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2_test

Id Subject Object Predicate Lexical cue
16462943-9887104-85760970 188-190 9887104 denotes 22
16462943-12384402-85760971 395-397 12384402 denotes 23
16462943-9887104-85760972 602-604 9887104 denotes 22
16462943-9887104-85760973 755-757 9887104 denotes 22
16462943-2251502-85760974 980-982 2251502 denotes 24
16462943-12324650-85760975 983-985 12324650 denotes 25
16462943-10192336-85760976 1071-1073 10192336 denotes 26
16462943-2251502-85760977 1165-1167 2251502 denotes 24
16462943-12324650-85760978 1168-1170 12324650 denotes 25
T95179 188-190 9887104 denotes 22
T53294 395-397 12384402 denotes 23
T97722 602-604 9887104 denotes 22
T37501 755-757 9887104 denotes 22
T20450 980-982 2251502 denotes 24
T67689 983-985 12324650 denotes 25
T67355 1071-1073 10192336 denotes 26
T4658 1165-1167 2251502 denotes 24
T38161 1168-1170 12324650 denotes 25

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2353 1170-1171 -RRB- denotes ]
T2352 1165-1170 CD denotes 24,25
T2351 1164-1165 -LRB- denotes [
T2350 1160-1163 NN denotes LCR
T2349 1156-1159 DT denotes the
T2348 1152-1155 IN denotes for
T2347 1140-1151 NN denotes competition
T2346 1131-1139 NN denotes promoter
T2345 1128-1130 IN denotes by
T2344 1117-1127 VB denotes controlled
T2343 1114-1116 VB denotes is
T2342 1107-1113 NN denotes switch
T2341 1098-1106 JJ denotes β-globin
T2340 1092-1097 JJ denotes adult
T2339 1089-1091 TO denotes to
T2338 1080-1088 NN denotes γ-globin
T2337 1076-1079 DT denotes The
T2336 1073-1074 -RRB- denotes ]
T2335 1071-1073 CD denotes 26
T2334 1070-1071 -LRB- denotes [
T2333 1056-1069 RB denotes competitively
T2332 1046-1055 VB denotes regulated
T2331 1043-1045 VB denotes be
T2330 1040-1042 TO denotes to
T2329 1032-1039 VB denotes appears
T2328 1027-1031 RB denotes also
T2327 1025-1026 NN denotes ɛ
T2326 1010-1024 NN denotes erythropoiesis
T2325 1000-1009 JJ denotes primitive
T2324 997-999 IN denotes in
T2323 988-996 IN denotes although
T2322 986-987 -COMMA- denotes ,
T2321 985-986 -RRB- denotes ]
T2320 980-985 CD denotes 24,25
T2319 979-980 -LRB- denotes [
T2318 966-978 RB denotes autonomously
T2317 957-965 VB denotes silenced
T2316 953-956 CC denotes and
T2315 943-952 VB denotes activated
T2314 940-942 VB denotes is
T2313 938-939 NN denotes ɛ
T2312 936-937 -COMMA- denotes ,
T2311 922-936 NN denotes erythropoiesis
T2310 911-921 JJ denotes definitive
T2309 908-910 IN denotes In
T2308 895-906 RB denotes extensively
T2307 887-894 VB denotes studied
T2306 882-886 VB denotes been
T2305 878-881 VB denotes has
T2304 876-877 -COMMA- denotes ,
T2303 870-876 NN denotes globin
T2302 868-869 NN denotes ɛ
T2301 866-867 -COMMA- denotes ,
T2300 855-866 NN denotes counterpart
T2299 849-854 JJ denotes human
T2298 845-848 PRP-DOLLAR- denotes its
T2297 842-844 IN denotes of
T2296 832-841 NN denotes silencing
T2295 829-831 IN denotes of
T2294 819-828 NN denotes mechanism
T2293 815-818 DT denotes The
T2292 808-813 NN denotes cells
T2291 798-807 JJ denotes erythroid
T2290 787-797 JJ denotes definitive
T2289 784-786 IN denotes in
T2288 775-783 VB denotes silenced
T2287 772-774 VB denotes is
T2286 767-771 NN denotes gene
T2285 764-766 JJ denotes ɛy
T2284 760-763 DT denotes The
T2283 757-758 -RRB- denotes ]
T2282 755-757 CD denotes 22
T2281 754-755 -LRB- denotes [
T2280 752-753 -RRB- denotes )
T2279 747-752 JJ denotes minor
T2278 743-746 CC denotes and
T2277 737-742 JJ denotes major
T2276 735-736 VB denotes β
T2275 734-735 -LRB- denotes (
T2274 726-733 NN denotes globins
T2273 724-725 JJ denotes β
T2272 718-723 JJ denotes adult
T2271 710-717 VB denotes express
T2270 704-709 NN denotes cells
T2269 694-703 JJ denotes erythroid
T2268 683-693 JJ denotes definitive
T2267 677-682 WRB denotes where
T2266 671-676 NN denotes liver
T2265 665-670 JJ denotes fetal
T2264 661-664 DT denotes the
T2263 658-660 TO denotes to
T2262 651-657 NN denotes shifts
T2261 636-650 NN denotes erythropoiesis
T2260 634-635 -COMMA- denotes ,
T2259 633-634 -RRB- denotes )
T2258 630-633 NN denotes dpc
T2257 629-630 -LRB- denotes (
T2256 622-628 NN denotes coitus
T2255 617-621 NN denotes post
T2230 480-482 IN denotes In
T2229 471-478 NN denotes fashion
T2228 450-470 JJ denotes development-specific
T2227 446-449 CC denotes and
T2226 438-445 NN denotes tissue-
T2225 436-437 DT denotes a
T2224 433-435 IN denotes in
T2223 423-432 VB denotes expressed
T2222 419-422 VB denotes are
T2221 413-418 NN denotes genes
T2220 404-412 JJ denotes β-globin
T2219 400-403 DT denotes The
T2218 397-398 -RRB- denotes ]
T2217 395-397 CD denotes 23
T2216 394-395 -LRB- denotes [
T2215 389-393 NN denotes gene
T2214 386-388 JJ denotes ɛy
T2213 382-385 DT denotes the
T2212 379-381 IN denotes of
T2211 376-378 NN denotes 5′
T2210 368-375 JJ denotes located
T2209 365-367 NN denotes kb
T2208 362-364 CD denotes 25
T2207 357-361 IN denotes over
T2206 350-356 VB denotes spread
T2205 344-349 NN denotes sites
T2204 329-343 JJ denotes hypersensitive
T2203 320-328 NN denotes nuclease
T2202 317-319 IN denotes of
T2201 313-316 NN denotes set
T2200 311-312 DT denotes a
T2199 308-310 IN denotes by
T2198 294-307 VB denotes characterized
T2197 291-293 VB denotes is
T2196 286-290 WDT denotes that
T2195 279-285 NN denotes region
T2194 271-278 NN denotes control
T2193 265-270 NN denotes locus
T2192 261-264 DT denotes the
T2191 259-260 -COMMA- denotes ,
T2190 252-259 NN denotes element
T2189 241-251 JJ denotes regulatory
T2188 239-240 DT denotes a
T2187 230-238 VB denotes requires
T2186 224-229 NN denotes genes
T2185 218-223 DT denotes these
T2184 215-217 IN denotes of
T2183 204-214 NN denotes expression
T2182 193-203 JJ denotes High-level
T2181 190-191 -RRB- denotes ]
T2180 188-190 CD denotes 22
T2179 187-188 -LRB- denotes [
T2178 178-186 NN denotes function
T2177 174-177 CC denotes and
T2176 164-173 NN denotes structure
T2175 149-163 JJ denotes organizational
T2174 146-148 IN denotes in
T2173 133-145 NN denotes counterparts
T2172 127-132 JJ denotes human
T2171 121-126 PRP-DOLLAR- denotes their
T2170 118-120 TO denotes to
T2169 107-117 JJ denotes homologous
T2168 100-106 RB denotes highly
T2167 96-99 VB denotes are
T2166 91-95 PRP denotes they
T2165 87-90 CC denotes and
T2164 85-86 CD denotes 7
T2163 74-84 NN denotes Chromosome
T2162 71-73 IN denotes on
T2161 61-70 VB denotes clustered
T2160 57-60 VB denotes are
T2159 55-56 -RRB- denotes }
T2158 48-55 JJ denotes β-minor
T2157 44-47 CC denotes and
T2156 42-43 -COMMA- denotes ,
T2155 35-42 JJ denotes β-major
T2154 33-34 -COMMA- denotes ,
T2153 30-33 NN denotes βh1
T2152 28-29 -COMMA- denotes ,
T2151 26-28 NN denotes ɛy
T2150 25-26 -LRB- denotes {
T2149 19-24 NN denotes genes
T2148 10-18 NN denotes β-globin
T2147 4-9 NN denotes mouse
T2146 0-3 DT denotes The
T2254 615-616 NN denotes d
T2253 610-614 CD denotes 11.5
T2252 607-609 IN denotes At
T2251 604-605 -RRB- denotes ]
T2250 602-604 CD denotes 22
T2249 601-602 -LRB- denotes [
T2248 593-600 NN denotes globins
T2247 588-592 NN denotes βh-1
T2246 584-587 CC denotes and
T2245 581-583 JJ denotes ɛy
T2244 573-580 VB denotes express
T2243 567-572 NN denotes cells
T2242 557-566 JJ denotes erythroid
T2241 547-556 JJ denotes primitive
T2240 541-546 WRB denotes where
T2239 537-540 NN denotes sac
T2238 532-536 NN denotes yolk
T2237 522-531 JJ denotes embryonic
T2236 518-521 DT denotes the
T2235 515-517 IN denotes in
T2234 504-514 VB denotes originates
T2233 489-503 NN denotes erythropoiesis
T2232 487-488 -COMMA- denotes ,
T2231 483-487 NN denotes mice
R1266 T2149 T2146 arg1Of genes,The
R1267 T2149 T2147 arg1Of genes,mouse
R1268 T2149 T2148 arg1Of genes,β-globin
R1269 T2149 T2150 arg1Of genes,{
R1270 T2149 T2160 arg1Of genes,are
R1271 T2149 T2161 arg2Of genes,clustered
R1272 T2151 T2152 arg1Of ɛy,","
R1273 T2151 T2154 arg1Of ɛy,","
R1274 T2153 T2152 arg2Of βh1,","
R1275 T2154 T2150 arg2Of ",",{
R1276 T2155 T2157 arg1Of β-major,and
R1277 T2157 T2154 arg2Of and,","
R1278 T2157 T2156 arg1Of and,","
R1279 T2158 T2157 arg2Of β-minor,and
R1280 T2159 T2150 arg3Of },{
R1281 T2161 T2160 arg2Of clustered,are
R1282 T2161 T2162 arg1Of clustered,on
R1283 T2161 T2165 arg1Of clustered,and
R1284 T2163 T2162 arg2Of Chromosome,on
R1285 T2163 T2164 arg1Of Chromosome,7
R1286 T2166 T2167 arg1Of they,are
R1287 T2166 T2169 arg1Of they,homologous
R1288 T2167 T2165 arg2Of are,and
R1289 T2167 T2174 arg1Of are,in
R1290 T2167 T2179 arg1Of are,[
R1291 T2169 T2167 arg2Of homologous,are
R1292 T2169 T2168 arg1Of homologous,highly
R1293 T2169 T2170 arg1Of homologous,to
R1294 T2173 T2170 arg2Of counterparts,to
R1295 T2173 T2171 arg1Of counterparts,their
R1296 T2173 T2172 arg1Of counterparts,human
R1297 T2176 T2177 arg1Of structure,and
R1298 T2177 T2174 arg2Of and,in
R1299 T2177 T2175 arg1Of and,organizational
R1300 T2178 T2177 arg2Of function,and
R1301 T2180 T2179 arg2Of 22,[
R1302 T2181 T2179 arg3Of ],[
R1303 T2183 T2182 arg1Of expression,High-level
R1304 T2183 T2184 arg1Of expression,of
R1305 T2183 T2187 arg1Of expression,requires
R1306 T2186 T2184 arg2Of genes,of
R1307 T2186 T2185 arg1Of genes,these
R1308 T2190 T2187 arg2Of element,requires
R1309 T2190 T2188 arg1Of element,a
R1310 T2190 T2189 arg1Of element,regulatory
R1311 T2190 T2191 arg1Of element,","
R1312 T2270 T2268 arg1Of cells,definitive
R1313 T2270 T2269 arg1Of cells,erythroid
R1314 T2270 T2271 arg1Of cells,express
R1315 T2195 T2191 arg2Of region,","
R1316 T2271 T2267 arg2Of express,where
R1317 T2274 T2271 arg2Of globins,express
R1318 T2274 T2272 arg1Of globins,adult
R1319 T2274 T2273 arg1Of globins,β
R1320 T2276 T2252 arg1Of β,At
R1321 T2276 T2260 arg1Of β,","
R1322 T2276 T2275 arg1Of β,(
R1323 T2277 T2278 arg1Of major,and
R1324 T2195 T2192 arg1Of region,the
R1325 T2195 T2193 arg1Of region,locus
R1326 T2279 T2278 arg2Of minor,and
R1327 T2195 T2194 arg1Of region,control
R1328 T2195 T2196 arg1Of region,that
R1329 T2195 T2197 arg1Of region,is
R1330 T2282 T2276 arg2Of 22,β
R1331 T2282 T2277 arg1Of 22,major
R1332 T2282 T2279 arg1Of 22,minor
R1333 T2282 T2280 arg1Of 22,)
R1334 T2282 T2281 arg2Of 22,[
R1335 T2283 T2281 arg3Of ],[
R1336 T2195 T2198 arg2Of region,characterized
R1337 T2198 T2197 arg2Of characterized,is
R1338 T2286 T2284 arg1Of gene,The
R1339 T2286 T2285 arg1Of gene,ɛy
R1340 T2286 T2287 arg1Of gene,is
R1341 T2286 T2288 arg2Of gene,silenced
R1342 T2288 T2287 arg2Of silenced,is
R1343 T2288 T2289 arg1Of silenced,in
R1344 T2201 T2198 arg1Of set,characterized
R1345 T2292 T2289 arg2Of cells,in
R1346 T2292 T2290 arg1Of cells,definitive
R1347 T2292 T2291 arg1Of cells,erythroid
R1348 T2294 T2293 arg1Of mechanism,The
R1349 T2201 T2199 arg2Of set,by
R1350 T2201 T2200 arg1Of set,a
R1351 T2294 T2295 arg1Of mechanism,of
R1352 T2294 T2305 arg1Of mechanism,has
R1353 T2294 T2306 arg1Of mechanism,been
R1354 T2294 T2307 arg2Of mechanism,studied
R1355 T2296 T2295 arg2Of silencing,of
R1356 T2296 T2297 arg1Of silencing,of
R1357 T2300 T2297 arg2Of counterpart,of
R1358 T2300 T2298 arg1Of counterpart,its
R1359 T2300 T2299 arg1Of counterpart,human
R1360 T2300 T2301 arg1Of counterpart,","
R1361 T2201 T2202 arg1Of set,of
R1362 T2205 T2202 arg2Of sites,of
R1363 T2303 T2301 arg2Of globin,","
R1364 T2303 T2302 arg1Of globin,ɛ
R1365 T2307 T2304 arg1Of studied,","
R1366 T2307 T2305 arg2Of studied,has
R1367 T2307 T2306 arg2Of studied,been
R1368 T2307 T2308 arg1Of studied,extensively
R1369 T2205 T2203 arg1Of sites,nuclease
R1370 T2311 T2309 arg2Of erythropoiesis,In
R1371 T2311 T2310 arg1Of erythropoiesis,definitive
R1372 T2205 T2204 arg1Of sites,hypersensitive
R1373 T2205 T2206 arg2Of sites,spread
R1374 T2313 T2314 arg1Of ɛ,is
R1375 T2313 T2315 arg2Of ɛ,activated
R1376 T2313 T2317 arg2Of ɛ,silenced
R1377 T2206 T2207 arg1Of spread,over
R1378 T2315 T2316 arg1Of activated,and
R1379 T2316 T2309 arg1Of and,In
R1380 T2316 T2312 arg1Of and,","
R1381 T2316 T2314 arg2Of and,is
R1382 T2316 T2319 arg1Of and,[
R1383 T2316 T2322 arg1Of and,","
R1384 T2316 T2323 arg1Of and,although
R1385 T2317 T2316 arg2Of silenced,and
R1386 T2317 T2318 arg1Of silenced,autonomously
R1387 T2206 T2216 arg1Of spread,[
R1388 T2320 T2319 arg2Of "24,25",[
R1389 T2211 T2207 arg2Of 5′,over
R1390 T2321 T2319 arg3Of ],[
R1391 T2326 T2324 arg2Of erythropoiesis,in
R1392 T2326 T2325 arg1Of erythropoiesis,primitive
R1393 T2327 T2329 arg1Of ɛ,appears
R1394 T2327 T2331 arg1Of ɛ,be
R1395 T2211 T2208 arg1Of 5′,25
R1396 T2327 T2332 arg2Of ɛ,regulated
R1397 T2211 T2209 arg1Of 5′,kb
R1398 T2329 T2323 arg2Of appears,although
R1399 T2329 T2324 arg1Of appears,in
R1400 T2329 T2328 arg1Of appears,also
R1401 T2211 T2210 arg1Of 5′,located
R1402 T2211 T2212 arg1Of 5′,of
R1403 T2332 T2329 arg2Of regulated,appears
R1404 T2332 T2330 arg1Of regulated,to
R1405 T2332 T2331 arg2Of regulated,be
R1406 T2332 T2333 arg1Of regulated,competitively
R1407 T2332 T2334 arg1Of regulated,[
R1408 T2335 T2334 arg2Of 26,[
R1409 T2336 T2334 arg3Of ],[
R1410 T2215 T2212 arg2Of gene,of
R1411 T2338 T2337 arg1Of γ-globin,The
R1412 T2338 T2339 arg1Of γ-globin,to
R1413 T2338 T2343 arg1Of γ-globin,is
R1414 T2338 T2344 arg2Of γ-globin,controlled
R1415 T2342 T2339 arg2Of switch,to
R1416 T2342 T2340 arg1Of switch,adult
R1417 T2342 T2341 arg1Of switch,β-globin
R1418 T2344 T2343 arg2Of controlled,is
R1419 T2344 T2351 arg1Of controlled,[
R1420 T2215 T2213 arg1Of gene,the
R1421 T2215 T2214 arg1Of gene,ɛy
R1422 T2347 T2344 arg1Of competition,controlled
R1423 T2347 T2345 arg2Of competition,by
R1424 T2347 T2346 arg1Of competition,promoter
R1425 T2347 T2348 arg1Of competition,for
R1426 T2217 T2216 arg2Of 23,[
R1427 T2350 T2348 arg2Of LCR,for
R1428 T2350 T2349 arg1Of LCR,the
R1429 T2352 T2351 arg2Of "24,25",[
R1430 T2218 T2216 arg3Of ],[
R1431 T2353 T2351 arg3Of ],[
R1432 T2221 T2219 arg1Of genes,The
R1440 T2221 T2220 arg1Of genes,β-globin
R1442 T2221 T2222 arg1Of genes,are
R1443 T2221 T2223 arg2Of genes,expressed
R1444 T2223 T2222 arg2Of expressed,are
R1452 T2223 T2224 arg1Of expressed,in
R1453 T2226 T2227 arg1Of tissue-,and
R1454 T2228 T2227 arg2Of development-specific,and
R1460 T2229 T2224 arg2Of fashion,in
R1464 T2229 T2225 arg1Of fashion,a
R1467 T2229 T2226 arg1Of fashion,tissue-
R1468 T2229 T2228 arg1Of fashion,development-specific
R1469 T2231 T2230 arg2Of mice,In
R1475 T2233 T2234 arg1Of erythropoiesis,originates
R1477 T2234 T2230 arg1Of originates,In
R1479 T2234 T2232 arg1Of originates,","
R1480 T2234 T2235 arg1Of originates,in
R1481 T2239 T2235 arg2Of sac,in
R1490 T2239 T2236 arg1Of sac,the
R1494 T2239 T2237 arg1Of sac,embryonic
R1495 T2239 T2238 arg1Of sac,yolk
R1496 T2239 T2240 arg1Of sac,where
R1505 T2243 T2241 arg1Of cells,primitive
R1517 T2243 T2242 arg1Of cells,erythroid
R1518 T2243 T2244 arg1Of cells,express
R1519 T2244 T2240 arg2Of express,where
R1522 T2244 T2249 arg1Of express,[
R1531 T2245 T2246 arg1Of ɛy,and
R1533 T2247 T2246 arg2Of βh-1,and
R1539 T2248 T2244 arg2Of globins,express
R1546 T2248 T2245 arg1Of globins,ɛy
R1547 T2248 T2247 arg1Of globins,βh-1
R1549 T2250 T2249 arg2Of 22,[
R1554 T2251 T2249 arg3Of ],[
R1559 T2256 T2252 arg2Of coitus,At
R1572 T2256 T2253 arg1Of coitus,11.5
R1576 T2256 T2254 arg1Of coitus,d
R1578 T2256 T2255 arg1Of coitus,post
R1581 T2256 T2257 arg1Of coitus,(
R1582 T2258 T2257 arg2Of dpc,(
R1588 T2259 T2257 arg3Of ),(
R1589 T2262 T2261 arg1Of shifts,erythropoiesis
R1592 T2262 T2263 arg1Of shifts,to
R1593 T2262 T2267 arg1Of shifts,where
R1594 T2262 T2276 arg1Of shifts,β
R1595 T2266 T2263 arg2Of liver,to
R1596 T2266 T2264 arg1Of liver,the
R1597 T2266 T2265 arg1Of liver,fetal

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T1410 724-733 Anaphor denotes β globins
T1409 48-55 Antecedent denotes β-minor
T1408 35-42 Antecedent denotes β-major
T1407 30-33 Antecedent denotes βh1
T1406 26-28 Antecedent denotes ɛy
T1405 218-229 Anaphor denotes these genes
T1412 735-742 Antecedent denotes β major
T1411 747-752 Antecedent denotes minor
R746 T1405 T1406 boundBy these genes,ɛy
R747 T1405 T1407 boundBy these genes,βh1
R748 T1405 T1408 boundBy these genes,β-major
R749 T1405 T1409 boundBy these genes,β-minor
R750 T1410 T1411 boundBy β globins,minor
R751 T1410 T1412 boundBy β globins,β major

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1447 1098-1106 Protein denotes β-globin
T1446 1080-1088 Protein denotes γ-globin
T1445 1025-1026 Protein denotes ɛ
T1444 938-939 Protein denotes ɛ
T1443 868-876 Protein denotes ɛ globin
T1442 764-766 Protein denotes ɛy
T1441 747-752 Protein denotes minor
T1440 735-742 Protein denotes β major
T1439 588-600 Protein denotes βh-1 globins
T1438 581-583 Protein denotes ɛy
T1437 386-388 Protein denotes ɛy
T1436 48-55 Protein denotes β-minor
T1435 35-42 Protein denotes β-major
T1434 30-33 Protein denotes βh1
T1433 26-28 Protein denotes ɛy

GO-BP

Id Subject Object Predicate Lexical cue
T1288 1000-1024 http://purl.obolibrary.org/obo/GO_0060319 denotes primitive erythropoiesis
T1286 911-936 http://purl.obolibrary.org/obo/GO_0060318 denotes definitive erythropoiesis
T1285 767-783 http://purl.obolibrary.org/obo/GO_0016458 denotes gene is silenced
T1282 1010-1024 http://purl.obolibrary.org/obo/GO_0030218 denotes erythropoiesis
T1281 922-936 http://purl.obolibrary.org/obo/GO_0030218 denotes erythropoiesis
T1280 636-650 http://purl.obolibrary.org/obo/GO_0030218 denotes erythropoiesis
T1279 489-503 http://purl.obolibrary.org/obo/GO_0030218 denotes erythropoiesis
T1278 438-461 http://purl.obolibrary.org/obo/GO_0009888 denotes tissue- and development
T1277 329-343 http://purl.obolibrary.org/obo/GO_0002524 denotes hypersensitive
T1269 1100-1106 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T1268 1082-1088 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T1267 870-876 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T1266 406-412 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T1265 12-18 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T1256 450-461 http://purl.obolibrary.org/obo/GO_0032502 denotes development
T1254 204-229 http://purl.obolibrary.org/obo/GO_0010467 denotes expression of these genes

GO-MF

Id Subject Object Predicate Lexical cue
T1471 12-18 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T1475 1100-1106 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T1474 1082-1088 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T1473 870-876 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T1472 406-412 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-CC

Id Subject Object Predicate Lexical cue
T1496 532-536 http://purl.obolibrary.org/obo/GO_0060417 denotes yolk
T1495 74-84 http://purl.obolibrary.org/obo/GO_0005694 denotes Chromosome

sentences

Id Subject Object Predicate Lexical cue
T1221 908-1075 Sentence denotes In definitive erythropoiesis, ɛ is activated and silenced autonomously [24,25], although in primitive erythropoiesis ɛ also appears to be regulated competitively [26].
T1222 1076-1172 Sentence denotes The γ-globin to adult β-globin switch is controlled by promoter competition for the LCR [24,25].
T1220 815-907 Sentence denotes The mechanism of silencing of its human counterpart, ɛ globin, has been studied extensively.
T1219 760-814 Sentence denotes The ɛy gene is silenced in definitive erythroid cells.
T1218 607-759 Sentence denotes At 11.5 d post coitus (dpc), erythropoiesis shifts to the fetal liver where definitive erythroid cells express adult β globins (β major and minor) [22].
T1217 480-606 Sentence denotes In mice, erythropoiesis originates in the embryonic yolk sac where primitive erythroid cells express ɛy and βh-1 globins [22].
T1216 400-479 Sentence denotes The β-globin genes are expressed in a tissue- and development-specific fashion.
T1215 193-399 Sentence denotes High-level expression of these genes requires a regulatory element, the locus control region that is characterized by a set of nuclease hypersensitive sites spread over 25 kb located 5′ of the ɛy gene [23].
T1214 0-192 Sentence denotes The mouse β-globin genes {ɛy, βh1, β-major, and β-minor} are clustered on Chromosome 7 and they are highly homologous to their human counterparts in organizational structure and function [22].
T34 0-192 Sentence denotes The mouse β-globin genes {ɛy, βh1, β-major, and β-minor} are clustered on Chromosome 7 and they are highly homologous to their human counterparts in organizational structure and function [22].
T35 193-399 Sentence denotes High-level expression of these genes requires a regulatory element, the locus control region that is characterized by a set of nuclease hypersensitive sites spread over 25 kb located 5′ of the ɛy gene [23].
T36 400-479 Sentence denotes The β-globin genes are expressed in a tissue- and development-specific fashion.
T37 480-606 Sentence denotes In mice, erythropoiesis originates in the embryonic yolk sac where primitive erythroid cells express ɛy and βh-1 globins [22].
T38 607-759 Sentence denotes At 11.5 d post coitus (dpc), erythropoiesis shifts to the fetal liver where definitive erythroid cells express adult β globins (β major and minor) [22].
T39 760-814 Sentence denotes The ɛy gene is silenced in definitive erythroid cells.
T40 815-907 Sentence denotes The mechanism of silencing of its human counterpart, ɛ globin, has been studied extensively.
T41 908-1075 Sentence denotes In definitive erythropoiesis, ɛ is activated and silenced autonomously [24,25], although in primitive erythropoiesis ɛ also appears to be regulated competitively [26].
T42 1076-1172 Sentence denotes The γ-globin to adult β-globin switch is controlled by promoter competition for the LCR [24,25].

simple1

Id Subject Object Predicate Lexical cue
T1674 1098-1106 Protein denotes β-globin
T1673 1080-1088 Protein denotes γ-globin
T1672 1025-1026 Protein denotes ɛ
T1671 938-939 Protein denotes ɛ
T1670 868-876 Protein denotes ɛ globin
T1669 764-766 Protein denotes ɛy
T1668 747-752 Protein denotes minor
T1667 735-742 Protein denotes β major
T1666 588-600 Protein denotes βh-1 globins
T1665 581-583 Protein denotes ɛy
T1664 386-388 Protein denotes ɛy
T1663 48-55 Protein denotes β-minor
T1662 35-42 Protein denotes β-major
T1661 30-33 Protein denotes βh1
T1660 26-28 Protein denotes ɛy

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4286 1117-1127 Regulation denotes controlled
T4285 943-952 Positive_regulation denotes activated
T4284 1046-1055 Regulation denotes regulated
T4283 832-841 Negative_regulation denotes silencing
T4282 775-783 Negative_regulation denotes silenced
T4281 710-717 Gene_expression denotes express
T4280 573-580 Gene_expression denotes express
T4252 1098-1106 Protein denotes β-globin
T4251 1080-1088 Protein denotes γ-globin
T4250 1025-1026 Protein denotes ɛ
T4249 938-939 Protein denotes ɛ
T4248 868-876 Protein denotes ɛ globin
T4247 764-766 Protein denotes ɛy
T4246 747-752 Protein denotes minor
T4245 735-742 Protein denotes β major
T4244 588-600 Protein denotes βh-1 globins
T4243 581-583 Protein denotes ɛy
T4242 386-388 Protein denotes ɛy
T4241 48-55 Protein denotes β-minor
T4240 35-42 Protein denotes β-major
T4239 30-33 Protein denotes βh1
T4238 26-28 Protein denotes ɛy
R3034 T4243 T4280 themeOf ɛy,express
R3035 T4244 T4280 themeOf βh-1 globins,express
R3036 T4245 T4281 themeOf β major,express
R3037 T4246 T4281 themeOf minor,express
R3038 T4247 T4282 themeOf ɛy,silenced
R3039 T4248 T4283 themeOf ɛ globin,silencing
R3040 T4249 T4285 themeOf ɛ,activated
R3041 T4250 T4284 themeOf ɛ,regulated
R3042 T4251 T4286 themeOf γ-globin,controlled

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2748 943-952 Positive_regulation denotes activated
T2747 832-841 Negative_regulation denotes silencing
T2746 775-783 Negative_regulation denotes silenced
T2745 710-717 Gene_expression denotes express
T2744 573-580 Gene_expression denotes express
T2703 30-33 Protein denotes βh1
T2702 26-28 Protein denotes ɛy
T2716 1098-1106 Protein denotes β-globin
T2715 1080-1088 Protein denotes γ-globin
T2714 1025-1026 Protein denotes ɛ
T2713 938-939 Protein denotes ɛ
T2712 868-876 Protein denotes ɛ globin
T2711 764-766 Protein denotes ɛy
T2710 747-752 Protein denotes minor
T2709 735-742 Protein denotes β major
T2708 588-600 Protein denotes βh-1 globins
T2707 581-583 Protein denotes ɛy
T2706 386-388 Protein denotes ɛy
T2705 48-55 Protein denotes β-minor
T2704 35-42 Protein denotes β-major
R1802 T2707 T2744 themeOf ɛy,express
R1805 T2710 T2745 themeOf minor,express
R1808 T2711 T2746 themeOf ɛy,silenced
R1809 T2712 T2747 themeOf ɛ globin,silencing
R1811 T2713 T2748 themeOf ɛ,activated

DLUT931

Id Subject Object Predicate Lexical cue
T2829 1046-1055 Regulation denotes regulated
T2828 957-965 Negative_regulation denotes silenced
T2827 943-952 Positive_regulation denotes activated
T2826 832-841 Negative_regulation denotes silencing
T2825 775-783 Negative_regulation denotes silenced
T2824 710-717 Gene_expression denotes express
T2823 573-580 Gene_expression denotes express
T2794 1098-1106 Protein denotes β-globin
T2793 1080-1088 Protein denotes γ-globin
T2792 1025-1026 Protein denotes ɛ
T2791 938-939 Protein denotes ɛ
T2790 868-876 Protein denotes ɛ globin
T2789 764-766 Protein denotes ɛy
T2788 747-752 Protein denotes minor
T2787 735-742 Protein denotes β major
T2786 588-600 Protein denotes βh-1 globins
T2785 581-583 Protein denotes ɛy
T2784 386-388 Protein denotes ɛy
T2783 48-55 Protein denotes β-minor
T2782 35-42 Protein denotes β-major
T2781 30-33 Protein denotes βh1
T2780 26-28 Protein denotes ɛy
R1862 T2786 T2823 themeOf βh-1 globins,express
R1864 T2788 T2824 themeOf minor,express
R1869 T2791 T2828 themeOf ɛ,silenced
R1871 T2792 T2829 themeOf ɛ,regulated
R1861 T2785 T2823 themeOf ɛy,express
R1863 T2787 T2824 themeOf β major,express
R1865 T2789 T2825 themeOf ɛy,silenced
R1867 T2790 T2826 themeOf ɛ globin,silencing
R1868 T2791 T2827 themeOf ɛ,activated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4122 320-343 Protein denotes nuclease hypersensitive
T4121 868-869 Protein denotes ɛ
T4118 683-709 Entity denotes definitive erythroid cells
T4113 547-572 Entity denotes primitive erythroid cells
T4109 48-56 Protein denotes β-minor}
T4108 215-229 Protein denotes of these genes
T4106 1156-1163 Protein denotes the LCR
T4091 581-600 Protein denotes ɛy and βh-1 globins
T4085 30-33 Protein denotes βh1
T4082 735-742 Protein denotes β major
T4081 0-26 Protein denotes The mouse β-globin genes {
T4075 1092-1113 Protein denotes adult β-globin switch
T4073 581-583 Protein denotes ɛy
T4069 938-939 Protein denotes ɛ
T4068 868-876 Protein denotes ɛ globin
T4058 61-84 Entity denotes clustered on Chromosome
T4057 1076-1088 Protein denotes The γ-globin
T4051 518-531 Protein denotes the embryonic
T4048 26-28 Protein denotes ɛy
T4044 532-536 Entity denotes yolk
T4042 630-633 Entity denotes dpc
T4037 382-398 Protein denotes the ɛy gene [23]
T4218 193-229 Gene_expression denotes High-level expression of these genes
T4214 938-952 Positive_regulation denotes ɛ is activated
T4208 61-84 Binding denotes clustered on Chromosome
T4206 661-753 Gene_expression denotes the fetal liver where definitive erythroid cells express adult β globins (β major and minor)
T4204 480-531 Positive_regulation denotes In mice, erythropoiesis originates in the embryonic
T4203 400-478 Gene_expression denotes The β-globin genes are expressed in a tissue- and development-specific fashion
T4201 541-600 Gene_expression denotes where primitive erythroid cells express ɛy and βh-1 globins
T4200 760-813 Negative_regulation denotes The ɛy gene is silenced in definitive erythroid cells
T4188 0-26 Protein denotes The mouse β-globin genes {
T4182 532-605 Entity denotes yolk sac where primitive erythroid cells express ɛy and βh-1 globins [22]
T4180 747-752 Protein denotes minor
T4148 400-418 Protein denotes The β-globin genes
T4145 588-592 Protein denotes βh-1
T4141 35-42 Protein denotes β-major
T4138 382-398 Protein denotes the ɛy gene [23]
T4135 718-733 Protein denotes adult β globins
T4132 760-771 Protein denotes The ɛy gene
T4131 787-813 Entity denotes definitive erythroid cells
T4126 1128-1139 Entity denotes by promoter
T4155 320-356 Entity denotes nuclease hypersensitive sites spread
T4153 400-418 Protein denotes The β-globin genes
T4152 1092-1113 Entity denotes adult β-globin switch
T4169 1025-1026 Protein denotes ɛ
T4165 483-487 Protein denotes mice
T4163 764-766 Protein denotes ɛy
R2980 T4051 T4204 themeOf the embryonic,"In mice, erythropoiesis originates in the embryonic"
R2988 T4058 T4208 themeOf clustered on Chromosome,clustered on Chromosome
R3001 T4069 T4214 themeOf ɛ,ɛ is activated
R3009 T4132 T4200 themeOf The ɛy gene,The ɛy gene is silenced in definitive erythroid cells
R3012 T4135 T4206 themeOf adult β globins,the fetal liver where definitive erythroid cells express adult β globins (β major and minor)
R3014 T4091 T4201 themeOf ɛy and βh-1 globins,where primitive erythroid cells express ɛy and βh-1 globins
R3017 T4148 T4203 themeOf The β-globin genes,The β-globin genes are expressed in a tissue- and development-specific fashion
R3020 T4108 T4218 themeOf of these genes,High-level expression of these genes

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3499 633-634 -RRB- denotes )
T3498 630-633 FW denotes dpc
T3497 629-630 -LRB- denotes (
T3496 622-628 NN denotes coitus
T3495 617-621 NN denotes post
T3494 615-616 LS denotes d
T3493 610-614 CD denotes 11.5
T3492 607-609 IN denotes At
T3491 605-606 . denotes .
T3490 604-605 NNP denotes ]
T3489 602-604 CD denotes 22
T3488 601-602 NNP denotes [
T3487 593-600 NNS denotes globins
T3486 588-592 JJ denotes βh-1
T3485 584-587 CC denotes and
T3484 581-583 NN denotes ɛy
T3483 573-580 VBP denotes express
T3482 567-572 NNS denotes cells
T3481 557-566 JJ denotes erythroid
T3480 547-556 JJ denotes primitive
T3479 541-546 WRB denotes where
T3478 537-540 NN denotes sac
T3477 532-536 NN denotes yolk
T3476 522-531 JJ denotes embryonic
T3475 518-521 DT denotes the
T3474 515-517 IN denotes in
T3473 504-514 VBZ denotes originates
T3472 489-503 VBZ denotes erythropoiesis
T3471 487-488 , denotes ,
T3470 483-487 NNS denotes mice
T3469 480-482 IN denotes In
T3468 478-479 . denotes .
T3467 471-478 NN denotes fashion
T3466 450-470 JJ denotes development-specific
T3465 446-449 CC denotes and
T3464 444-445 : denotes -
T3463 438-444 NN denotes tissue
T3462 436-437 DT denotes a
T3461 433-435 IN denotes in
T3460 423-432 VBN denotes expressed
T3459 419-422 VBP denotes are
T3458 413-418 NNS denotes genes
T3457 404-412 JJ denotes β-globin
T3456 400-403 DT denotes The
T3455 398-399 . denotes .
T3454 397-398 NNP denotes ]
T3453 395-397 CD denotes 23
T3452 394-395 NNP denotes [
T3451 389-393 NN denotes gene
T3450 386-388 JJ denotes ɛy
T3449 382-385 DT denotes the
T3448 379-381 IN denotes of
T3447 377-378 NN denotes ′
T3446 376-377 CD denotes 5
T3445 368-375 VBN denotes located
T3444 365-367 NN denotes kb
T3443 362-364 CD denotes 25
T3442 357-361 IN denotes over
T3441 350-356 VBN denotes spread
T3440 344-349 NNS denotes sites
T3439 329-343 JJ denotes hypersensitive
T3438 320-328 NN denotes nuclease
T3437 317-319 IN denotes of
T3436 313-316 NN denotes set
T3435 311-312 DT denotes a
T3434 308-310 IN denotes by
T3433 294-307 VBN denotes characterized
T3432 291-293 VBZ denotes is
T3431 286-290 WDT denotes that
T3430 279-285 NN denotes region
T3429 271-278 NN denotes control
T3428 265-270 NN denotes locus
T3427 261-264 DT denotes the
T3426 259-260 , denotes ,
T3425 252-259 NN denotes element
T3424 241-251 JJ denotes regulatory
T3423 239-240 DT denotes a
T3422 230-238 VBZ denotes requires
T3421 224-229 NNS denotes genes
T3420 218-223 DT denotes these
T3419 215-217 IN denotes of
T3418 204-214 NN denotes expression
T3417 193-203 JJ denotes High-level
T3416 191-192 . denotes .
T3415 190-191 NNP denotes ]
T3414 188-190 CD denotes 22
T3413 187-188 NNP denotes [
T3412 178-186 NN denotes function
T3411 174-177 CC denotes and
T3410 164-173 NN denotes structure
T3409 149-163 JJ denotes organizational
T3408 146-148 IN denotes in
T3407 133-145 NNS denotes counterparts
T3406 127-132 JJ denotes human
T3405 121-126 PRP$ denotes their
T3404 118-120 TO denotes to
T3403 107-117 RB denotes homologous
T3402 100-106 RB denotes highly
T3401 96-99 VBP denotes are
T3400 91-95 PRP denotes they
T3399 87-90 CC denotes and
T3398 85-86 CD denotes 7
T3397 74-84 NN denotes Chromosome
T3396 71-73 IN denotes on
T3395 61-70 VBN denotes clustered
T3394 57-60 VBP denotes are
T3393 48-55 JJ denotes β-minor
T3392 44-47 CC denotes and
T3391 42-43 , denotes ,
T3390 35-42 NN denotes β-major
T3389 33-34 , denotes ,
T3388 30-33 CD denotes βh1
T3387 28-29 , denotes ,
T3386 26-28 NN denotes ɛy
T3385 19-24 NNS denotes genes
T3384 10-18 NN denotes β-globin
T3383 4-9 NN denotes mouse
T3382 0-3 DT denotes The
T3598 1171-1172 . denotes .
T3597 1170-1171 NNP denotes ]
T3596 1165-1170 CD denotes 24,25
T3595 1164-1165 NNP denotes [
T3594 1160-1163 NNP denotes LCR
T3593 1156-1159 DT denotes the
T3592 1152-1155 IN denotes for
T3591 1140-1151 NN denotes competition
T3590 1131-1139 NN denotes promoter
T3589 1128-1130 IN denotes by
T3588 1117-1127 VBN denotes controlled
T3587 1114-1116 VBZ denotes is
T3586 1107-1113 NN denotes switch
T3585 1098-1106 NN denotes β-globin
T3584 1092-1097 NN denotes adult
T3583 1089-1091 TO denotes to
T3582 1080-1088 NN denotes γ-globin
T3581 1076-1079 DT denotes The
T3580 1074-1075 . denotes .
T3579 1073-1074 NNP denotes ]
T3578 1071-1073 CD denotes 26
T3577 1070-1071 NNP denotes [
T3576 1056-1069 RB denotes competitively
T3575 1046-1055 VBN denotes regulated
T3574 1043-1045 VB denotes be
T3573 1040-1042 TO denotes to
T3572 1032-1039 VBZ denotes appears
T3571 1027-1031 RB denotes also
T3570 1025-1026 NN denotes ɛ
T3569 1010-1024 NN denotes erythropoiesis
T3568 1000-1009 JJ denotes primitive
T3567 997-999 IN denotes in
T3566 988-996 IN denotes although
T3565 986-987 , denotes ,
T3564 985-986 NNP denotes ]
T3563 980-985 CD denotes 24,25
T3562 979-980 NNP denotes [
T3561 966-978 RB denotes autonomously
T3560 957-965 VBN denotes silenced
T3559 953-956 CC denotes and
T3558 943-952 VBN denotes activated
T3557 940-942 VBZ denotes is
T3556 938-939 NN denotes ɛ
T3555 936-937 , denotes ,
T3554 922-936 NNS denotes erythropoiesis
T3553 911-921 JJ denotes definitive
T3552 908-910 IN denotes In
T3551 906-907 . denotes .
T3550 895-906 RB denotes extensively
T3549 887-894 VBN denotes studied
T3548 882-886 VBN denotes been
T3547 878-881 VBZ denotes has
T3546 876-877 , denotes ,
T3545 870-876 NN denotes globin
T3544 868-869 NN denotes ɛ
T3543 866-867 , denotes ,
T3542 855-866 NN denotes counterpart
T3541 849-854 JJ denotes human
T3540 845-848 PRP$ denotes its
T3539 842-844 IN denotes of
T3538 832-841 VBG denotes silencing
T3537 829-831 IN denotes of
T3536 819-828 NN denotes mechanism
T3535 815-818 DT denotes The
T3534 813-814 . denotes .
T3533 808-813 NNS denotes cells
T3532 798-807 JJ denotes erythroid
T3531 787-797 JJ denotes definitive
T3530 784-786 IN denotes in
T3529 775-783 VBN denotes silenced
T3528 772-774 VBZ denotes is
T3527 767-771 NN denotes gene
T3526 764-766 JJ denotes ɛy
T3525 760-763 DT denotes The
T3524 758-759 . denotes .
T3523 757-758 NNP denotes ]
T3522 755-757 CD denotes 22
T3521 754-755 NNP denotes [
T3520 752-753 -RRB- denotes )
T3519 747-752 JJ denotes minor
T3518 743-746 CC denotes and
T3517 737-742 JJ denotes major
T3516 735-736 FW denotes β
T3515 734-735 -LRB- denotes (
T3514 726-733 NNS denotes globins
T3513 724-725 NN denotes β
T3512 718-723 NN denotes adult
T3511 710-717 VBP denotes express
T3510 704-709 NNS denotes cells
T3509 694-703 JJ denotes erythroid
T3508 683-693 JJ denotes definitive
T3507 677-682 WRB denotes where
T3506 671-676 NN denotes liver
T3505 665-670 JJ denotes fetal
T3504 661-664 DT denotes the
T3503 658-660 TO denotes to
T3502 651-657 NNS denotes shifts
T3501 636-650 VBZ denotes erythropoiesis
T3500 634-635 , denotes ,
R2324 T3411 T3401 cc and,are
R2326 T3412 T3401 conj function,are
R2327 T3413 T3415 nmod [,]
R2329 T3414 T3415 nummod 22,]
R2330 T3415 T3412 dobj ],function
R2331 T3416 T3401 punct .,are
R2333 T3417 T3418 amod High-level,expression
R2334 T3418 T3422 nsubj expression,requires
R2335 T3419 T3418 prep of,expression
R2337 T3420 T3421 det these,genes
R2338 T3421 T3419 pobj genes,of
R2339 T3422 T3422 ROOT requires,requires
R2341 T3423 T3425 det a,element
R2342 T3424 T3425 amod regulatory,element
R2344 T3425 T3422 dobj element,requires
R2345 T3426 T3425 punct ",",element
R2347 T3427 T3430 det the,region
R2348 T3428 T3429 compound locus,control
R2350 T3429 T3430 compound control,region
R2351 T3430 T3425 appos region,element
R2353 T3431 T3433 nsubjpass that,characterized
R2354 T3432 T3433 auxpass is,characterized
R2355 T3433 T3430 relcl characterized,region
R2358 T3434 T3433 agent by,characterized
R2360 T3435 T3436 det a,set
R2361 T3436 T3434 pobj set,by
R2363 T3437 T3436 prep of,set
R2364 T3438 T3440 amod nuclease,sites
R2365 T3439 T3440 amod hypersensitive,sites
R2366 T3440 T3437 pobj sites,of
R2367 T3441 T3436 acl spread,set
R2368 T3442 T3441 prep over,spread
R2370 T3443 T3444 nummod 25,kb
R2371 T3444 T3445 npadvmod kb,located
R2372 T3445 T3436 acl located,set
R2374 T3446 T3447 nummod 5,′
R2375 T3447 T3445 dobj ′,located
R2376 T3448 T3447 prep of,′
R2378 T3449 T3451 det the,gene
R2379 T3450 T3451 amod ɛy,gene
R2380 T3451 T3448 pobj gene,of
R2382 T3452 T3447 conj [,′
R2383 T3453 T3454 nummod 23,]
R2384 T3454 T3447 conj ],′
R2386 T3455 T3422 punct .,requires
R2387 T3456 T3458 det The,genes
R2388 T3457 T3458 amod β-globin,genes
R2390 T3458 T3460 nsubjpass genes,expressed
R2391 T3459 T3460 auxpass are,expressed
R2392 T3460 T3460 ROOT expressed,expressed
R2394 T3461 T3460 prep in,expressed
R2395 T3462 T3463 det a,tissue
R2396 T3463 T3461 pobj tissue,in
R2398 T3464 T3460 punct -,expressed
R2399 T3465 T3460 cc and,expressed
R2400 T3466 T3467 amod development-specific,fashion
R2402 T3467 T3460 conj fashion,expressed
R2403 T3468 T3460 punct .,expressed
R2404 T3469 T3473 prep In,originates
R2406 T3470 T3469 pobj mice,In
R2407 T3471 T3472 punct ",",erythropoiesis
R2408 T3472 T3473 nsubj erythropoiesis,originates
R2410 T3473 T3473 ROOT originates,originates
R2411 T3474 T3473 prep in,originates
R2413 T3475 T3478 det the,sac
R2414 T3476 T3477 amod embryonic,yolk
R2415 T3477 T3478 compound yolk,sac
R2416 T3478 T3474 pobj sac,in
R2417 T3479 T3483 advmod where,express
R2418 T3480 T3482 amod primitive,cells
R2420 T3481 T3482 amod erythroid,cells
R2421 T3482 T3483 nsubj cells,express
R2422 T3483 T3478 relcl express,sac
R2424 T3484 T3483 dobj ɛy,express
R2425 T3485 T3484 cc and,ɛy
R2426 T3486 T3487 amod βh-1,globins
R2427 T3487 T3484 conj globins,ɛy
R2429 T3488 T3490 nmod [,]
R2430 T3489 T3490 nummod 22,]
R2431 T3490 T3490 ROOT ],]
R2433 T3491 T3490 punct .,]
R2434 T3492 T3523 prep At,]
R2435 T3493 T3502 nummod 11.5,shifts
R2437 T3494 T3502 nmod d,shifts
R2438 T3495 T3496 compound post,coitus
R2440 T3496 T3502 dep coitus,shifts
R2441 T3497 T3498 punct (,dpc
R2442 T3498 T3496 parataxis dpc,coitus
R2444 T3499 T3498 punct ),dpc
R2445 T3500 T3501 punct ",",erythropoiesis
R2446 T3501 T3502 compound erythropoiesis,shifts
R2448 T3502 T3492 pobj shifts,At
R2449 T3503 T3502 prep to,shifts
R2451 T3504 T3506 det the,liver
R2452 T3505 T3506 amod fetal,liver
R2454 T3506 T3503 pobj liver,to
R2456 T3507 T3511 advmod where,express
R2459 T3508 T3510 amod definitive,cells
R2461 T3509 T3510 amod erythroid,cells
R2462 T3510 T3511 nsubj cells,express
R2464 T3511 T3506 relcl express,liver
R2465 T3512 T3514 compound adult,globins
R2466 T3513 T3514 compound β,globins
R2467 T3514 T3511 dobj globins,express
R2468 T3515 T3514 punct (,globins
R2470 T3516 T3517 advmod β,major
R2471 T3517 T3514 amod major,globins
R2472 T3518 T3517 cc and,major
R2474 T3519 T3517 conj minor,major
R2475 T3520 T3492 punct ),At
R2476 T3521 T3523 nmod [,]
R2478 T3522 T3523 nummod 22,]
R2479 T3523 T3523 ROOT ],]
R2481 T3524 T3523 punct .,]
R2482 T3525 T3527 det The,gene
R2483 T3526 T3527 amod ɛy,gene
R2485 T3527 T3529 nsubjpass gene,silenced
R2486 T3528 T3529 auxpass is,silenced
R2488 T3529 T3529 ROOT silenced,silenced
R2489 T3530 T3529 prep in,silenced
R2490 T3531 T3533 amod definitive,cells
R2492 T3532 T3533 amod erythroid,cells
R2493 T3533 T3530 pobj cells,in
R2495 T3534 T3529 punct .,silenced
R2496 T3535 T3536 det The,mechanism
R2497 T3536 T3549 nsubj mechanism,studied
R2499 T3537 T3536 prep of,mechanism
R2500 T3538 T3537 pcomp silencing,of
R2501 T3539 T3538 prep of,silencing
R2503 T3540 T3542 poss its,counterpart
R2504 T3541 T3542 amod human,counterpart
R2505 T3542 T3539 pobj counterpart,of
R2507 T3543 T3542 punct ",",counterpart
R2508 T3544 T3545 compound ɛ,globin
R2509 T3545 T3542 appos globin,counterpart
R2511 T3546 T3549 punct ",",studied
R2512 T3547 T3549 aux has,studied
R2514 T3548 T3549 auxpass been,studied
R2515 T3549 T3549 ROOT studied,studied
R2516 T3550 T3549 advmod extensively,studied
R2517 T3551 T3549 punct .,studied
R2518 T3552 T3558 prep In,activated
R2519 T3553 T3554 amod definitive,erythropoiesis
R2520 T3554 T3552 pobj erythropoiesis,In
R2522 T3555 T3558 punct ",",activated
R2523 T3556 T3558 nsubjpass ɛ,activated
R2525 T3557 T3558 auxpass is,activated
R2526 T3558 T3558 ROOT activated,activated
R2527 T3559 T3558 cc and,activated
R2529 T3560 T3558 conj silenced,activated
R2530 T3561 T3564 advmod autonomously,]
R2531 T3562 T3564 compound [,]
R2533 T3563 T3564 compound "24,25",]
R2534 T3564 T3560 dobj ],silenced
R2536 T3565 T3560 punct ",",silenced
R2537 T3566 T3572 mark although,appears
R2538 T3567 T3572 prep in,appears
R2540 T3568 T3570 amod primitive,ɛ
R2541 T3569 T3570 compound erythropoiesis,ɛ
R2542 T3570 T3567 pobj ɛ,in
R2544 T3571 T3572 advmod also,appears
R2545 T3572 T3558 conj appears,activated
R2547 T3573 T3575 aux to,regulated
R2548 T3574 T3575 auxpass be,regulated
R2549 T3575 T3572 xcomp regulated,appears
R2551 T3576 T3575 advmod competitively,regulated
R2552 T3577 T3579 nmod [,]
R2553 T3382 T3385 det The,genes
R2554 T3578 T3579 nummod 26,]
R2555 T3579 T3572 dep ],appears
R2556 T3580 T3572 punct .,appears
R2557 T3383 T3385 compound mouse,genes
R2558 T3581 T3582 det The,γ-globin
R2559 T3582 T3588 nsubjpass γ-globin,controlled
R2560 T3583 T3584 aux to,adult
R2561 T3384 T3385 compound β-globin,genes
R2562 T3385 T3395 nsubjpass genes,clustered
R2563 T3584 T3582 acl adult,γ-globin
R2564 T3585 T3586 compound β-globin,switch
R2565 T3386 T3385 appos ɛy,genes
R2566 T3586 T3588 nsubjpass switch,controlled
R2567 T3587 T3588 auxpass is,controlled
R2568 T3588 T3588 ROOT controlled,controlled
R2569 T3589 T3588 agent by,controlled
R2570 T3590 T3591 compound promoter,competition
R2571 T3591 T3589 pobj competition,by
R2572 T3387 T3386 punct ",",ɛy
R2573 T3592 T3591 prep for,competition
R2574 T3593 T3597 det the,]
R2575 T3388 T3386 appos βh1,ɛy
R2576 T3594 T3595 compound LCR,[
R2577 T3595 T3597 nmod [,]
R2578 T3389 T3386 punct ",",ɛy
R2579 T3596 T3597 nummod "24,25",]
R2580 T3597 T3592 pobj ],for
R2581 T3598 T3588 punct .,controlled
R2583 T3390 T3386 conj β-major,ɛy
R2586 T3391 T3390 punct ",",β-major
R2590 T3392 T3390 cc and,β-major
R2591 T3393 T3390 conj β-minor,β-major
R2592 T3394 T3395 auxpass are,clustered
R2595 T3395 T3395 ROOT clustered,clustered
R2598 T3396 T3395 prep on,clustered
R2602 T3397 T3396 pobj Chromosome,on
R2606 T3398 T3397 nummod 7,Chromosome
R2609 T3399 T3395 cc and,clustered
R2612 T3400 T3401 nsubj they,are
R2616 T3401 T3395 conj are,clustered
R2623 T3402 T3403 advmod highly,homologous
R2627 T3403 T3401 acomp homologous,are
R2631 T3404 T3403 prep to,homologous
R2634 T3405 T3407 poss their,counterparts
R2638 T3406 T3407 amod human,counterparts
R2642 T3407 T3404 pobj counterparts,to
R2645 T3408 T3407 prep in,counterparts
R2649 T3409 T3410 amod organizational,structure
R2653 T3410 T3408 pobj structure,in

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1554 1117-1127 Regulation denotes controlled
T1553 1117-1127 Regulation denotes controlled
T1552 1107-1113 Entity denotes switch
T1551 1092-1106 Protein denotes adult β-globin
T1550 1080-1088 Protein denotes γ-globin
T1549 832-841 Negative_regulation denotes silencing
T1548 868-876 Protein denotes ɛ globin
T1547 710-717 Gene_expression denotes express
T1546 718-733 Protein denotes adult β globins
T1545 522-540 Protein denotes embryonic yolk sac
T1544 423-432 Gene_expression denotes expressed
T1543 404-418 Protein denotes β-globin genes
T1542 4-18 Protein denotes mouse β-globin
R770 T1543 T1544 themeOf β-globin genes,expressed
R771 T1546 T1547 themeOf adult β globins,express
R772 T1548 T1549 themeOf ɛ globin,silencing
R773 T1550 T1553 themeOf γ-globin,controlled
R774 T1550 T1552 partOf γ-globin,switch
R775 T1551 T1554 themeOf adult β-globin,controlled
R776 T1551 T1552 partOf adult β-globin,switch
R777 T1552 T1553 Site switch,controlled
R778 T1552 T1554 Site switch,controlled

testone

Id Subject Object Predicate Lexical cue
T1047 1140-1151 Negative_regulation denotes competition
T1046 1131-1139 Entity denotes promoter
T1045 1117-1127 Regulation denotes controlled
T1044 1046-1055 Regulation denotes regulated
T1043 943-952 Positive_regulation denotes activated
T1042 832-841 Negative_regulation denotes silencing
T1041 710-717 Gene_expression denotes express
T1040 573-580 Gene_expression denotes express
T1039 423-432 Gene_expression denotes expressed
T1010 1098-1106 Protein denotes β-globin
T1009 1080-1088 Protein denotes γ-globin
T1008 1025-1026 Protein denotes ɛ
T1007 938-939 Protein denotes ɛ
T1006 868-876 Protein denotes ɛ globin
T1005 764-766 Protein denotes ɛy
T1004 747-752 Protein denotes minor
T1003 735-742 Protein denotes β major
T1002 588-600 Protein denotes βh-1 globins
T1001 581-583 Protein denotes ɛy
T1000 386-388 Protein denotes ɛy
T999 48-55 Protein denotes β-minor
T998 35-42 Protein denotes β-major
T997 30-33 Protein denotes βh1
T996 26-28 Protein denotes ɛy
R607 T1001 T1040 themeOf ɛy,express
R608 T1002 T1040 themeOf βh-1 globins,express
R609 T1003 T1041 themeOf β major,express
R610 T1006 T1042 themeOf ɛ globin,silencing
R611 T1007 T1044 themeOf ɛ,regulated
R612 T1007 T1043 themeOf ɛ,activated
R613 T1008 T1044 themeOf ɛ,regulated
R634 T1046 T1045 causeOf promoter,controlled

test3

Id Subject Object Predicate Lexical cue
T1165 1117-1127 Regulation denotes controlled
T1164 1098-1106 Protein denotes β-globin
T1163 1080-1088 Protein denotes γ-globin
T1162 1046-1055 Regulation denotes regulated
T1161 1025-1026 Protein denotes ɛ
T1160 943-952 Positive_regulation denotes activated
T1159 938-939 Protein denotes ɛ
T1158 868-876 Protein denotes ɛ globin
T1157 832-841 Negative_regulation denotes silencing
T1156 764-766 Protein denotes ɛy
T1155 747-752 Protein denotes minor
T1154 735-742 Protein denotes β major
T1153 710-717 Gene_expression denotes express
T1152 588-600 Protein denotes βh-1 globins
T1151 581-583 Protein denotes ɛy
T1150 573-580 Gene_expression denotes express
T1149 423-432 Gene_expression denotes expressed
T1148 386-388 Protein denotes ɛy
T1147 48-55 Protein denotes β-minor
T1146 35-42 Protein denotes β-major
T1145 30-33 Protein denotes βh1
T1144 26-28 Protein denotes ɛy
T1098 1098-1106 Protein denotes β-globin
T1097 1080-1088 Protein denotes γ-globin
T1096 1025-1026 Protein denotes ɛ
T1095 938-939 Protein denotes ɛ
T1094 868-876 Protein denotes ɛ globin
T1093 764-766 Protein denotes ɛy
T1092 747-752 Protein denotes minor
T1091 735-742 Protein denotes β major
T1090 588-600 Protein denotes βh-1 globins
T1089 581-583 Protein denotes ɛy
T1088 386-388 Protein denotes ɛy
T1087 48-55 Protein denotes β-minor
T1086 35-42 Protein denotes β-major
T1085 30-33 Protein denotes βh1
T1084 26-28 Protein denotes ɛy
R649 T1151 T1150 themeOf ɛy,express
R650 T1152 T1150 themeOf βh-1 globins,express
R651 T1153 T1155 themeOf express,minor
R652 T1154 T1155 themeOf β major,minor
R653 T1158 T1157 themeOf ɛ globin,silencing
R654 T1159 T1160 themeOf ɛ,activated
R655 T1160 T1162 themeOf activated,regulated