PMC:1359074 / 26735-26860
Annnotations
{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/1359074","sourcedb":"PMC","sourceid":"1359074","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1359074","text":"Functionally, both sites are essential for Sox6 binding to the ɛy promoter and repression of its activity (Figure 3E and 3F).","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T12062","span":{"begin":123,"end":124},"obj":"-RRB-"},{"id":"T12061","span":{"begin":121,"end":123},"obj":"NN"},{"id":"T12060","span":{"begin":117,"end":120},"obj":"CC"},{"id":"T12059","span":{"begin":114,"end":116},"obj":"NN"},{"id":"T12058","span":{"begin":107,"end":113},"obj":"NN"},{"id":"T12057","span":{"begin":106,"end":107},"obj":"-LRB-"},{"id":"T12056","span":{"begin":97,"end":105},"obj":"NN"},{"id":"T12055","span":{"begin":93,"end":96},"obj":"PRP-DOLLAR-"},{"id":"T12054","span":{"begin":90,"end":92},"obj":"IN"},{"id":"T12053","span":{"begin":79,"end":89},"obj":"NN"},{"id":"T12052","span":{"begin":75,"end":78},"obj":"CC"},{"id":"T12051","span":{"begin":66,"end":74},"obj":"NN"},{"id":"T12050","span":{"begin":63,"end":65},"obj":"JJ"},{"id":"T12049","span":{"begin":59,"end":62},"obj":"DT"},{"id":"T12048","span":{"begin":56,"end":58},"obj":"TO"},{"id":"T12047","span":{"begin":48,"end":55},"obj":"NN"},{"id":"T12046","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T12045","span":{"begin":39,"end":42},"obj":"IN"},{"id":"T12044","span":{"begin":29,"end":38},"obj":"JJ"},{"id":"T12043","span":{"begin":25,"end":28},"obj":"VB"},{"id":"T12042","span":{"begin":19,"end":24},"obj":"NN"},{"id":"T12041","span":{"begin":14,"end":18},"obj":"DT"},{"id":"T12040","span":{"begin":12,"end":13},"obj":"-COMMA-"},{"id":"T12039","span":{"begin":0,"end":12},"obj":"RB"}],"relations":[{"id":"R7908","pred":"arg1Of","subj":"T12042","obj":"T12041"},{"id":"R7909","pred":"arg1Of","subj":"T12042","obj":"T12043"},{"id":"R7910","pred":"arg1Of","subj":"T12042","obj":"T12044"},{"id":"R7911","pred":"arg1Of","subj":"T12043","obj":"T12039"},{"id":"R7912","pred":"arg1Of","subj":"T12043","obj":"T12040"},{"id":"R7913","pred":"arg2Of","subj":"T12044","obj":"T12043"},{"id":"R7914","pred":"arg1Of","subj":"T12044","obj":"T12045"},{"id":"R7915","pred":"arg2Of","subj":"T12047","obj":"T12045"},{"id":"R7916","pred":"arg1Of","subj":"T12047","obj":"T12046"},{"id":"R7917","pred":"arg1Of","subj":"T12047","obj":"T12048"},{"id":"R7918","pred":"arg1Of","subj":"T12051","obj":"T12052"},{"id":"R7919","pred":"arg2Of","subj":"T12052","obj":"T12048"},{"id":"R7920","pred":"arg1Of","subj":"T12052","obj":"T12049"},{"id":"R7921","pred":"arg1Of","subj":"T12052","obj":"T12050"},{"id":"R7922","pred":"arg1Of","subj":"T12052","obj":"T12054"},{"id":"R7923","pred":"arg1Of","subj":"T12052","obj":"T12057"},{"id":"R7924","pred":"arg2Of","subj":"T12053","obj":"T12052"},{"id":"R7925","pred":"arg2Of","subj":"T12056","obj":"T12054"},{"id":"R7926","pred":"arg1Of","subj":"T12056","obj":"T12055"},{"id":"R7927","pred":"arg1Of","subj":"T12059","obj":"T12058"},{"id":"R7928","pred":"arg1Of","subj":"T12059","obj":"T12060"},{"id":"R7929","pred":"arg2Of","subj":"T12060","obj":"T12057"},{"id":"R7930","pred":"arg2Of","subj":"T12061","obj":"T12060"},{"id":"R7931","pred":"arg3Of","subj":"T12062","obj":"T12057"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T12062","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12061","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12060","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12059","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12058","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12057","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12056","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12055","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12054","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12053","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12052","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12051","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12050","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12049","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12048","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12047","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12046","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12045","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12044","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12043","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12042","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12041","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12040","pred":"source","obj":"pmc-enju-pas"},{"subj":"T12039","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T11481","span":{"begin":63,"end":65},"obj":"Protein"},{"id":"T11480","span":{"begin":43,"end":47},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T11481","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T11480","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T13258","span":{"begin":43,"end":47},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T13258","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-MF","denotations":[{"id":"T11582","span":{"begin":48,"end":55},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"attributes":[{"subj":"T11582","pred":"source","obj":"GO-MF"}]},{"project":"sentences","denotations":[{"id":"T11158","span":{"begin":0,"end":125},"obj":"Sentence"},{"id":"T207","span":{"begin":0,"end":125},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T11158","pred":"source","obj":"sentences"},{"subj":"T207","pred":"source","obj":"sentences"}]},{"project":"simple1","denotations":[{"id":"T11745","span":{"begin":63,"end":65},"obj":"Protein"},{"id":"T11744","span":{"begin":43,"end":47},"obj":"Protein"}],"attributes":[{"subj":"T11745","pred":"source","obj":"simple1"},{"subj":"T11744","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T15798","span":{"begin":48,"end":55},"obj":"Binding"},{"id":"T15797","span":{"begin":79,"end":89},"obj":"Negative_regulation"},{"id":"T15796","span":{"begin":29,"end":38},"obj":"Positive_regulation"},{"id":"T15716","span":{"begin":63,"end":65},"obj":"Protein"},{"id":"T15715","span":{"begin":43,"end":47},"obj":"Protein"}],"relations":[{"id":"R11008","pred":"themeOf","subj":"T15715","obj":"T15798"},{"id":"R11049","pred":"themeOf","subj":"T15798","obj":"T15797"},{"id":"R11050","pred":"themeOf","subj":"T15798","obj":"T15796"}],"attributes":[{"subj":"T15798","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T15797","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T15796","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T15716","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T15715","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T13385","span":{"begin":29,"end":38},"obj":"Positive_regulation"},{"id":"T13384","span":{"begin":48,"end":55},"obj":"Binding"},{"id":"T13306","span":{"begin":63,"end":65},"obj":"Protein"},{"id":"T13305","span":{"begin":43,"end":47},"obj":"Protein"}],"relations":[{"id":"R9178","pred":"themeOf","subj":"T13305","obj":"T13384"},{"id":"R9181","pred":"themeOf","subj":"T13306","obj":"T13384"},{"id":"R9218","pred":"themeOf","subj":"T13384","obj":"T13385"}],"attributes":[{"subj":"T13385","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T13384","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T13306","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T13305","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T13636","span":{"begin":29,"end":38},"obj":"Positive_regulation"},{"id":"T13635","span":{"begin":79,"end":89},"obj":"Negative_regulation"},{"id":"T13634","span":{"begin":48,"end":55},"obj":"Binding"},{"id":"T13552","span":{"begin":63,"end":65},"obj":"Protein"},{"id":"T13551","span":{"begin":43,"end":47},"obj":"Protein"}],"relations":[{"id":"R9278","pred":"themeOf","subj":"T13551","obj":"T13634"},{"id":"R9281","pred":"themeOf","subj":"T13552","obj":"T13634"},{"id":"R9318","pred":"themeOf","subj":"T13634","obj":"T13635"},{"id":"R9319","pred":"themeOf","subj":"T13634","obj":"T13636"},{"id":"R9321","pred":"themeOf","subj":"T13635","obj":"T13636"}],"attributes":[{"subj":"T13636","pred":"source","obj":"DLUT931"},{"subj":"T13635","pred":"source","obj":"DLUT931"},{"subj":"T13634","pred":"source","obj":"DLUT931"},{"subj":"T13552","pred":"source","obj":"DLUT931"},{"subj":"T13551","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T15590","span":{"begin":63,"end":65},"obj":"Protein"},{"id":"T15506","span":{"begin":14,"end":24},"obj":"Entity"},{"id":"T15447","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T15632","span":{"begin":59,"end":74},"obj":"Entity"}],"relations":[{"id":"R10994","pred":"partOf","subj":"T15632","obj":"T15590"}],"attributes":[{"subj":"T15590","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T15506","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T15447","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T15632","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T14059","span":{"begin":124,"end":125},"obj":"."},{"id":"T14058","span":{"begin":123,"end":124},"obj":"-RRB-"},{"id":"T14057","span":{"begin":121,"end":123},"obj":"CD"},{"id":"T14056","span":{"begin":117,"end":120},"obj":"CC"},{"id":"T14055","span":{"begin":114,"end":116},"obj":"CD"},{"id":"T14054","span":{"begin":107,"end":113},"obj":"NN"},{"id":"T14053","span":{"begin":106,"end":107},"obj":"-LRB-"},{"id":"T14052","span":{"begin":97,"end":105},"obj":"NN"},{"id":"T14051","span":{"begin":93,"end":96},"obj":"PRP$"},{"id":"T14050","span":{"begin":90,"end":92},"obj":"IN"},{"id":"T14049","span":{"begin":79,"end":89},"obj":"NN"},{"id":"T14048","span":{"begin":75,"end":78},"obj":"CC"},{"id":"T14047","span":{"begin":66,"end":74},"obj":"NN"},{"id":"T14046","span":{"begin":63,"end":65},"obj":"JJ"},{"id":"T14045","span":{"begin":59,"end":62},"obj":"DT"},{"id":"T14044","span":{"begin":56,"end":58},"obj":"TO"},{"id":"T14043","span":{"begin":48,"end":55},"obj":"JJ"},{"id":"T14042","span":{"begin":43,"end":47},"obj":"JJ"},{"id":"T14041","span":{"begin":39,"end":42},"obj":"IN"},{"id":"T14040","span":{"begin":29,"end":38},"obj":"JJ"},{"id":"T14039","span":{"begin":25,"end":28},"obj":"VBP"},{"id":"T14038","span":{"begin":19,"end":24},"obj":"NNS"},{"id":"T14037","span":{"begin":14,"end":18},"obj":"DT"},{"id":"T14036","span":{"begin":12,"end":13},"obj":","},{"id":"T14035","span":{"begin":0,"end":12},"obj":"RB"}],"relations":[{"id":"R9758","pred":"advmod","subj":"T14035","obj":"T14039"},{"id":"R9764","pred":"punct","subj":"T14036","obj":"T14039"},{"id":"R9769","pred":"det","subj":"T14037","obj":"T14038"},{"id":"R9772","pred":"nsubj","subj":"T14038","obj":"T14039"},{"id":"R9776","pred":"ROOT","subj":"T14039","obj":"T14039"},{"id":"R9780","pred":"acomp","subj":"T14040","obj":"T14039"},{"id":"R9784","pred":"prep","subj":"T14041","obj":"T14040"},{"id":"R9788","pred":"amod","subj":"T14042","obj":"T14043"},{"id":"R9792","pred":"amod","subj":"T14043","obj":"T14041"},{"id":"R9793","pred":"prep","subj":"T14044","obj":"T14043"},{"id":"R9794","pred":"det","subj":"T14045","obj":"T14047"},{"id":"R9796","pred":"amod","subj":"T14046","obj":"T14047"},{"id":"R9800","pred":"pobj","subj":"T14047","obj":"T14044"},{"id":"R9804","pred":"cc","subj":"T14048","obj":"T14047"},{"id":"R9808","pred":"conj","subj":"T14049","obj":"T14047"},{"id":"R9810","pred":"prep","subj":"T14050","obj":"T14047"},{"id":"R9815","pred":"poss","subj":"T14051","obj":"T14052"},{"id":"R9818","pred":"pobj","subj":"T14052","obj":"T14050"},{"id":"R9822","pred":"punct","subj":"T14053","obj":"T14054"},{"id":"R9826","pred":"appos","subj":"T14054","obj":"T14047"},{"id":"R9830","pred":"nummod","subj":"T14055","obj":"T14054"},{"id":"R9834","pred":"cc","subj":"T14056","obj":"T14054"},{"id":"R9838","pred":"conj","subj":"T14057","obj":"T14054"},{"id":"R9842","pred":"punct","subj":"T14058","obj":"T14039"},{"id":"R9846","pred":"punct","subj":"T14059","obj":"T14039"}],"attributes":[{"subj":"T14059","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14058","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14057","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14056","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14055","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14054","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14053","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14052","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14051","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14050","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14049","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14048","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14047","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14046","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14045","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14044","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14043","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14042","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14041","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14040","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14039","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14038","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14037","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14036","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T14035","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T13422","span":{"begin":29,"end":38},"obj":"Positive_regulation"},{"id":"T13421","span":{"begin":79,"end":89},"obj":"Negative_regulation"},{"id":"T13285","span":{"begin":48,"end":55},"obj":"Binding"},{"id":"T13247","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T13248","span":{"begin":66,"end":74},"obj":"Entity"}],"relations":[{"id":"R9118","pred":"themeOf","subj":"T13247","obj":"T13285"},{"id":"R9124","pred":"Site","subj":"T13248","obj":"T13285"},{"id":"R9147","pred":"themeOf","subj":"T13285","obj":"T13421"},{"id":"R9148","pred":"themeOf","subj":"T13285","obj":"T13422"}],"attributes":[{"subj":"T13422","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T13421","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T13285","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T13247","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T13248","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"testone","denotations":[{"id":"T10798","span":{"begin":63,"end":65},"obj":"Protein"},{"id":"T10797","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T10886","span":{"begin":48,"end":55},"obj":"Binding"}],"relations":[{"id":"R7442","pred":"themeOf","subj":"T10797","obj":"T10886"}],"attributes":[{"subj":"T10798","pred":"source","obj":"testone"},{"subj":"T10797","pred":"source","obj":"testone"},{"subj":"T10886","pred":"source","obj":"testone"}]},{"project":"test3","denotations":[{"id":"T11047","span":{"begin":63,"end":65},"obj":"Protein"},{"id":"T11046","span":{"begin":48,"end":55},"obj":"Binding"},{"id":"T11045","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T10943","span":{"begin":63,"end":65},"obj":"Protein"},{"id":"T10942","span":{"begin":43,"end":47},"obj":"Protein"}],"relations":[{"id":"R7502","pred":"themeOf","subj":"T11045","obj":"T11046"}],"attributes":[{"subj":"T11047","pred":"source","obj":"test3"},{"subj":"T11046","pred":"source","obj":"test3"},{"subj":"T11045","pred":"source","obj":"test3"},{"subj":"T10943","pred":"source","obj":"test3"},{"subj":"T10942","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#93eca0","default":true},{"id":"bionlp-st-ge-2016-test-proteins","color":"#ec939f"},{"id":"bionlp-st-ge-2016-uniprot","color":"#93b9ec"},{"id":"GO-MF","color":"#d3ec93"},{"id":"sentences","color":"#eb93ec"},{"id":"simple1","color":"#93ecd0"},{"id":"BioNLP16_DUT","color":"#ecb693"},{"id":"BioNLP16_Messiy","color":"#9c93ec"},{"id":"DLUT931","color":"#a3ec93"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#ec93bd"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#93d7ec"},{"id":"bionlp-st-ge-2016-test-tees","color":"#ece793"},{"id":"testone","color":"#cd93ec"},{"id":"test3","color":"#93ecb3"}]}]}}