PMC:1359074 / 4628-4847 JSONTXT

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    2_test

    {"project":"2_test","denotations":[{"id":"16462943-10760285-85760966","span":{"begin":86,"end":88},"obj":"10760285"},{"id":"16462943-11310796-85760967","span":{"begin":144,"end":146},"obj":"11310796"},{"id":"T42","span":{"begin":86,"end":88},"obj":"10760285"},{"id":"T20259","span":{"begin":144,"end":146},"obj":"11310796"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T2052","span":{"begin":206,"end":216},"obj":"NN"},{"id":"T2051","span":{"begin":200,"end":205},"obj":"JJ"},{"id":"T2050","span":{"begin":196,"end":199},"obj":"DT"},{"id":"T2049","span":{"begin":193,"end":195},"obj":"IN"},{"id":"T2048","span":{"begin":182,"end":192},"obj":"VB"},{"id":"T2047","span":{"begin":179,"end":181},"obj":"VB"},{"id":"T2046","span":{"begin":172,"end":178},"obj":"NN"},{"id":"T2045","span":{"begin":158,"end":171},"obj":"NN"},{"id":"T2044","span":{"begin":153,"end":157},"obj":"NN"},{"id":"T2043","span":{"begin":149,"end":152},"obj":"DT"},{"id":"T2042","span":{"begin":147,"end":148},"obj":"-COMMA-"},{"id":"T2041","span":{"begin":146,"end":147},"obj":"-RRB-"},{"id":"T2040","span":{"begin":144,"end":146},"obj":"CD"},{"id":"T2039","span":{"begin":143,"end":144},"obj":"-LRB-"},{"id":"T2038","span":{"begin":130,"end":142},"obj":"NN"},{"id":"T2037","span":{"begin":127,"end":129},"obj":"IN"},{"id":"T2036","span":{"begin":120,"end":126},"obj":"RB"},{"id":"T2035","span":{"begin":110,"end":119},"obj":"VB"},{"id":"T2034","span":{"begin":105,"end":109},"obj":"NN"},{"id":"T2033","span":{"begin":103,"end":104},"obj":"NN"},{"id":"T2032","span":{"begin":99,"end":102},"obj":"DT"},{"id":"T2031","span":{"begin":91,"end":98},"obj":"IN"},{"id":"T2030","span":{"begin":88,"end":89},"obj":"-RRB-"},{"id":"T2029","span":{"begin":86,"end":88},"obj":"CD"},{"id":"T2028","span":{"begin":85,"end":86},"obj":"-LRB-"},{"id":"T2027","span":{"begin":83,"end":84},"obj":"-RRB-"},{"id":"T2026","span":{"begin":72,"end":83},"obj":"NN"},{"id":"T2025","span":{"begin":60,"end":71},"obj":"JJ"},{"id":"T2024","span":{"begin":56,"end":59},"obj":"DT"},{"id":"T2023","span":{"begin":53,"end":55},"obj":"IN"},{"id":"T2022","span":{"begin":41,"end":52},"obj":"NN"},{"id":"T2021","span":{"begin":34,"end":40},"obj":"CD"},{"id":"T2020","span":{"begin":27,"end":33},"obj":"IN"},{"id":"T2019","span":{"begin":22,"end":26},"obj":"NN"},{"id":"T2018","span":{"begin":16,"end":21},"obj":"JJ"},{"id":"T2017","span":{"begin":13,"end":15},"obj":"DT"},{"id":"T2016","span":{"begin":9,"end":12},"obj":"CC"},{"id":"T2015","span":{"begin":8,"end":9},"obj":"-LRB-"},{"id":"T2014","span":{"begin":3,"end":7},"obj":"NN"}],"relations":[{"id":"R1132","pred":"arg1Of","subj":"T2014","obj":"T2015"},{"id":"R1133","pred":"arg2Of","subj":"T2019","obj":"T2015"},{"id":"R1134","pred":"arg1Of","subj":"T2019","obj":"T2016"},{"id":"R1135","pred":"arg1Of","subj":"T2019","obj":"T2017"},{"id":"R1136","pred":"arg1Of","subj":"T2019","obj":"T2018"},{"id":"R1137","pred":"arg1Of","subj":"T2019","obj":"T2020"},{"id":"R1138","pred":"arg2Of","subj":"T2022","obj":"T2020"},{"id":"R1139","pred":"arg1Of","subj":"T2022","obj":"T2021"},{"id":"R1140","pred":"arg1Of","subj":"T2022","obj":"T2023"},{"id":"R1141","pred":"arg2Of","subj":"T2026","obj":"T2023"},{"id":"R1142","pred":"arg1Of","subj":"T2026","obj":"T2024"},{"id":"R1143","pred":"arg1Of","subj":"T2026","obj":"T2025"},{"id":"R1144","pred":"arg3Of","subj":"T2027","obj":"T2015"},{"id":"R1145","pred":"arg2Of","subj":"T2029","obj":"T2028"},{"id":"R1146","pred":"arg3Of","subj":"T2030","obj":"T2028"},{"id":"R1147","pred":"arg1Of","subj":"T2034","obj":"T2032"},{"id":"R1148","pred":"arg1Of","subj":"T2034","obj":"T2033"},{"id":"R1149","pred":"arg1Of","subj":"T2034","obj":"T2035"},{"id":"R1150","pred":"arg2Of","subj":"T2035","obj":"T2031"},{"id":"R1151","pred":"arg1Of","subj":"T2035","obj":"T2036"},{"id":"R1152","pred":"arg1Of","subj":"T2035","obj":"T2037"},{"id":"R1153","pred":"arg2Of","subj":"T2038","obj":"T2037"},{"id":"R1154","pred":"arg1Of","subj":"T2038","obj":"T2039"},{"id":"R1155","pred":"arg2Of","subj":"T2040","obj":"T2039"},{"id":"R1156","pred":"arg3Of","subj":"T2041","obj":"T2039"},{"id":"R1157","pred":"arg1Of","subj":"T2046","obj":"T2043"},{"id":"R1158","pred":"arg1Of","subj":"T2046","obj":"T2044"},{"id":"R1159","pred":"arg1Of","subj":"T2046","obj":"T2045"},{"id":"R1160","pred":"arg1Of","subj":"T2046","obj":"T2047"},{"id":"R1161","pred":"arg2Of","subj":"T2046","obj":"T2048"},{"id":"R1162","pred":"arg1Of","subj":"T2048","obj":"T2031"},{"id":"R1163","pred":"arg1Of","subj":"T2048","obj":"T2042"},{"id":"R1164","pred":"arg2Of","subj":"T2048","obj":"T2047"},{"id":"R1165","pred":"arg1Of","subj":"T2048","obj":"T2049"},{"id":"R1166","pred":"arg2Of","subj":"T2052","obj":"T2049"},{"id":"R1167","pred":"arg1Of","subj":"T2052","obj":"T2050"},{"id":"R1168","pred":"arg1Of","subj":"T2052","obj":"T2051"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T1429","span":{"begin":153,"end":157},"obj":"Protein"},{"id":"T1428","span":{"begin":103,"end":104},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T1263","span":{"begin":130,"end":142},"obj":"http://purl.obolibrary.org/obo/GO_0043473"},{"id":"T1239","span":{"begin":158,"end":171},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    sentences

    {"project":"sentences","denotations":[{"id":"T1210","span":{"begin":91,"end":217},"obj":"Sentence"},{"id":"T30","span":{"begin":91,"end":217},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    simple1

    {"project":"simple1","denotations":[{"id":"T1656","span":{"begin":153,"end":157},"obj":"Protein"},{"id":"T1655","span":{"begin":103,"end":104},"obj":"Protein"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T4234","span":{"begin":153,"end":157},"obj":"Protein"},{"id":"T4233","span":{"begin":103,"end":104},"obj":"Protein"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T2698","span":{"begin":153,"end":157},"obj":"Protein"},{"id":"T2697","span":{"begin":103,"end":104},"obj":"Protein"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T2820","span":{"begin":158,"end":171},"obj":"Transcription"},{"id":"T2776","span":{"begin":153,"end":157},"obj":"Protein"},{"id":"T2775","span":{"begin":103,"end":104},"obj":"Protein"}],"relations":[{"id":"R1856","pred":"themeOf","subj":"T2776","obj":"T2820"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T4100","span":{"begin":99,"end":109},"obj":"Protein"},{"id":"T4083","span":{"begin":103,"end":104},"obj":"Protein"},{"id":"T4043","span":{"begin":13,"end":83},"obj":"Protein"},{"id":"T4196","span":{"begin":149,"end":178},"obj":"Transcription"},{"id":"T4133","span":{"begin":153,"end":157},"obj":"Protein"},{"id":"T4168","span":{"begin":34,"end":83},"obj":"Entity"}],"relations":[{"id":"R3011","pred":"themeOf","subj":"T4133","obj":"T4196"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T3284","span":{"begin":216,"end":217},"obj":"."},{"id":"T3247","span":{"begin":13,"end":15},"obj":"DT"},{"id":"T3246","span":{"begin":9,"end":12},"obj":"CC"},{"id":"T3245","span":{"begin":8,"end":9},"obj":"-LRB-"},{"id":"T3244","span":{"begin":3,"end":7},"obj":"NN"},{"id":"T3283","span":{"begin":206,"end":216},"obj":"NNS"},{"id":"T3282","span":{"begin":200,"end":205},"obj":"JJ"},{"id":"T3281","span":{"begin":196,"end":199},"obj":"DT"},{"id":"T3280","span":{"begin":193,"end":195},"obj":"IN"},{"id":"T3279","span":{"begin":182,"end":192},"obj":"VBN"},{"id":"T3278","span":{"begin":179,"end":181},"obj":"VBZ"},{"id":"T3277","span":{"begin":172,"end":178},"obj":"NN"},{"id":"T3276","span":{"begin":158,"end":171},"obj":"NN"},{"id":"T3275","span":{"begin":153,"end":157},"obj":"NNP"},{"id":"T3274","span":{"begin":149,"end":152},"obj":"DT"},{"id":"T3273","span":{"begin":147,"end":148},"obj":","},{"id":"T3272","span":{"begin":146,"end":147},"obj":"NNP"},{"id":"T3271","span":{"begin":144,"end":146},"obj":"CD"},{"id":"T3270","span":{"begin":143,"end":144},"obj":"NNP"},{"id":"T3269","span":{"begin":130,"end":142},"obj":"NN"},{"id":"T3268","span":{"begin":127,"end":129},"obj":"IN"},{"id":"T3267","span":{"begin":120,"end":126},"obj":"RB"},{"id":"T3266","span":{"begin":110,"end":119},"obj":"NNS"},{"id":"T3265","span":{"begin":105,"end":109},"obj":"NN"},{"id":"T3264","span":{"begin":103,"end":104},"obj":"NN"},{"id":"T3263","span":{"begin":99,"end":102},"obj":"DT"},{"id":"T3262","span":{"begin":91,"end":98},"obj":"IN"},{"id":"T3261","span":{"begin":89,"end":90},"obj":"."},{"id":"T3260","span":{"begin":88,"end":89},"obj":"NNP"},{"id":"T3259","span":{"begin":86,"end":88},"obj":"CD"},{"id":"T3258","span":{"begin":85,"end":86},"obj":"NNP"},{"id":"T3257","span":{"begin":83,"end":84},"obj":"-RRB-"},{"id":"T3256","span":{"begin":72,"end":83},"obj":"NNS"},{"id":"T3255","span":{"begin":60,"end":71},"obj":"JJ"},{"id":"T3254","span":{"begin":56,"end":59},"obj":"DT"},{"id":"T3253","span":{"begin":53,"end":55},"obj":"IN"},{"id":"T3252","span":{"begin":41,"end":52},"obj":"NNS"},{"id":"T3251","span":{"begin":34,"end":40},"obj":"CD"},{"id":"T3250","span":{"begin":27,"end":33},"obj":"IN"},{"id":"T3249","span":{"begin":22,"end":26},"obj":"NN"},{"id":"T3248","span":{"begin":16,"end":21},"obj":"JJ"}],"relations":[{"id":"R2230","pred":"punct","subj":"T3245","obj":"T3244"},{"id":"R2231","pred":"cc","subj":"T3246","obj":"T3244"},{"id":"R2232","pred":"det","subj":"T3247","obj":"T3249"},{"id":"R2234","pred":"amod","subj":"T3248","obj":"T3249"},{"id":"R2235","pred":"conj","subj":"T3249","obj":"T3244"},{"id":"R2236","pred":"prep","subj":"T3250","obj":"T3249"},{"id":"R2238","pred":"nummod","subj":"T3251","obj":"T3252"},{"id":"R2239","pred":"pobj","subj":"T3252","obj":"T3250"},{"id":"R2241","pred":"prep","subj":"T3253","obj":"T3252"},{"id":"R2242","pred":"det","subj":"T3254","obj":"T3256"},{"id":"R2243","pred":"amod","subj":"T3255","obj":"T3256"},{"id":"R2245","pred":"pobj","subj":"T3256","obj":"T3253"},{"id":"R2248","pred":"nmod","subj":"T3258","obj":"T3260"},{"id":"R2249","pred":"nummod","subj":"T3259","obj":"T3260"},{"id":"R2250","pred":"ROOT","subj":"T3260","obj":"T3260"},{"id":"R2251","pred":"punct","subj":"T3261","obj":"T3260"},{"id":"R2253","pred":"mark","subj":"T3262","obj":"T3279"},{"id":"R2254","pred":"det","subj":"T3263","obj":"T3266"},{"id":"R2256","pred":"compound","subj":"T3264","obj":"T3265"},{"id":"R2257","pred":"compound","subj":"T3265","obj":"T3266"},{"id":"R2258","pred":"advcl","subj":"T3266","obj":"T3279"},{"id":"R2260","pred":"advmod","subj":"T3267","obj":"T3268"},{"id":"R2261","pred":"prep","subj":"T3268","obj":"T3266"},{"id":"R2263","pred":"pobj","subj":"T3269","obj":"T3268"},{"id":"R2265","pred":"nmod","subj":"T3270","obj":"T3272"},{"id":"R2266","pred":"nummod","subj":"T3271","obj":"T3272"},{"id":"R2267","pred":"appos","subj":"T3272","obj":"T3266"},{"id":"R2268","pred":"punct","subj":"T3273","obj":"T3279"},{"id":"R2269","pred":"det","subj":"T3274","obj":"T3277"},{"id":"R2271","pred":"compound","subj":"T3275","obj":"T3277"},{"id":"R2272","pred":"compound","subj":"T3276","obj":"T3277"},{"id":"R2274","pred":"nsubjpass","subj":"T3277","obj":"T3279"},{"id":"R2275","pred":"auxpass","subj":"T3278","obj":"T3279"},{"id":"R2276","pred":"ROOT","subj":"T3279","obj":"T3279"},{"id":"R2277","pred":"prep","subj":"T3280","obj":"T3279"},{"id":"R2279","pred":"det","subj":"T3281","obj":"T3283"},{"id":"R2280","pred":"amod","subj":"T3282","obj":"T3283"},{"id":"R2281","pred":"pobj","subj":"T3283","obj":"T3280"},{"id":"R2283","pred":"punct","subj":"T3284","obj":"T3279"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T1529","span":{"begin":153,"end":178},"obj":"Protein"},{"id":"T1528","span":{"begin":103,"end":109},"obj":"Protein"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    testone

    {"project":"testone","denotations":[{"id":"T992","span":{"begin":153,"end":157},"obj":"Protein"},{"id":"T991","span":{"begin":103,"end":104},"obj":"Protein"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}

    test3

    {"project":"test3","denotations":[{"id":"T1137","span":{"begin":153,"end":157},"obj":"Protein"},{"id":"T1136","span":{"begin":103,"end":104},"obj":"Protein"},{"id":"T1080","span":{"begin":153,"end":157},"obj":"Protein"},{"id":"T1079","span":{"begin":103,"end":104},"obj":"Protein"}],"text":"x6 gene (and no other gene within 50,000 nucleotides of the chromosomal breakpoints) [14]. Because the p gene functions solely in pigmentation [16], the Sox6 transcription factor is implicated in all other phenotypes.\nA"}