PMC:1359074 / 41224-42635
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19941 | 1283-1323 | NN | denotes | 5′AATGCAGAACAAAGGGTCAGAtgagTGTCTGCGAAG3′ |
T19957 | 1409-1410 | -RRB- | denotes | ) |
T19956 | 1402-1409 | NN | denotes | MHB1650 |
T19955 | 1401-1402 | -LRB- | denotes | ( |
T19954 | 1360-1400 | NN | denotes | 5′AATGCAGtgccAAGGGTCAGAACATTGTCTGCGAAG3′ |
T19953 | 1358-1359 | -COLON- | denotes | : |
T19952 | 1357-1358 | -RRB- | denotes | ) |
T19951 | 1355-1357 | NN | denotes | M3 |
T19950 | 1354-1355 | -LRB- | denotes | ( |
T19949 | 1352-1353 | CD | denotes | 3 |
T19948 | 1346-1351 | NN | denotes | probe |
T19947 | 1339-1345 | JJ | denotes | mutant |
T19946 | 1335-1338 | IN | denotes | for |
T19945 | 1333-1334 | -COLON- | denotes | ; |
T19944 | 1332-1333 | -RRB- | denotes | ) |
T19943 | 1325-1332 | NN | denotes | MHB1648 |
T19942 | 1324-1325 | -LRB- | denotes | ( |
T19940 | 1281-1282 | -COLON- | denotes | : |
T19939 | 1280-1281 | -RRB- | denotes | ) |
T19938 | 1278-1280 | NN | denotes | M2 |
T19937 | 1277-1278 | -LRB- | denotes | ( |
T19936 | 1275-1276 | CD | denotes | 2 |
T19935 | 1269-1274 | NN | denotes | probe |
T19934 | 1262-1268 | JJ | denotes | mutant |
T19933 | 1258-1261 | IN | denotes | for |
T19932 | 1256-1257 | -COLON- | denotes | ; |
T19931 | 1255-1256 | -RRB- | denotes | ) |
T19930 | 1248-1255 | NN | denotes | MHB1644 |
T19929 | 1247-1248 | -LRB- | denotes | ( |
T19928 | 1213-1246 | NN | denotes | 5′AACAAAGGGTCAGAACATTGTCTGCGAAG3′ |
T19927 | 1211-1212 | -COLON- | denotes | : |
T19926 | 1210-1211 | -RRB- | denotes | ) |
T19925 | 1208-1210 | NN | denotes | M1 |
T19924 | 1207-1208 | -LRB- | denotes | ( |
T19923 | 1205-1206 | CD | denotes | 1 |
T19922 | 1199-1204 | NN | denotes | probe |
T19921 | 1192-1198 | JJ | denotes | mutant |
T19920 | 1188-1191 | IN | denotes | for |
T19919 | 1186-1187 | -COLON- | denotes | ; |
T19918 | 1185-1186 | -RRB- | denotes | ) |
T19917 | 1178-1185 | NN | denotes | MHB1556 |
T19916 | 1177-1178 | -LRB- | denotes | ( |
T19915 | 1136-1176 | NN | denotes | 5′AATGCAGAACAAAGGGTCAGAACATTGTCTGCGAAG3′ |
T19914 | 1134-1135 | -COLON- | denotes | : |
T19913 | 1129-1134 | NN | denotes | probe |
T19912 | 1126-1128 | NN | denotes | WT |
T19911 | 1120-1125 | JJ | denotes | 36-bp |
T19910 | 1116-1119 | DT | denotes | the |
T19909 | 1112-1115 | IN | denotes | For |
T19908 | 1110-1111 | -COLON- | denotes | : |
T19907 | 1109-1110 | -RRB- | denotes | ) |
T19906 | 1103-1109 | VB | denotes | listed |
T19905 | 1099-1102 | VB | denotes | are |
T19904 | 1092-1098 | NN | denotes | oligos |
T19903 | 1084-1091 | JJ | denotes | forward |
T19902 | 1079-1083 | RB | denotes | only |
T19901 | 1078-1079 | -LRB- | denotes | ( |
T19900 | 1070-1077 | NN | denotes | follows |
T19899 | 1067-1069 | IN | denotes | as |
T19898 | 1063-1066 | VB | denotes | are |
T19897 | 1046-1062 | NN | denotes | oligonucleotides |
T19896 | 1042-1045 | DT | denotes | the |
T19895 | 1039-1041 | IN | denotes | of |
T19894 | 1029-1038 | NN | denotes | sequences |
T19893 | 1025-1028 | NN | denotes | DNA |
T19892 | 1021-1024 | DT | denotes | The |
T19891 | 1018-1019 | -RRB- | denotes | ) |
T19890 | 1013-1018 | JJ | denotes | above |
T19889 | 1010-1012 | IN | denotes | as |
T19888 | 1000-1009 | VB | denotes | described |
T19887 | 999-1000 | -LRB- | denotes | ( |
T19886 | 988-998 | NN | denotes | antibodies |
T19885 | 983-987 | NN | denotes | Sox6 |
T19884 | 979-982 | CC | denotes | and |
T19883 | 977-978 | -COMMA- | denotes | , |
T19882 | 975-977 | NN | denotes | HA |
T19881 | 973-974 | -COMMA- | denotes | , |
T19880 | 968-973 | NN | denotes | c-Myc |
T19879 | 959-967 | VB | denotes | included |
T19878 | 950-958 | NN | denotes | analyses |
T19877 | 939-949 | NN | denotes | supershift |
T19876 | 935-938 | IN | denotes | for |
T19874 | 919-929 | NN | denotes | Antibodies |
T19873 | 902-917 | NN | denotes | autoradiography |
T19872 | 899-901 | TO | denotes | to |
T19871 | 893-898 | RB | denotes | prior |
T19870 | 887-892 | VB | denotes | dried |
T19869 | 882-886 | VB | denotes | were |
T19868 | 877-881 | NN | denotes | gels |
T19867 | 873-876 | DT | denotes | the |
T19866 | 869-872 | CC | denotes | and |
T19865 | 867-868 | -COMMA- | denotes | , |
T19864 | 856-867 | NN | denotes | temperature |
T19863 | 851-855 | NN | denotes | room |
T19862 | 848-850 | IN | denotes | at |
T19861 | 846-847 | NN | denotes | h |
T19860 | 842-845 | CD | denotes | 4–8 |
T19859 | 838-841 | IN | denotes | for |
T19858 | 833-837 | NN | denotes | mAmp |
T19857 | 830-832 | CD | denotes | 19 |
T19856 | 821-829 | JJ | denotes | constant |
T19855 | 819-820 | DT | denotes | a |
T19854 | 816-818 | IN | denotes | at |
T19853 | 806-815 | VB | denotes | performed |
T19852 | 802-805 | VB | denotes | was |
T19851 | 786-801 | NN | denotes | Electrophoresis |
T19850 | 781-784 | NN | denotes | gel |
T19849 | 766-780 | NN | denotes | polyacrylamide |
T19848 | 764-765 | -RRB- | denotes | ) |
T19847 | 761-764 | NN | denotes | w/v |
T19846 | 760-761 | -LRB- | denotes | ( |
T19845 | 758-759 | NN | denotes | % |
T19844 | 757-758 | CD | denotes | 6 |
T19843 | 754-756 | CC | denotes | or |
T19842 | 752-753 | NN | denotes | % |
T19841 | 751-752 | CD | denotes | 4 |
T19840 | 749-750 | DT | denotes | a |
T19839 | 746-748 | IN | denotes | on |
T19838 | 739-745 | VB | denotes | loaded |
T19837 | 735-738 | CC | denotes | and |
T19836 | 723-734 | NN | denotes | temperature |
T19835 | 718-722 | NN | denotes | room |
T19834 | 715-717 | IN | denotes | at |
T19833 | 711-714 | NN | denotes | min |
T19832 | 708-710 | CD | denotes | 60 |
T19831 | 705-707 | CC | denotes | or |
T19830 | 701-704 | NN | denotes | min |
T19829 | 698-700 | CD | denotes | 30 |
T19828 | 694-697 | IN | denotes | for |
T19827 | 684-693 | VB | denotes | incubated |
T19826 | 679-683 | VB | denotes | were |
T19825 | 671-678 | NN | denotes | samples |
T19824 | 667-670 | DT | denotes | the |
T19823 | 665-666 | -COMMA- | denotes | , |
T19822 | 660-665 | NN | denotes | probe |
T19821 | 647-659 | VB | denotes | radiolabeled |
T19820 | 643-646 | DT | denotes | the |
T19819 | 640-642 | IN | denotes | of |
T19818 | 631-639 | NN | denotes | addition |
T19817 | 621-630 | VB | denotes | Following |
T19816 | 614-619 | NN | denotes | probe |
T19815 | 601-613 | VB | denotes | radiolabeled |
T19814 | 598-600 | IN | denotes | of |
T19813 | 589-597 | NN | denotes | addition |
T19812 | 586-588 | TO | denotes | to |
T19811 | 580-585 | JJ | denotes | prior |
T19810 | 576-579 | NN | denotes | min |
T19809 | 573-575 | CD | denotes | 60 |
T19808 | 570-572 | TO | denotes | to |
T19807 | 566-569 | NN | denotes | min |
T19806 | 563-565 | CD | denotes | 30 |
T19805 | 557-562 | VB | denotes | added |
T19804 | 553-556 | VB | denotes | was |
T19803 | 551-552 | -RRB- | denotes | ) |
T19802 | 549-551 | NN | denotes | μl |
T19801 | 547-548 | CD | denotes | 3 |
T19800 | 546-547 | -LRB- | denotes | ( |
T19799 | 537-545 | NN | denotes | antibody |
T19798 | 534-536 | CC | denotes | or |
T19797 | 532-533 | -RRB- | denotes | ) |
T19796 | 526-532 | NN | denotes | excess |
T19795 | 520-525 | JJ | denotes | molar |
T19794 | 511-519 | JJ | denotes | 200-fold |
T19793 | 510-511 | -LRB- | denotes | ( |
T19792 | 499-509 | NN | denotes | competitor |
T19791 | 483-498 | NN | denotes | oligonucleotide |
T19790 | 472-482 | JJ | denotes | unlabelled |
T19789 | 462-471 | VB | denotes | indicated |
T19788 | 458-461 | DT | denotes | the |
T19787 | 456-457 | -COMMA- | denotes | , |
T19786 | 450-456 | NN | denotes | assays |
T19785 | 439-449 | NN | denotes | supershift |
T19784 | 436-438 | CC | denotes | or |
T19783 | 424-435 | NN | denotes | competition |
T19782 | 420-423 | IN | denotes | For |
T19781 | 413-418 | NN | denotes | MgCl2 |
T19780 | 410-412 | NN | denotes | mM |
T19779 | 406-409 | CD | denotes | 0.6 |
T19778 | 404-405 | -COMMA- | denotes | , |
T19777 | 401-404 | NN | denotes | DTT |
T19776 | 398-400 | NN | denotes | mM |
T19775 | 393-397 | CD | denotes | 0.25 |
T19705 | 88-89 | -RRB- | denotes | ] |
T19704 | 83-88 | NN | denotes | γ-32P |
T19703 | 82-83 | -LRB- | denotes | [ |
T19702 | 77-81 | IN | denotes | with |
T19701 | 65-76 | VB | denotes | end-labeled |
T19700 | 61-64 | CC | denotes | and |
T19699 | 52-60 | VB | denotes | annealed |
T19698 | 47-51 | VB | denotes | were |
T19697 | 30-46 | NN | denotes | oligonucleotides |
T19696 | 16-29 | JJ | denotes | complementary |
T19695 | 0-15 | JJ | denotes | Single-stranded |
T19774 | 391-392 | -COMMA- | denotes | , |
T19773 | 387-391 | NN | denotes | EDTA |
T19772 | 384-386 | NN | denotes | mM |
T19771 | 380-383 | CD | denotes | 0.1 |
T19770 | 378-379 | -COMMA- | denotes | , |
T19769 | 377-378 | -RRB- | denotes | ) |
T19768 | 376-377 | CD | denotes | 7 |
T19767 | 373-375 | NN | denotes | pH |
T19766 | 372-373 | -LRB- | denotes | ( |
T19765 | 366-371 | NN | denotes | HEPES |
T19764 | 363-365 | NN | denotes | mM |
T19763 | 360-362 | CD | denotes | 10 |
T19762 | 358-359 | -COMMA- | denotes | , |
T19761 | 357-358 | -RRB- | denotes | ) |
T19760 | 352-357 | NN | denotes | dG-dC |
T19759 | 351-352 | -LRB- | denotes | ( |
T19758 | 346-350 | NN | denotes | poly |
T19757 | 343-345 | CC | denotes | or |
T19756 | 341-342 | -RRB- | denotes | ) |
T19755 | 336-341 | NN | denotes | dI-dC |
T19754 | 335-336 | -LRB- | denotes | ( |
T19753 | 330-334 | NN | denotes | poly |
T19752 | 324-329 | NN | denotes | ng/μl |
T19751 | 321-323 | CD | denotes | 50 |
T19750 | 319-320 | -COMMA- | denotes | , |
T19749 | 316-319 | NN | denotes | BSA |
T19748 | 310-315 | NN | denotes | ng/μl |
T19747 | 306-309 | CD | denotes | 200 |
T19746 | 304-305 | -COMMA- | denotes | , |
T19745 | 296-304 | NN | denotes | glycerol |
T19744 | 294-295 | NN | denotes | % |
T19743 | 292-294 | CD | denotes | 10 |
T19742 | 290-291 | -COMMA- | denotes | , |
T19741 | 286-290 | NN | denotes | NaCl |
T19740 | 283-285 | NN | denotes | mM |
T19739 | 279-282 | CD | denotes | 100 |
T19738 | 277-278 | -COLON- | denotes | : |
T19737 | 271-277 | NN | denotes | buffer |
T19736 | 263-270 | NN | denotes | binding |
T19735 | 260-262 | IN | denotes | in |
T19734 | 253-259 | NN | denotes | lysate |
T19733 | 240-252 | NN | denotes | reticulocyte |
T19732 | 236-239 | DT | denotes | the |
T19731 | 231-235 | IN | denotes | with |
T19730 | 225-230 | IN | denotes | along |
T19729 | 220-224 | NN | denotes | Sox6 |
T19728 | 203-219 | JJ | denotes | vitro-translated |
T19727 | 200-202 | FW | denotes | in |
T19726 | 197-199 | IN | denotes | of |
T19725 | 194-196 | NN | denotes | μl |
T19724 | 192-193 | CD | denotes | 3 |
T19723 | 189-191 | CC | denotes | or |
T19722 | 183-188 | NN | denotes | cells |
T19721 | 179-182 | NN | denotes | MEL |
T19720 | 174-178 | IN | denotes | from |
T19719 | 165-173 | NN | denotes | proteins |
T19718 | 157-164 | JJ | denotes | nuclear |
T19717 | 154-156 | IN | denotes | of |
T19716 | 151-153 | NN | denotes | μg |
T19715 | 149-150 | CD | denotes | 5 |
T19714 | 144-148 | IN | denotes | with |
T19713 | 134-143 | VB | denotes | performed |
T19712 | 130-133 | VB | denotes | was |
T19711 | 125-129 | NN | denotes | EMSA |
T19710 | 117-123 | NN | denotes | kinase |
T19709 | 102-116 | NN | denotes | polynucleotide |
T19708 | 99-101 | NN | denotes | T4 |
T19707 | 94-98 | IN | denotes | with |
T19706 | 90-93 | NN | denotes | ATP |
T19875 | 930-934 | VB | denotes | used |
R13935 | T19697 | T19695 | arg1Of | oligonucleotides,Single-stranded |
R13936 | T19697 | T19696 | arg1Of | oligonucleotides,complementary |
R13937 | T19697 | T19698 | arg1Of | oligonucleotides,were |
R13938 | T19697 | T19699 | arg2Of | oligonucleotides,annealed |
R13939 | T19697 | T19701 | arg2Of | oligonucleotides,end-labeled |
R13940 | T19699 | T19700 | arg1Of | annealed,and |
R13941 | T19700 | T19698 | arg2Of | and,were |
R13942 | T19701 | T19700 | arg2Of | end-labeled,and |
R13943 | T19701 | T19702 | arg1Of | end-labeled,with |
R13944 | T19704 | T19703 | arg2Of | γ-32P,[ |
R13945 | T19705 | T19703 | arg3Of | ],[ |
R13946 | T19706 | T19702 | arg2Of | ATP,with |
R13947 | T19706 | T19703 | arg1Of | ATP,[ |
R13948 | T19706 | T19707 | arg1Of | ATP,with |
R13949 | T19710 | T19707 | arg2Of | kinase,with |
R13950 | T19710 | T19708 | arg1Of | kinase,T4 |
R13951 | T19710 | T19709 | arg1Of | kinase,polynucleotide |
R13952 | T19711 | T19712 | arg1Of | EMSA,was |
R13953 | T19711 | T19713 | arg2Of | EMSA,performed |
R13954 | T19713 | T19712 | arg2Of | performed,was |
R13955 | T19713 | T19714 | arg1Of | performed,with |
R13956 | T19713 | T19738 | arg1Of | performed,: |
R13957 | T19716 | T19715 | arg1Of | μg,5 |
R13958 | T19716 | T19717 | arg1Of | μg,of |
R13959 | T19716 | T19723 | arg1Of | μg,or |
R13960 | T19719 | T19717 | arg2Of | proteins,of |
R13961 | T19719 | T19718 | arg1Of | proteins,nuclear |
R13962 | T19719 | T19720 | arg1Of | proteins,from |
R13963 | T19722 | T19720 | arg2Of | cells,from |
R13964 | T19722 | T19721 | arg1Of | cells,MEL |
R13965 | T19723 | T19714 | arg2Of | or,with |
R13966 | T19723 | T19731 | arg1Of | or,with |
R13967 | T19725 | T19723 | arg2Of | μl,or |
R13968 | T19725 | T19724 | arg1Of | μl,3 |
R13969 | T19725 | T19726 | arg1Of | μl,of |
R13970 | T19728 | T19727 | arg1Of | vitro-translated,in |
R13971 | T19729 | T19726 | arg2Of | Sox6,of |
R13972 | T19729 | T19728 | arg1Of | Sox6,vitro-translated |
R13973 | T19731 | T19730 | arg1Of | with,along |
R13974 | T19734 | T19731 | arg2Of | lysate,with |
R13975 | T19734 | T19732 | arg1Of | lysate,the |
R13976 | T19734 | T19733 | arg1Of | lysate,reticulocyte |
R13977 | T19734 | T19735 | arg1Of | lysate,in |
R13978 | T19737 | T19735 | arg2Of | buffer,in |
R13979 | T19737 | T19736 | arg1Of | buffer,binding |
R13980 | T19739 | T19740 | arg1Of | 100,mM |
R13981 | T19741 | T19739 | arg1Of | NaCl,100 |
R13982 | T19741 | T19742 | arg1Of | NaCl,"," |
R13983 | T19742 | T19746 | arg1Of | ",","," |
R13984 | T19743 | T19744 | arg1Of | 10,% |
R13985 | T19745 | T19742 | arg2Of | glycerol,"," |
R13986 | T19745 | T19743 | arg1Of | glycerol,10 |
R13987 | T19746 | T19750 | arg1Of | ",","," |
R13988 | T19749 | T19746 | arg2Of | BSA,"," |
R13989 | T19749 | T19747 | arg1Of | BSA,200 |
R13990 | T19749 | T19748 | arg1Of | BSA,ng/μl |
R13991 | T19750 | T19757 | arg1Of | ",",or |
R13992 | T19753 | T19750 | arg2Of | poly,"," |
R13993 | T19753 | T19751 | arg1Of | poly,50 |
R13994 | T19753 | T19752 | arg1Of | poly,ng/μl |
R13995 | T19753 | T19754 | arg1Of | poly,( |
R13996 | T19755 | T19754 | arg2Of | dI-dC,( |
R13997 | T19756 | T19754 | arg3Of | ),( |
R13998 | T19757 | T19770 | arg1Of | or,"," |
R13999 | T19758 | T19759 | arg1Of | poly,( |
R14000 | T19758 | T19762 | arg1Of | poly,"," |
R14001 | T19760 | T19759 | arg2Of | dG-dC,( |
R14002 | T19761 | T19759 | arg3Of | ),( |
R14003 | T19762 | T19757 | arg2Of | ",",or |
R14004 | T19763 | T19764 | arg1Of | 10,mM |
R14005 | T19765 | T19762 | arg2Of | HEPES,"," |
R14006 | T19765 | T19763 | arg1Of | HEPES,10 |
R14007 | T19765 | T19766 | arg1Of | HEPES,( |
R14008 | T19767 | T19766 | arg2Of | pH,( |
R14009 | T19767 | T19768 | arg1Of | pH,7 |
R14010 | T19769 | T19766 | arg3Of | ),( |
R14011 | T19771 | T19772 | arg1Of | 0.1,mM |
R14012 | T19773 | T19770 | arg2Of | EDTA,"," |
R14013 | T19773 | T19771 | arg1Of | EDTA,0.1 |
R14014 | T19773 | T19774 | arg1Of | EDTA,"," |
R14015 | T19773 | T19778 | arg1Of | EDTA,"," |
R14016 | T19775 | T19776 | arg1Of | 0.25,mM |
R14017 | T19777 | T19774 | arg2Of | DTT,"," |
R14018 | T19777 | T19775 | arg1Of | DTT,0.25 |
R14019 | T19779 | T19780 | arg1Of | 0.6,mM |
R14020 | T19781 | T19778 | arg2Of | MgCl2,"," |
R14021 | T19781 | T19779 | arg1Of | MgCl2,0.6 |
R14022 | T19783 | T19784 | arg1Of | competition,or |
R14023 | T19784 | T19782 | arg2Of | or,For |
R14024 | T19786 | T19784 | arg2Of | assays,or |
R14025 | T19786 | T19785 | arg1Of | assays,supershift |
R14026 | T19792 | T19789 | arg2Of | competitor,indicated |
R14027 | T19792 | T19790 | arg1Of | competitor,unlabelled |
R14028 | T19792 | T19791 | arg1Of | competitor,oligonucleotide |
R14029 | T19792 | T19793 | arg1Of | competitor,( |
R14030 | T19792 | T19798 | arg1Of | competitor,or |
R14031 | T19796 | T19793 | arg2Of | excess,( |
R14032 | T19796 | T19794 | arg1Of | excess,200-fold |
R14033 | T19796 | T19795 | arg1Of | excess,molar |
R14034 | T19797 | T19793 | arg3Of | ),( |
R14035 | T19798 | T19788 | arg1Of | or,the |
R14036 | T19798 | T19804 | arg1Of | or,was |
R14037 | T19798 | T19805 | arg2Of | or,added |
R14038 | T19799 | T19798 | arg2Of | antibody,or |
R14039 | T19799 | T19800 | arg1Of | antibody,( |
R14040 | T19802 | T19800 | arg2Of | μl,( |
R14041 | T19802 | T19801 | arg1Of | μl,3 |
R14042 | T19803 | T19800 | arg3Of | ),( |
R14043 | T19805 | T19782 | arg1Of | added,For |
R14044 | T19805 | T19787 | arg1Of | added,"," |
R14045 | T19805 | T19804 | arg2Of | added,was |
R14046 | T19806 | T19808 | arg1Of | 30,to |
R14047 | T19808 | T19807 | arg1Of | to,min |
R14048 | T19809 | T19808 | arg2Of | 60,to |
R14049 | T19810 | T19805 | arg3Of | min,added |
R14050 | T19810 | T19806 | arg1Of | min,30 |
R14051 | T19810 | T19811 | arg1Of | min,prior |
R14052 | T19811 | T19812 | arg1Of | prior,to |
R14053 | T19813 | T19812 | arg2Of | addition,to |
R14054 | T19813 | T19814 | arg1Of | addition,of |
R14055 | T19816 | T19814 | arg2Of | probe,of |
R14056 | T19816 | T19815 | arg2Of | probe,radiolabeled |
R14057 | T19818 | T19817 | arg2Of | addition,Following |
R14058 | T19818 | T19819 | arg1Of | addition,of |
R14059 | T19822 | T19819 | arg2Of | probe,of |
R14060 | T19822 | T19820 | arg1Of | probe,the |
R14061 | T19822 | T19821 | arg2Of | probe,radiolabeled |
R14062 | T19825 | T19824 | arg1Of | samples,the |
R14063 | T19825 | T19826 | arg1Of | samples,were |
R14064 | T19825 | T19827 | arg2Of | samples,incubated |
R14065 | T19825 | T19838 | arg2Of | samples,loaded |
R14066 | T19827 | T19828 | arg1Of | incubated,for |
R14067 | T19827 | T19837 | arg1Of | incubated,and |
R14068 | T19830 | T19829 | arg1Of | min,30 |
R14069 | T19830 | T19831 | arg1Of | min,or |
R14070 | T19831 | T19828 | arg2Of | or,for |
R14071 | T19831 | T19834 | arg1Of | or,at |
R14072 | T19833 | T19831 | arg2Of | min,or |
R14073 | T19833 | T19832 | arg1Of | min,60 |
R14074 | T19836 | T19834 | arg2Of | temperature,at |
R14075 | T19836 | T19835 | arg1Of | temperature,room |
R14076 | T19837 | T19817 | arg1Of | and,Following |
R14077 | T19837 | T19823 | arg1Of | and,"," |
R14078 | T19837 | T19826 | arg2Of | and,were |
R14079 | T19838 | T19837 | arg2Of | loaded,and |
R14080 | T19838 | T19839 | arg1Of | loaded,on |
R14081 | T19842 | T19843 | arg1Of | %,or |
R14082 | T19843 | T19841 | arg1Of | or,4 |
R14083 | T19844 | T19843 | arg2Of | 6,or |
R14084 | T19845 | T19839 | arg2Of | %,on |
R14085 | T19845 | T19840 | arg1Of | %,a |
R14086 | T19845 | T19842 | arg1Of | %,% |
R14087 | T19845 | T19844 | arg1Of | %,6 |
R14088 | T19847 | T19846 | arg2Of | w/v,( |
R14089 | T19848 | T19846 | arg3Of | ),( |
R14090 | T19850 | T19838 | arg3Of | gel,loaded |
R14091 | T19850 | T19846 | arg1Of | gel,( |
R14092 | T19850 | T19849 | arg1Of | gel,polyacrylamide |
R14093 | T19851 | T19852 | arg1Of | Electrophoresis,was |
R14094 | T19851 | T19853 | arg2Of | Electrophoresis,performed |
R14095 | T19853 | T19852 | arg2Of | performed,was |
R14096 | T19853 | T19854 | arg1Of | performed,at |
R14097 | T19853 | T19859 | arg1Of | performed,for |
R14098 | T19853 | T19862 | arg1Of | performed,at |
R14099 | T19853 | T19866 | arg1Of | performed,and |
R14100 | T19858 | T19854 | arg2Of | mAmp,at |
R14101 | T19858 | T19855 | arg1Of | mAmp,a |
R14102 | T19858 | T19856 | arg1Of | mAmp,constant |
R14103 | T19858 | T19857 | arg1Of | mAmp,19 |
R14104 | T19861 | T19859 | arg2Of | h,for |
R14105 | T19861 | T19860 | arg1Of | h,4–8 |
R14106 | T19864 | T19862 | arg2Of | temperature,at |
R14107 | T19864 | T19863 | arg1Of | temperature,room |
R14108 | T19866 | T19865 | arg1Of | and,"," |
R14109 | T19868 | T19867 | arg1Of | gels,the |
R14110 | T19868 | T19869 | arg1Of | gels,were |
R14111 | T19868 | T19870 | arg2Of | gels,dried |
R14112 | T19870 | T19866 | arg2Of | dried,and |
R14113 | T19870 | T19869 | arg2Of | dried,were |
R14114 | T19870 | T19871 | arg1Of | dried,prior |
R14115 | T19871 | T19872 | arg1Of | prior,to |
R14116 | T19873 | T19872 | arg2Of | autoradiography,to |
R14117 | T19874 | T19875 | arg2Of | Antibodies,used |
R14118 | T19874 | T19879 | arg1Of | Antibodies,included |
R14119 | T19875 | T19876 | arg1Of | used,for |
R14120 | T19878 | T19876 | arg2Of | analyses,for |
R14121 | T19878 | T19877 | arg1Of | analyses,supershift |
R14122 | T19880 | T19881 | arg1Of | c-Myc,"," |
R14123 | T19881 | T19884 | arg1Of | ",",and |
R14124 | T19882 | T19881 | arg2Of | HA,"," |
R14125 | T19884 | T19883 | arg1Of | and,"," |
R14126 | T19885 | T19884 | arg2Of | Sox6,and |
R14127 | T19886 | T19879 | arg2Of | antibodies,included |
R14128 | T19886 | T19880 | arg1Of | antibodies,c-Myc |
R14129 | T19886 | T19882 | arg1Of | antibodies,HA |
R14130 | T19886 | T19885 | arg1Of | antibodies,Sox6 |
R14131 | T19886 | T19887 | arg1Of | antibodies,( |
R14132 | T19888 | T19887 | arg2Of | described,( |
R14133 | T19888 | T19889 | arg1Of | described,as |
R14134 | T19890 | T19889 | arg2Of | above,as |
R14135 | T19891 | T19887 | arg3Of | ),( |
R14136 | T19894 | T19892 | arg1Of | sequences,The |
R14137 | T19894 | T19893 | arg1Of | sequences,DNA |
R14138 | T19894 | T19895 | arg1Of | sequences,of |
R14139 | T19894 | T19898 | arg1Of | sequences,are |
R14140 | T19894 | T19899 | arg1Of | sequences,as |
R14141 | T19897 | T19895 | arg2Of | oligonucleotides,of |
R14142 | T19897 | T19896 | arg1Of | oligonucleotides,the |
R14143 | T19898 | T19901 | arg1Of | are,( |
R14144 | T19898 | T19908 | arg1Of | are,: |
R14145 | T19899 | T19898 | arg2Of | as,are |
R14146 | T19900 | T19899 | arg2Of | follows,as |
R14147 | T19904 | T19902 | arg1Of | oligos,only |
R14148 | T19904 | T19903 | arg1Of | oligos,forward |
R14149 | T19904 | T19905 | arg1Of | oligos,are |
R14150 | T19904 | T19906 | arg2Of | oligos,listed |
R14151 | T19906 | T19901 | arg2Of | listed,( |
R14152 | T19906 | T19905 | arg2Of | listed,are |
R14153 | T19907 | T19901 | arg3Of | ),( |
R14154 | T19913 | T19909 | arg2Of | probe,For |
R14155 | T19913 | T19910 | arg1Of | probe,the |
R14156 | T19913 | T19911 | arg1Of | probe,36-bp |
R14157 | T19913 | T19912 | arg1Of | probe,WT |
R14158 | T19913 | T19914 | arg1Of | probe,: |
R14159 | T19915 | T19916 | arg1Of | 5′AATGCAGAACAAAGGGTCAGAACATTGTCTGCGAAG3′,( |
R14160 | T19915 | T19919 | arg1Of | 5′AATGCAGAACAAAGGGTCAGAACATTGTCTGCGAAG3′,; |
R14161 | T19915 | T19920 | arg1Of | 5′AATGCAGAACAAAGGGTCAGAACATTGTCTGCGAAG3′,for |
R14162 | T19915 | T19927 | arg1Of | 5′AATGCAGAACAAAGGGTCAGAACATTGTCTGCGAAG3′,: |
R14163 | T19917 | T19916 | arg2Of | MHB1556,( |
R14164 | T19918 | T19916 | arg3Of | ),( |
R14165 | T19922 | T19920 | arg2Of | probe,for |
R14166 | T19922 | T19921 | arg1Of | probe,mutant |
R14167 | T19922 | T19923 | arg1Of | probe,1 |
R14168 | T19922 | T19924 | arg1Of | probe,( |
R14169 | T19925 | T19924 | arg2Of | M1,( |
R14170 | T19926 | T19924 | arg3Of | ),( |
R14171 | T19928 | T19929 | arg1Of | 5′AACAAAGGGTCAGAACATTGTCTGCGAAG3′,( |
R14172 | T19928 | T19932 | arg1Of | 5′AACAAAGGGTCAGAACATTGTCTGCGAAG3′,; |
R14173 | T19928 | T19933 | arg1Of | 5′AACAAAGGGTCAGAACATTGTCTGCGAAG3′,for |
R14174 | T19928 | T19940 | arg1Of | 5′AACAAAGGGTCAGAACATTGTCTGCGAAG3′,: |
R14175 | T19930 | T19929 | arg2Of | MHB1644,( |
R14176 | T19931 | T19929 | arg3Of | ),( |
R14177 | T19935 | T19933 | arg2Of | probe,for |
R14178 | T19935 | T19934 | arg1Of | probe,mutant |
R14179 | T19935 | T19936 | arg1Of | probe,2 |
R14180 | T19935 | T19937 | arg1Of | probe,( |
R14181 | T19938 | T19937 | arg2Of | M2,( |
R14182 | T19939 | T19937 | arg3Of | ),( |
R14183 | T19941 | T19942 | arg1Of | 5′AATGCAGAACAAAGGGTCAGAtgagTGTCTGCGAAG3′,( |
R14184 | T19941 | T19945 | arg1Of | 5′AATGCAGAACAAAGGGTCAGAtgagTGTCTGCGAAG3′,; |
R14185 | T19941 | T19946 | arg1Of | 5′AATGCAGAACAAAGGGTCAGAtgagTGTCTGCGAAG3′,for |
R14186 | T19941 | T19953 | arg1Of | 5′AATGCAGAACAAAGGGTCAGAtgagTGTCTGCGAAG3′,: |
R14187 | T19943 | T19942 | arg2Of | MHB1648,( |
R14188 | T19944 | T19942 | arg3Of | ),( |
R14189 | T19948 | T19946 | arg2Of | probe,for |
R14190 | T19948 | T19947 | arg1Of | probe,mutant |
R14191 | T19948 | T19949 | arg1Of | probe,3 |
R14192 | T19948 | T19950 | arg1Of | probe,( |
R14193 | T19951 | T19950 | arg2Of | M3,( |
R14194 | T19952 | T19950 | arg3Of | ),( |
R14195 | T19954 | T19955 | arg1Of | 5′AATGCAGtgccAAGGGTCAGAACATTGTCTGCGAAG3′,( |
R14196 | T19956 | T19955 | arg2Of | MHB1650,( |
R14197 | T19957 | T19955 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19674 | 983-987 | Protein | denotes | Sox6 |
T19673 | 975-977 | Protein | denotes | HA |
T19672 | 968-973 | Protein | denotes | c-Myc |
T19671 | 316-319 | Protein | denotes | BSA |
T19670 | 220-224 | Protein | denotes | Sox6 |
T19669 | 99-123 | Protein | denotes | T4 polynucleotide kinase |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19959 | 983-987 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
T19958 | 220-224 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19662 | 209-219 | http://purl.obolibrary.org/obo/GO_0006412 | denotes | translated |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19677 | 988-998 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
T19676 | 537-545 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
T19675 | 263-270 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19682 | 988-998 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
T19681 | 537-545 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibody |
T19680 | 988-998 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
T19679 | 537-545 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibody |
T19678 | 183-188 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19661 | 1360-1411 | Sentence | denotes | 5′AATGCAGtgccAAGGGTCAGAACATTGTCTGCGAAG3′ (MHB1650). |
T19660 | 1283-1359 | Sentence | denotes | 5′AATGCAGAACAAAGGGTCAGAtgagTGTCTGCGAAG3′ (MHB1648); for mutant probe 3 (M3): |
T19659 | 1213-1282 | Sentence | denotes | 5′AACAAAGGGTCAGAACATTGTCTGCGAAG3′ (MHB1644); for mutant probe 2 (M2): |
T19658 | 1136-1212 | Sentence | denotes | 5′AATGCAGAACAAAGGGTCAGAACATTGTCTGCGAAG3′ (MHB1556); for mutant probe 1 (M1): |
T19657 | 1112-1135 | Sentence | denotes | For the 36-bp WT probe: |
T19656 | 1021-1111 | Sentence | denotes | The DNA sequences of the oligonucleotides are as follows (only forward oligos are listed): |
T19655 | 919-1020 | Sentence | denotes | Antibodies used for supershift analyses included c-Myc, HA, and Sox6 antibodies (described as above). |
T19654 | 786-918 | Sentence | denotes | Electrophoresis was performed at a constant 19 mAmp for 4–8 h at room temperature, and the gels were dried prior to autoradiography. |
T19653 | 621-785 | Sentence | denotes | Following addition of the radiolabeled probe, the samples were incubated for 30 min or 60 min at room temperature and loaded on a 4% or 6% (w/v) polyacrylamide gel. |
T19652 | 420-620 | Sentence | denotes | For competition or supershift assays, the indicated unlabelled oligonucleotide competitor (200-fold molar excess) or antibody (3 μl) was added 30 min to 60 min prior to addition of radiolabeled probe. |
T19651 | 279-419 | Sentence | denotes | 100 mM NaCl, 10% glycerol, 200 ng/μl BSA, 50 ng/μl poly (dI-dC) or poly (dG-dC), 10 mM HEPES (pH 7), 0.1 mM EDTA, 0.25 mM DTT, 0.6 mM MgCl2. |
T19650 | 125-278 | Sentence | denotes | EMSA was performed with 5 μg of nuclear proteins from MEL cells or 3 μl of in vitro-translated Sox6 along with the reticulocyte lysate in binding buffer: |
T19649 | 0-124 | Sentence | denotes | Single-stranded complementary oligonucleotides were annealed and end-labeled with [γ-32P] ATP with T4 polynucleotide kinase. |
T317 | 0-124 | Sentence | denotes | Single-stranded complementary oligonucleotides were annealed and end-labeled with [γ-32P] ATP with T4 polynucleotide kinase. |
T318 | 125-278 | Sentence | denotes | EMSA was performed with 5 μg of nuclear proteins from MEL cells or 3 μl of in vitro-translated Sox6 along with the reticulocyte lysate in binding buffer: |
T319 | 279-419 | Sentence | denotes | 100 mM NaCl, 10% glycerol, 200 ng/μl BSA, 50 ng/μl poly (dI-dC) or poly (dG-dC), 10 mM HEPES (pH 7), 0.1 mM EDTA, 0.25 mM DTT, 0.6 mM MgCl2. |
T320 | 420-620 | Sentence | denotes | For competition or supershift assays, the indicated unlabelled oligonucleotide competitor (200-fold molar excess) or antibody (3 μl) was added 30 min to 60 min prior to addition of radiolabeled probe. |
T321 | 621-785 | Sentence | denotes | Following addition of the radiolabeled probe, the samples were incubated for 30 min or 60 min at room temperature and loaded on a 4% or 6% (w/v) polyacrylamide gel. |
T322 | 786-918 | Sentence | denotes | Electrophoresis was performed at a constant 19 mAmp for 4–8 h at room temperature, and the gels were dried prior to autoradiography. |
T323 | 919-1020 | Sentence | denotes | Antibodies used for supershift analyses included c-Myc, HA, and Sox6 antibodies (described as above). |
T324 | 1021-1111 | Sentence | denotes | The DNA sequences of the oligonucleotides are as follows (only forward oligos are listed): |
T325 | 1112-1135 | Sentence | denotes | For the 36-bp WT probe: |
T326 | 1136-1212 | Sentence | denotes | 5′AATGCAGAACAAAGGGTCAGAACATTGTCTGCGAAG3′ (MHB1556); for mutant probe 1 (M1): |
T327 | 1213-1282 | Sentence | denotes | 5′AACAAAGGGTCAGAACATTGTCTGCGAAG3′ (MHB1644); for mutant probe 2 (M2): |
T328 | 1283-1359 | Sentence | denotes | 5′AATGCAGAACAAAGGGTCAGAtgagTGTCTGCGAAG3′ (MHB1648); for mutant probe 3 (M3): |
T329 | 1360-1411 | Sentence | denotes | 5′AATGCAGtgccAAGGGTCAGAACATTGTCTGCGAAG3′ (MHB1650). |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19693 | 983-987 | Protein | denotes | Sox6 |
T19692 | 975-977 | Protein | denotes | HA |
T19691 | 968-973 | Protein | denotes | c-Myc |
T19690 | 316-319 | Protein | denotes | BSA |
T19689 | 220-224 | Protein | denotes | Sox6 |
T19688 | 99-123 | Protein | denotes | T4 polynucleotide kinase |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20316 | 983-987 | Protein | denotes | Sox6 |
T20315 | 975-977 | Protein | denotes | HA |
T20314 | 968-973 | Protein | denotes | c-Myc |
T20313 | 316-319 | Protein | denotes | BSA |
T20312 | 220-224 | Protein | denotes | Sox6 |
T20311 | 99-123 | Protein | denotes | T4 polynucleotide kinase |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19965 | 983-987 | Protein | denotes | Sox6 |
T19964 | 975-977 | Protein | denotes | HA |
T19963 | 968-973 | Protein | denotes | c-Myc |
T19962 | 316-319 | Protein | denotes | BSA |
T19961 | 220-224 | Protein | denotes | Sox6 |
T19960 | 99-123 | Protein | denotes | T4 polynucleotide kinase |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19978 | 263-270 | Binding | denotes | binding |
T19977 | 983-987 | Protein | denotes | Sox6 |
T19976 | 975-977 | Protein | denotes | HA |
T19975 | 968-973 | Protein | denotes | c-Myc |
T19974 | 316-319 | Protein | denotes | BSA |
T19973 | 220-224 | Protein | denotes | Sox6 |
T19972 | 99-123 | Protein | denotes | T4 polynucleotide kinase |
R14198 | T19973 | T19978 | themeOf | Sox6,binding |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20310 | 983-998 | Entity | denotes | Sox6 antibodies |
T20309 | 975-977 | Protein | denotes | HA |
T20308 | 749-784 | Entity | denotes | a 4% or 6% (w/v) polyacrylamide gel |
T20307 | 537-552 | Protein | denotes | antibody (3 μl) |
T20306 | 919-934 | Entity | denotes | Antibodies used |
T20305 | 200-224 | Protein | denotes | in vitro-translated Sox6 |
T20304 | 352-357 | Protein | denotes | dG-dC |
T20303 | 1039-1062 | Entity | denotes | of the oligonucleotides |
T20302 | 90-123 | Entity | denotes | ATP with T4 polynucleotide kinase |
T20301 | 99-123 | Protein | denotes | T4 polynucleotide kinase |
T20300 | 240-252 | Entity | denotes | reticulocyte |
T20299 | 749-784 | Entity | denotes | a 4% or 6% (w/v) polyacrylamide gel |
T20298 | 968-973 | Protein | denotes | c-Myc |
T20297 | 292-304 | Entity | denotes | 10% glycerol |
T20296 | 0-46 | Entity | denotes | Single-stranded complementary oligonucleotides |
T20295 | 873-881 | Entity | denotes | the gels |
T20294 | 380-405 | Entity | denotes | 0.1 mM EDTA, 0.25 mM DTT, |
T20293 | 472-533 | Entity | denotes | unlabelled oligonucleotide competitor (200-fold molar excess) |
T20292 | 1208-1210 | Entity | denotes | M1 |
T20291 | 1278-1280 | Entity | denotes | M2 |
T20290 | 316-320 | Protein | denotes | BSA, |
T20289 | 330-342 | Entity | denotes | poly (dI-dC) |
T20288 | 1021-1077 | Entity | denotes | The DNA sequences of the oligonucleotides are as follows |
T20287 | 346-371 | Entity | denotes | poly (dG-dC), 10 mM HEPES |
T20286 | 157-188 | Protein | denotes | nuclear proteins from MEL cells |
T20285 | 842-867 | Entity | denotes | 4–8 h at room temperature |
T20284 | 393-404 | Entity | denotes | 0.25 mM DTT |
T20283 | 346-359 | Entity | denotes | poly (dG-dC), |
T20282 | 279-305 | Entity | denotes | 100 mM NaCl, 10% glycerol, |
T20281 | 819-837 | Entity | denotes | a constant 19 mAmp |
T20280 | 99-101 | Entity | denotes | T4 |
T20279 | 983-987 | Protein | denotes | Sox6 |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20273 | 1410-1411 | . | denotes | . |
T20272 | 1409-1410 | -RRB- | denotes | ) |
T20271 | 1402-1409 | NNP | denotes | MHB1650 |
T20270 | 1401-1402 | -LRB- | denotes | ( |
T20269 | 1399-1400 | NNP | denotes | ′ |
T20268 | 1362-1399 | NNP | denotes | AATGCAGtgccAAGGGTCAGAACATTGTCTGCGAAG3 |
T20267 | 1361-1362 | NN | denotes | ′ |
T20266 | 1360-1361 | CD | denotes | 5 |
T20265 | 1358-1359 | : | denotes | : |
T20264 | 1357-1358 | -RRB- | denotes | ) |
T20263 | 1355-1357 | NN | denotes | M3 |
T20262 | 1354-1355 | -LRB- | denotes | ( |
T20261 | 1352-1353 | CD | denotes | 3 |
T20260 | 1346-1351 | NN | denotes | probe |
T20259 | 1339-1345 | JJ | denotes | mutant |
T20258 | 1335-1338 | IN | denotes | for |
T20226 | 1188-1191 | IN | denotes | for |
T20225 | 1186-1187 | : | denotes | ; |
T20224 | 1185-1186 | -RRB- | denotes | ) |
T20223 | 1178-1185 | NNP | denotes | MHB1556 |
T20222 | 1177-1178 | -LRB- | denotes | ( |
T20221 | 1175-1176 | NNP | denotes | ′ |
T20220 | 1138-1175 | NNP | denotes | AATGCAGAACAAAGGGTCAGAACATTGTCTGCGAAG3 |
T20219 | 1137-1138 | CD | denotes | ′ |
T20218 | 1136-1137 | CD | denotes | 5 |
T20217 | 1134-1135 | : | denotes | : |
T20216 | 1129-1134 | NN | denotes | probe |
T20215 | 1126-1128 | NNP | denotes | WT |
T20214 | 1120-1125 | JJ | denotes | 36-bp |
T20213 | 1116-1119 | DT | denotes | the |
T20212 | 1112-1115 | IN | denotes | For |
T20211 | 1110-1111 | : | denotes | : |
T20210 | 1109-1110 | -RRB- | denotes | ) |
T20209 | 1103-1109 | VBN | denotes | listed |
T20208 | 1099-1102 | VBP | denotes | are |
T20207 | 1092-1098 | NNS | denotes | oligos |
T20206 | 1084-1091 | RB | denotes | forward |
T20205 | 1079-1083 | RB | denotes | only |
T20204 | 1078-1079 | -LRB- | denotes | ( |
T20203 | 1070-1077 | VBZ | denotes | follows |
T20202 | 1067-1069 | IN | denotes | as |
T20201 | 1063-1066 | VBP | denotes | are |
T20200 | 1046-1062 | NNS | denotes | oligonucleotides |
T20199 | 1042-1045 | DT | denotes | the |
T20198 | 1039-1041 | IN | denotes | of |
T20197 | 1029-1038 | NNS | denotes | sequences |
T20196 | 1025-1028 | NNP | denotes | DNA |
T20195 | 1021-1024 | DT | denotes | The |
T20194 | 1019-1020 | . | denotes | . |
T20193 | 1018-1019 | -RRB- | denotes | ) |
T20192 | 1013-1018 | IN | denotes | above |
T20191 | 1010-1012 | RB | denotes | as |
T20190 | 1000-1009 | VBN | denotes | described |
T20189 | 999-1000 | -LRB- | denotes | ( |
T20188 | 988-998 | NNS | denotes | antibodies |
T20187 | 983-987 | NNP | denotes | Sox6 |
T20186 | 979-982 | CC | denotes | and |
T20185 | 977-978 | , | denotes | , |
T20184 | 975-977 | NNP | denotes | HA |
T20183 | 973-974 | , | denotes | , |
T20182 | 968-973 | NNP | denotes | c-Myc |
T20181 | 959-967 | VBD | denotes | included |
T20180 | 950-958 | NNS | denotes | analyses |
T20179 | 939-949 | NN | denotes | supershift |
T20178 | 935-938 | IN | denotes | for |
T20177 | 930-934 | VBD | denotes | used |
T20176 | 919-929 | NNS | denotes | Antibodies |
T20175 | 917-918 | . | denotes | . |
T20174 | 902-917 | NN | denotes | autoradiography |
T20173 | 899-901 | TO | denotes | to |
T20172 | 893-898 | RB | denotes | prior |
T20171 | 887-892 | VBN | denotes | dried |
T20170 | 882-886 | VBD | denotes | were |
T20169 | 877-881 | NNS | denotes | gels |
T20168 | 873-876 | DT | denotes | the |
T20167 | 869-872 | CC | denotes | and |
T20166 | 867-868 | , | denotes | , |
T20165 | 856-867 | NN | denotes | temperature |
T20164 | 851-855 | NN | denotes | room |
T20163 | 848-850 | IN | denotes | at |
T20162 | 846-847 | NN | denotes | h |
T20161 | 844-845 | CD | denotes | 8 |
T20160 | 842-843 | CD | denotes | 4 |
T20159 | 838-841 | IN | denotes | for |
T20158 | 833-837 | NN | denotes | mAmp |
T20157 | 830-832 | CD | denotes | 19 |
T20156 | 821-829 | JJ | denotes | constant |
T20155 | 819-820 | DT | denotes | a |
T20154 | 816-818 | IN | denotes | at |
T20153 | 806-815 | VBN | denotes | performed |
T20152 | 802-805 | VBD | denotes | was |
T20151 | 786-801 | NNP | denotes | Electrophoresis |
T20150 | 784-785 | . | denotes | . |
T20149 | 781-784 | NN | denotes | gel |
T20148 | 766-780 | NN | denotes | polyacrylamide |
T20147 | 764-765 | -RRB- | denotes | ) |
T20146 | 761-764 | FW | denotes | w/v |
T20145 | 760-761 | -LRB- | denotes | ( |
T20144 | 758-759 | NN | denotes | % |
T20143 | 757-758 | CD | denotes | 6 |
T20142 | 754-756 | CC | denotes | or |
T20141 | 752-753 | NN | denotes | % |
T20140 | 751-752 | CD | denotes | 4 |
T20139 | 749-750 | DT | denotes | a |
T20138 | 746-748 | IN | denotes | on |
T20137 | 739-745 | VBN | denotes | loaded |
T20136 | 735-738 | CC | denotes | and |
T20135 | 723-734 | NN | denotes | temperature |
T20134 | 718-722 | NN | denotes | room |
T20133 | 715-717 | IN | denotes | at |
T20132 | 711-714 | NN | denotes | min |
T20131 | 708-710 | CD | denotes | 60 |
T20130 | 705-707 | CC | denotes | or |
T20129 | 701-704 | NN | denotes | min |
T20128 | 698-700 | CD | denotes | 30 |
T20127 | 694-697 | IN | denotes | for |
T20126 | 684-693 | VBN | denotes | incubated |
T20125 | 679-683 | VBD | denotes | were |
T20124 | 671-678 | NNS | denotes | samples |
T20123 | 667-670 | DT | denotes | the |
T20122 | 665-666 | , | denotes | , |
T20121 | 660-665 | NN | denotes | probe |
T20120 | 647-659 | JJ | denotes | radiolabeled |
T20119 | 643-646 | DT | denotes | the |
T20118 | 640-642 | IN | denotes | of |
T20117 | 631-639 | NN | denotes | addition |
T20116 | 621-630 | VBG | denotes | Following |
T20115 | 619-620 | . | denotes | . |
T20114 | 614-619 | NN | denotes | probe |
T20113 | 601-613 | JJ | denotes | radiolabeled |
T20112 | 598-600 | IN | denotes | of |
T20111 | 589-597 | NN | denotes | addition |
T20110 | 586-588 | TO | denotes | to |
T20109 | 580-585 | RB | denotes | prior |
T20108 | 576-579 | NN | denotes | min |
T20107 | 573-575 | CD | denotes | 60 |
T20106 | 570-572 | TO | denotes | to |
T20105 | 566-569 | NN | denotes | min |
T20104 | 563-565 | CD | denotes | 30 |
T20103 | 557-562 | VBN | denotes | added |
T20102 | 553-556 | VBD | denotes | was |
T20101 | 551-552 | -RRB- | denotes | ) |
T20100 | 549-551 | NN | denotes | μl |
T20099 | 547-548 | CD | denotes | 3 |
T20098 | 546-547 | -LRB- | denotes | ( |
T20097 | 537-545 | NN | denotes | antibody |
T20096 | 534-536 | CC | denotes | or |
T20095 | 532-533 | -RRB- | denotes | ) |
T20094 | 526-532 | NN | denotes | excess |
T20093 | 520-525 | NN | denotes | molar |
T20092 | 511-519 | JJ | denotes | 200-fold |
T20091 | 510-511 | -LRB- | denotes | ( |
T20090 | 499-509 | NN | denotes | competitor |
T20089 | 483-498 | NN | denotes | oligonucleotide |
T20088 | 472-482 | JJ | denotes | unlabelled |
T20087 | 462-471 | VBN | denotes | indicated |
T20086 | 458-461 | DT | denotes | the |
T20085 | 456-457 | , | denotes | , |
T20084 | 450-456 | NNS | denotes | assays |
T20083 | 439-449 | NN | denotes | supershift |
T20082 | 436-438 | CC | denotes | or |
T20081 | 424-435 | NN | denotes | competition |
T20080 | 420-423 | IN | denotes | For |
T20079 | 418-419 | . | denotes | . |
T20078 | 413-418 | NNP | denotes | MgCl2 |
T20077 | 410-412 | NNP | denotes | mM |
T20076 | 406-409 | CD | denotes | 0.6 |
T20075 | 404-405 | , | denotes | , |
T20074 | 401-404 | NNP | denotes | DTT |
T20073 | 398-400 | NNP | denotes | mM |
T20072 | 393-397 | CD | denotes | 0.25 |
T20071 | 391-392 | , | denotes | , |
T20070 | 387-391 | NNP | denotes | EDTA |
T20069 | 384-386 | NNP | denotes | mM |
T20068 | 380-383 | CD | denotes | 0.1 |
T20067 | 378-379 | , | denotes | , |
T20066 | 377-378 | -RRB- | denotes | ) |
T20065 | 376-377 | CD | denotes | 7 |
T20064 | 373-375 | NN | denotes | pH |
T20063 | 372-373 | -LRB- | denotes | ( |
T20062 | 366-371 | NNS | denotes | HEPES |
T20061 | 363-365 | NN | denotes | mM |
T20060 | 360-362 | CD | denotes | 10 |
T20059 | 358-359 | , | denotes | , |
T20058 | 357-358 | -RRB- | denotes | ) |
T20057 | 352-357 | JJ | denotes | dG-dC |
T20056 | 351-352 | -LRB- | denotes | ( |
T20055 | 346-350 | NN | denotes | poly |
T20054 | 343-345 | CC | denotes | or |
T20053 | 341-342 | -RRB- | denotes | ) |
T20052 | 336-341 | JJ | denotes | dI-dC |
T20051 | 335-336 | -LRB- | denotes | ( |
T20050 | 330-334 | NN | denotes | poly |
T20049 | 327-329 | NN | denotes | μl |
T20048 | 326-327 | NN | denotes | / |
T20047 | 324-326 | NN | denotes | ng |
T20046 | 321-323 | CD | denotes | 50 |
T20045 | 319-320 | , | denotes | , |
T20044 | 316-319 | NNP | denotes | BSA |
T20043 | 313-315 | NN | denotes | μl |
T20042 | 312-313 | NN | denotes | / |
T20041 | 310-312 | NN | denotes | ng |
T20040 | 306-309 | CD | denotes | 200 |
T20039 | 304-305 | , | denotes | , |
T20038 | 296-304 | NN | denotes | glycerol |
T20037 | 294-295 | NN | denotes | % |
T20036 | 292-294 | CD | denotes | 10 |
T20035 | 290-291 | , | denotes | , |
T20034 | 286-290 | NNP | denotes | NaCl |
T20033 | 283-285 | NNP | denotes | mM |
T20032 | 279-282 | CD | denotes | 100 |
T20031 | 277-278 | : | denotes | : |
T20030 | 271-277 | NN | denotes | buffer |
T20029 | 263-270 | JJ | denotes | binding |
T20028 | 260-262 | IN | denotes | in |
T20027 | 253-259 | NN | denotes | lysate |
T20026 | 240-252 | NN | denotes | reticulocyte |
T20025 | 236-239 | DT | denotes | the |
T20024 | 231-235 | IN | denotes | with |
T20023 | 225-230 | IN | denotes | along |
T20022 | 220-224 | NNS | denotes | Sox6 |
T20021 | 203-219 | JJ | denotes | vitro-translated |
T20020 | 200-202 | IN | denotes | in |
T20019 | 197-199 | IN | denotes | of |
T20018 | 194-196 | NN | denotes | μl |
T20017 | 192-193 | CD | denotes | 3 |
T20016 | 189-191 | CC | denotes | or |
T20015 | 183-188 | NNS | denotes | cells |
T20014 | 179-182 | NNP | denotes | MEL |
T20013 | 174-178 | IN | denotes | from |
T20012 | 165-173 | NNS | denotes | proteins |
T20011 | 157-164 | JJ | denotes | nuclear |
T19990 | 47-51 | VBD | denotes | were |
T19989 | 30-46 | NNS | denotes | oligonucleotides |
T19988 | 16-29 | JJ | denotes | complementary |
T19987 | 0-15 | JJ | denotes | Single-stranded |
T20257 | 1333-1334 | : | denotes | ; |
T20256 | 1332-1333 | -RRB- | denotes | ) |
T20255 | 1325-1332 | NNP | denotes | MHB1648 |
T20254 | 1324-1325 | -LRB- | denotes | ( |
T20253 | 1322-1323 | NNP | denotes | ′ |
T20252 | 1285-1322 | NNP | denotes | AATGCAGAACAAAGGGTCAGAtgagTGTCTGCGAAG3 |
T20251 | 1284-1285 | NN | denotes | ′ |
T20250 | 1283-1284 | CD | denotes | 5 |
T20249 | 1281-1282 | : | denotes | : |
T20248 | 1280-1281 | -RRB- | denotes | ) |
T20247 | 1278-1280 | NN | denotes | M2 |
T20246 | 1277-1278 | -LRB- | denotes | ( |
T20245 | 1275-1276 | CD | denotes | 2 |
T20244 | 1269-1274 | NN | denotes | probe |
T20243 | 1262-1268 | JJ | denotes | mutant |
T20242 | 1258-1261 | IN | denotes | for |
T20241 | 1256-1257 | : | denotes | ; |
T20240 | 1255-1256 | -RRB- | denotes | ) |
T20239 | 1248-1255 | NNP | denotes | MHB1644 |
T20238 | 1247-1248 | -LRB- | denotes | ( |
T20237 | 1245-1246 | NNP | denotes | ′ |
T20236 | 1215-1245 | NNP | denotes | AACAAAGGGTCAGAACATTGTCTGCGAAG3 |
T20235 | 1214-1215 | CD | denotes | ′ |
T20234 | 1213-1214 | CD | denotes | 5 |
T20233 | 1211-1212 | : | denotes | : |
T20232 | 1210-1211 | -RRB- | denotes | ) |
T20231 | 1208-1210 | NN | denotes | M1 |
T20230 | 1207-1208 | -LRB- | denotes | ( |
T20229 | 1205-1206 | CD | denotes | 1 |
T20228 | 1199-1204 | NN | denotes | probe |
T20227 | 1192-1198 | JJ | denotes | mutant |
T20010 | 154-156 | IN | denotes | of |
T20009 | 151-153 | NN | denotes | μg |
T20008 | 149-150 | CD | denotes | 5 |
T20007 | 144-148 | IN | denotes | with |
T20006 | 134-143 | VBN | denotes | performed |
T20005 | 130-133 | VBD | denotes | was |
T20004 | 125-129 | NNP | denotes | EMSA |
T20003 | 123-124 | . | denotes | . |
T20002 | 117-123 | NN | denotes | kinase |
T20001 | 102-116 | NN | denotes | polynucleotide |
T20000 | 99-101 | CD | denotes | T4 |
T19999 | 94-98 | IN | denotes | with |
T19998 | 90-93 | NNP | denotes | ATP |
T19997 | 88-89 | NNP | denotes | ] |
T19996 | 83-88 | NNP | denotes | γ-32P |
T19995 | 82-83 | NNP | denotes | [ |
T19994 | 77-81 | IN | denotes | with |
T19993 | 65-76 | JJ | denotes | end-labeled |
T19992 | 61-64 | CC | denotes | and |
T19991 | 52-60 | JJ | denotes | annealed |
R14201 | T19987 | T19989 | amod | Single-stranded,oligonucleotides |
R14202 | T19988 | T19989 | amod | complementary,oligonucleotides |
R14203 | T19989 | T19990 | nsubj | oligonucleotides,were |
R14204 | T19990 | T19990 | ROOT | were,were |
R14205 | T19991 | T19990 | acomp | annealed,were |
R14206 | T19992 | T19991 | cc | and,annealed |
R14207 | T19993 | T19991 | conj | end-labeled,annealed |
R14208 | T19994 | T19991 | prep | with,annealed |
R14209 | T19995 | T19998 | compound | [,ATP |
R14210 | T19996 | T19998 | compound | γ-32P,ATP |
R14211 | T19997 | T19998 | compound | ],ATP |
R14212 | T19998 | T19994 | pobj | ATP,with |
R14213 | T19999 | T19994 | prep | with,with |
R14214 | T20000 | T20002 | nummod | T4,kinase |
R14215 | T20001 | T20002 | compound | polynucleotide,kinase |
R14216 | T20002 | T19999 | pobj | kinase,with |
R14217 | T20003 | T19990 | punct | .,were |
R14218 | T20004 | T20006 | nsubjpass | EMSA,performed |
R14219 | T20005 | T20006 | auxpass | was,performed |
R14220 | T20006 | T20006 | ROOT | performed,performed |
R14221 | T20007 | T20006 | prep | with,performed |
R14222 | T20008 | T20009 | nummod | 5,μg |
R14223 | T20009 | T20007 | pobj | μg,with |
R14224 | T20010 | T20009 | prep | of,μg |
R14225 | T20011 | T20012 | amod | nuclear,proteins |
R14226 | T20012 | T20010 | pobj | proteins,of |
R14227 | T20013 | T20009 | prep | from,μg |
R14228 | T20014 | T20015 | compound | MEL,cells |
R14229 | T20015 | T20013 | pobj | cells,from |
R14230 | T20016 | T20015 | cc | or,cells |
R14231 | T20017 | T20018 | nummod | 3,μl |
R14232 | T20018 | T20015 | conj | μl,cells |
R14233 | T20019 | T20018 | prep | of,μl |
R14234 | T20020 | T20018 | prep | in,μl |
R14235 | T20021 | T20022 | amod | vitro-translated,Sox6 |
R14236 | T20022 | T20020 | pobj | Sox6,in |
R14237 | T20023 | T20009 | prep | along,μg |
R14238 | T20024 | T20023 | prep | with,along |
R14239 | T20025 | T20027 | det | the,lysate |
R14240 | T20026 | T20027 | compound | reticulocyte,lysate |
R14241 | T20027 | T20024 | pobj | lysate,with |
R14242 | T20028 | T20027 | prep | in,lysate |
R14243 | T20029 | T20030 | amod | binding,buffer |
R14244 | T20030 | T20028 | pobj | buffer,in |
R14245 | T20031 | T20009 | punct | :,μg |
R14246 | T20032 | T20034 | nummod | 100,NaCl |
R14247 | T20033 | T20034 | compound | mM,NaCl |
R14248 | T20034 | T20009 | appos | NaCl,μg |
R14249 | T20035 | T20034 | punct | ",",NaCl |
R14250 | T20036 | T20037 | nummod | 10,% |
R14251 | T20037 | T20038 | compound | %,glycerol |
R14252 | T20038 | T20034 | appos | glycerol,NaCl |
R14253 | T20039 | T20038 | punct | ",",glycerol |
R14254 | T20040 | T20041 | nummod | 200,ng |
R14255 | T20041 | T20050 | npadvmod | ng,poly |
R14256 | T20042 | T20044 | nmod | /,BSA |
R14257 | T20043 | T20044 | compound | μl,BSA |
R14258 | T20044 | T20050 | nmod | BSA,poly |
R14259 | T20045 | T20050 | punct | ",",poly |
R14260 | T20046 | T20047 | nummod | 50,ng |
R14261 | T20047 | T20050 | compound | ng,poly |
R14262 | T20048 | T20050 | compound | /,poly |
R14263 | T20049 | T20050 | compound | μl,poly |
R14264 | T20050 | T20009 | appos | poly,μg |
R14265 | T20051 | T20050 | punct | (,poly |
R14266 | T20052 | T20050 | appos | dI-dC,poly |
R14267 | T20053 | T20052 | punct | ),dI-dC |
R14268 | T20054 | T20052 | cc | or,dI-dC |
R14269 | T20055 | T20055 | ROOT | poly,poly |
R14270 | T20056 | T20057 | punct | (,dG-dC |
R14271 | T20057 | T20055 | appos | dG-dC,poly |
R14272 | T20058 | T20057 | punct | ),dG-dC |
R14273 | T20059 | T20055 | punct | ",",poly |
R14274 | T20060 | T20062 | nummod | 10,HEPES |
R14275 | T20061 | T20062 | compound | mM,HEPES |
R14276 | T20062 | T20055 | appos | HEPES,poly |
R14277 | T20063 | T20064 | punct | (,pH |
R14278 | T20064 | T20062 | parataxis | pH,HEPES |
R14279 | T20065 | T20064 | nummod | 7,pH |
R14280 | T20066 | T20064 | punct | ),pH |
R14281 | T20067 | T20064 | punct | ",",pH |
R14282 | T20068 | T20070 | nummod | 0.1,EDTA |
R14283 | T20069 | T20070 | compound | mM,EDTA |
R14284 | T20070 | T20064 | appos | EDTA,pH |
R14285 | T20071 | T20070 | punct | ",",EDTA |
R14286 | T20072 | T20074 | nummod | 0.25,DTT |
R14287 | T20073 | T20074 | compound | mM,DTT |
R14288 | T20074 | T20070 | appos | DTT,EDTA |
R14289 | T20075 | T20074 | punct | ",",DTT |
R14290 | T20076 | T20078 | nummod | 0.6,MgCl2 |
R14291 | T20077 | T20078 | compound | mM,MgCl2 |
R14292 | T20078 | T20074 | appos | MgCl2,DTT |
R14293 | T20079 | T20006 | punct | .,performed |
R14294 | T20080 | T20103 | prep | For,added |
R14295 | T20081 | T20080 | pobj | competition,For |
R14296 | T20082 | T20081 | cc | or,competition |
R14297 | T20083 | T20084 | compound | supershift,assays |
R14298 | T20084 | T20081 | conj | assays,competition |
R14299 | T20085 | T20084 | punct | ",",assays |
R14300 | T20086 | T20090 | det | the,competitor |
R14301 | T20087 | T20090 | amod | indicated,competitor |
R14302 | T20088 | T20090 | amod | unlabelled,competitor |
R14303 | T20089 | T20090 | compound | oligonucleotide,competitor |
R14304 | T20090 | T20084 | conj | competitor,assays |
R14305 | T20091 | T20090 | punct | (,competitor |
R14306 | T20092 | T20094 | amod | 200-fold,excess |
R14307 | T20093 | T20094 | compound | molar,excess |
R14308 | T20094 | T20090 | appos | excess,competitor |
R14309 | T20095 | T20090 | punct | ),competitor |
R14310 | T20096 | T20090 | cc | or,competitor |
R14311 | T20097 | T20090 | conj | antibody,competitor |
R14312 | T20098 | T20097 | punct | (,antibody |
R14313 | T20099 | T20100 | nummod | 3,μl |
R14314 | T20100 | T20097 | appos | μl,antibody |
R14315 | T20101 | T20097 | punct | ),antibody |
R14316 | T20102 | T20103 | auxpass | was,added |
R14317 | T20103 | T20103 | ROOT | added,added |
R14318 | T20104 | T20107 | quantmod | 30,60 |
R14319 | T20105 | T20107 | quantmod | min,60 |
R14320 | T20106 | T20107 | quantmod | to,60 |
R14321 | T20107 | T20103 | dobj | 60,added |
R14322 | T20108 | T20107 | quantmod | min,60 |
R14323 | T20109 | T20103 | advmod | prior,added |
R14324 | T20110 | T20103 | prep | to,added |
R14325 | T20111 | T20110 | pobj | addition,to |
R14326 | T20112 | T20111 | prep | of,addition |
R14327 | T20113 | T20114 | amod | radiolabeled,probe |
R14328 | T20114 | T20112 | pobj | probe,of |
R14329 | T20115 | T20103 | punct | .,added |
R14330 | T20116 | T20126 | prep | Following,incubated |
R14331 | T20117 | T20116 | pobj | addition,Following |
R14332 | T20118 | T20117 | prep | of,addition |
R14333 | T20119 | T20121 | det | the,probe |
R14334 | T20120 | T20121 | compound | radiolabeled,probe |
R14335 | T20121 | T20118 | pobj | probe,of |
R14336 | T20122 | T20126 | punct | ",",incubated |
R14337 | T20123 | T20124 | det | the,samples |
R14338 | T20124 | T20126 | nsubjpass | samples,incubated |
R14339 | T20125 | T20126 | auxpass | were,incubated |
R14340 | T20126 | T20126 | ROOT | incubated,incubated |
R14341 | T20127 | T20126 | prep | for,incubated |
R14342 | T20128 | T20129 | nummod | 30,min |
R14343 | T20129 | T20127 | pobj | min,for |
R14344 | T20130 | T20129 | cc | or,min |
R14345 | T20131 | T20132 | nummod | 60,min |
R14346 | T20132 | T20129 | conj | min,min |
R14347 | T20133 | T20132 | prep | at,min |
R14348 | T20134 | T20135 | compound | room,temperature |
R14349 | T20135 | T20133 | pobj | temperature,at |
R14350 | T20136 | T20132 | cc | and,min |
R14351 | T20137 | T20129 | acl | loaded,min |
R14352 | T20138 | T20137 | prep | on,loaded |
R14353 | T20139 | T20141 | det | a,% |
R14354 | T20140 | T20141 | nummod | 4,% |
R14355 | T20141 | T20138 | pobj | %,on |
R14356 | T20142 | T20141 | cc | or,% |
R14357 | T20143 | T20144 | nummod | 6,% |
R14358 | T20144 | T20141 | conj | %,% |
R14359 | T20145 | T20146 | punct | (,w/v |
R14360 | T20146 | T20144 | appos | w/v,% |
R14361 | T20147 | T20126 | punct | ),incubated |
R14362 | T20148 | T20149 | compound | polyacrylamide,gel |
R14363 | T20149 | T20149 | ROOT | gel,gel |
R14364 | T20150 | T20149 | punct | .,gel |
R14365 | T20151 | T20153 | nsubjpass | Electrophoresis,performed |
R14366 | T20152 | T20153 | auxpass | was,performed |
R14367 | T20153 | T20153 | ROOT | performed,performed |
R14368 | T20154 | T20153 | prep | at,performed |
R14369 | T20155 | T20158 | det | a,mAmp |
R14370 | T20156 | T20158 | amod | constant,mAmp |
R14371 | T20157 | T20158 | nummod | 19,mAmp |
R14372 | T20158 | T20154 | pobj | mAmp,at |
R14373 | T20159 | T20153 | prep | for,performed |
R14374 | T20160 | T20159 | pobj | 4,for |
R14375 | T20161 | T20162 | nummod | 8,h |
R14376 | T20162 | T20171 | nsubjpass | h,dried |
R14377 | T20163 | T20162 | prep | at,h |
R14378 | T20164 | T20165 | compound | room,temperature |
R14379 | T20165 | T20163 | pobj | temperature,at |
R14380 | T20166 | T20162 | punct | ",",h |
R14381 | T20167 | T20162 | cc | and,h |
R14382 | T20168 | T20169 | det | the,gels |
R14383 | T20169 | T20162 | conj | gels,h |
R14384 | T20170 | T20171 | auxpass | were,dried |
R14385 | T20171 | T20153 | conj | dried,performed |
R14386 | T20172 | T20171 | advmod | prior,dried |
R14387 | T20173 | T20172 | prep | to,prior |
R14388 | T20174 | T20173 | pobj | autoradiography,to |
R14389 | T20175 | T20171 | punct | .,dried |
R14390 | T20176 | T20177 | nsubj | Antibodies,used |
R14391 | T20177 | T20177 | ROOT | used,used |
R14392 | T20178 | T20177 | prep | for,used |
R14393 | T20179 | T20180 | compound | supershift,analyses |
R14394 | T20180 | T20178 | pobj | analyses,for |
R14395 | T20181 | T20177 | conj | included,used |
R14396 | T20182 | T20188 | nmod | c-Myc,antibodies |
R14397 | T20183 | T20182 | punct | ",",c-Myc |
R14398 | T20184 | T20182 | conj | HA,c-Myc |
R14399 | T20185 | T20184 | punct | ",",HA |
R14400 | T20186 | T20184 | cc | and,HA |
R14401 | T20187 | T20184 | conj | Sox6,HA |
R14402 | T20188 | T20181 | dobj | antibodies,included |
R14403 | T20189 | T20188 | punct | (,antibodies |
R14404 | T20190 | T20188 | acl | described,antibodies |
R14405 | T20191 | T20190 | prep | as,described |
R14406 | T20192 | T20191 | pcomp | above,as |
R14407 | T20193 | T20188 | punct | ),antibodies |
R14408 | T20194 | T20177 | punct | .,used |
R14409 | T20195 | T20197 | det | The,sequences |
R14410 | T20196 | T20197 | compound | DNA,sequences |
R14411 | T20197 | T20201 | nsubj | sequences,are |
R14412 | T20198 | T20197 | prep | of,sequences |
R14413 | T20199 | T20200 | det | the,oligonucleotides |
R14414 | T20200 | T20198 | pobj | oligonucleotides,of |
R14415 | T20201 | T20201 | ROOT | are,are |
R14416 | T20202 | T20203 | mark | as,follows |
R14417 | T20203 | T20201 | advcl | follows,are |
R14418 | T20204 | T20209 | punct | (,listed |
R14419 | T20205 | T20206 | advmod | only,forward |
R14420 | T20206 | T20209 | advmod | forward,listed |
R14421 | T20207 | T20209 | nsubjpass | oligos,listed |
R14422 | T20208 | T20209 | auxpass | are,listed |
R14423 | T20209 | T20201 | advcl | listed,are |
R14424 | T20210 | T20209 | punct | ),listed |
R14425 | T20211 | T20237 | punct | :,′ |
R14426 | T20212 | T20237 | prep | For,′ |
R14427 | T20213 | T20216 | det | the,probe |
R14428 | T20214 | T20216 | amod | 36-bp,probe |
R14429 | T20215 | T20216 | compound | WT,probe |
R14430 | T20216 | T20212 | pobj | probe,For |
R14431 | T20217 | T20237 | punct | :,′ |
R14432 | T20218 | T20221 | nummod | 5,′ |
R14433 | T20219 | T20221 | nummod | ′,′ |
R14434 | T20220 | T20221 | compound | AATGCAGAACAAAGGGTCAGAACATTGTCTGCGAAG3,′ |
R14435 | T20221 | T20237 | npadvmod | ′,′ |
R14436 | T20222 | T20223 | punct | (,MHB1556 |
R14437 | T20223 | T20221 | appos | MHB1556,′ |
R14438 | T20224 | T20223 | punct | ),MHB1556 |
R14439 | T20225 | T20237 | punct | ;,′ |
R14440 | T20226 | T20237 | prep | for,′ |
R14441 | T20227 | T20228 | amod | mutant,probe |
R14442 | T20228 | T20226 | pobj | probe,for |
R14443 | T20229 | T20228 | nummod | 1,probe |
R14444 | T20230 | T20228 | punct | (,probe |
R14445 | T20231 | T20228 | appos | M1,probe |
R14446 | T20232 | T20228 | punct | ),probe |
R14447 | T20233 | T20237 | punct | :,′ |
R14448 | T20234 | T20237 | nummod | 5,′ |
R14449 | T20235 | T20237 | nummod | ′,′ |
R14450 | T20236 | T20237 | compound | AACAAAGGGTCAGAACATTGTCTGCGAAG3,′ |
R14451 | T20237 | T20237 | ROOT | ′,′ |
R14452 | T20238 | T20239 | punct | (,MHB1644 |
R14453 | T20239 | T20237 | appos | MHB1644,′ |
R14454 | T20240 | T20239 | punct | ),MHB1644 |
R14455 | T20241 | T20253 | punct | ;,′ |
R14456 | T20242 | T20253 | prep | for,′ |
R14457 | T20243 | T20244 | amod | mutant,probe |
R14458 | T20244 | T20242 | pobj | probe,for |
R14459 | T20245 | T20244 | nummod | 2,probe |
R14460 | T20246 | T20244 | punct | (,probe |
R14461 | T20247 | T20244 | appos | M2,probe |
R14462 | T20248 | T20244 | punct | ),probe |
R14463 | T20249 | T20253 | punct | :,′ |
R14464 | T20250 | T20251 | nummod | 5,′ |
R14465 | T20251 | T20253 | compound | ′,′ |
R14466 | T20252 | T20253 | compound | AATGCAGAACAAAGGGTCAGAtgagTGTCTGCGAAG3,′ |
R14467 | T20253 | T20237 | conj | ′,′ |
R14468 | T20254 | T20253 | punct | (,′ |
R14469 | T20255 | T20253 | appos | MHB1648,′ |
R14470 | T20256 | T20253 | punct | ),′ |
R14471 | T20257 | T20253 | punct | ;,′ |
R14472 | T20258 | T20258 | ROOT | for,for |
R14473 | T20259 | T20260 | amod | mutant,probe |
R14474 | T20260 | T20258 | pobj | probe,for |
R14475 | T20261 | T20260 | nummod | 3,probe |
R14476 | T20262 | T20260 | punct | (,probe |
R14477 | T20263 | T20260 | appos | M3,probe |
R14478 | T20264 | T20260 | punct | ),probe |
R14479 | T20265 | T20258 | punct | :,for |
R14480 | T20266 | T20267 | nummod | 5,′ |
R14481 | T20267 | T20269 | compound | ′,′ |
R14482 | T20268 | T20269 | compound | AATGCAGtgccAAGGGTCAGAACATTGTCTGCGAAG3,′ |
R14483 | T20269 | T20269 | ROOT | ′,′ |
R14484 | T20270 | T20269 | punct | (,′ |
R14485 | T20271 | T20269 | appos | MHB1650,′ |
R14486 | T20272 | T20269 | punct | ),′ |
R14487 | T20273 | T20237 | punct | .,′ |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19687 | 983-987 | Protein | denotes | Sox6 |
T19686 | 975-977 | Protein | denotes | HA |
T19685 | 968-973 | Protein | denotes | c-Myc |
T19684 | 220-224 | Protein | denotes | Sox6 |
T19683 | 99-123 | Protein | denotes | T4 polynucleotide kinase |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19635 | 983-987 | Protein | denotes | Sox6 |
T19634 | 975-977 | Protein | denotes | HA |
T19633 | 968-973 | Protein | denotes | c-Myc |
T19632 | 316-319 | Protein | denotes | BSA |
T19631 | 220-224 | Protein | denotes | Sox6 |
T19630 | 99-123 | Protein | denotes | T4 polynucleotide kinase |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19647 | 983-987 | Protein | denotes | Sox6 |
T19646 | 975-977 | Protein | denotes | HA |
T19645 | 968-973 | Protein | denotes | c-Myc |
T19644 | 316-319 | Protein | denotes | BSA |
T19643 | 220-224 | Protein | denotes | Sox6 |
T19642 | 99-123 | Protein | denotes | T4 polynucleotide kinase |
T19641 | 983-987 | Protein | denotes | Sox6 |
T19640 | 975-977 | Protein | denotes | HA |
T19639 | 968-973 | Protein | denotes | c-Myc |
T19638 | 316-319 | Protein | denotes | BSA |
T19637 | 220-224 | Protein | denotes | Sox6 |
T19636 | 99-123 | Protein | denotes | T4 polynucleotide kinase |
R13934 | T19644 | T19643 | themeOf | BSA,Sox6 |