},{"id":"R62","pred":"compound","subj":"T1073","obj":"T1074"},{"id":"R65","pred":"punct","subj":"T1076","obj":"T1055"},{"id":"R66","pred":"prep","subj":"T1078","obj":"T1079"},{"id":"R67","pred":"det","subj":"T1080","obj":"T1081"},{"id":"R68","pred":"pobj","subj":"T1081","obj":"T1078"},{"id":"R69","pred":"punct","subj":"T1082","obj":"T1079"},{"id":"R70","pred":"nsubj","subj":"T1083","obj":"T1079"},{"id":"R71","pred":"det","subj":"T1084","obj":"T1085"},{"id":"R72","pred":"dobj","subj":"T1085","obj":"T1079"},{"id":"R73","pred":"cc","subj":"T1086","obj":"T1085"},{"id":"R74","pred":"amod","subj":"T1087","obj":"T1088"},{"id":"R75","pred":"conj","subj":"T1088","obj":"T1085"},{"id":"R76","pred":"prep","subj":"T1089","obj":"T1085"},{"id":"R77","pred":"det","subj":"T1090","obj":"T1091"},{"id":"R82","pred":"amod","subj":"T1095","obj":"T1091"},{"id":"R84","pred":"punct","subj":"T1097","obj":"T1091"},{"id":"R85","pred":"dep","subj":"T1098","obj":"T1099"},{"id":"R89","pred":"prep","subj":"T1102","obj":"T1099"},{"id":"R90","pred":"amod","subj":"T1103","obj":"T1104"},{"id":"R91","pred":"pobj","subj":"T1104","obj":"T1102"},{"id":"R92","pred":"cc","subj":"T1105","obj":"T1104"},{"id":"R93","pred":"det","subj":"T1106","obj":"T1107"},{"id":"R96","pred":"cc","subj":"T1109","obj":"T1099"},{"id":"R97","pred":"auxpass","subj":"T1110","obj":"T1111"},{"id":"R98","pred":"conj","subj":"T1111","obj":"T1099"},{"id":"R99","pred":"compound","subj":"T1112","obj":"T1113"},{"id":"R103","pred":"punct","subj":"T1116","obj":"T1117"},{"id":"R109","pred":"punct","subj":"T1122","obj":"T1117"},{"id":"R110","pred":"punct","subj":"T1123","obj":"T1079"},{"id":"R33","pred":"conj","subj":"T1042","obj":"T1035"}],"text":"Background\nSterile alpha motif (SAM) domains are ~70 residues long and have been reported as common protein-protein interaction modules. This domain is found in a large number of proteins, including Polycomb group (PcG) proteins and ETS family transcription factors. In this work, we report the cloning and functional characterization of a novel SAM domain-containing protein, which is predominantly expressed in retinal photoreceptors and the pineal gland and is designated mouse mr-s (major retinal SAM domain protein)."}