> top > docs > PMC:1359074 > spans > 26138-26308 > annotations

PMC:1359074 / 26138-26308 JSONTXT

Annnotations TAB JSON ListView MergeView

2_test

Id Subject Object Predicate Lexical cue
16462943-9755172-85761001 167-168 9755172 denotes 6
T8724 167-168 9755172 denotes 6

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T11958 168-169 -RRB- denotes ]
T11957 167-168 CD denotes 6
T11956 166-167 -LRB- denotes [
T11955 160-165 NN denotes sites
T11954 156-159 NN denotes Sox
T11953 147-155 JJ denotes adjacent
T11952 138-146 VB denotes contains
T11951 133-137 WDT denotes that
T11950 129-132 NN denotes DNA
T11949 126-128 TO denotes to
T11948 117-125 NN denotes proteins
T11947 113-116 NN denotes Sox
T11946 109-112 CD denotes two
T11945 105-108 DT denotes the
T11944 102-104 IN denotes of
T11943 91-101 NN denotes efficiency
T11942 83-90 VB denotes binding
T11941 79-82 DT denotes the
T11940 70-78 VB denotes increase
T11939 62-69 RB denotes greatly
T11938 59-61 TO denotes to
T11937 53-58 VB denotes shown
T11936 48-52 VB denotes been
T11935 44-47 VB denotes has
T11934 39-43 NN denotes Sox6
T11933 35-38 CC denotes and
T11932 30-34 NN denotes Sox5
T11931 27-29 IN denotes of
T11930 14-26 NN denotes dimerization
T11929 12-13 -COMMA- denotes ,
T11928 0-12 RB denotes Functionally
R7798 T11930 T11931 arg1Of dimerization,of
R7799 T11930 T11935 arg1Of dimerization,has
R7800 T11930 T11936 arg1Of dimerization,been
R7801 T11930 T11937 arg2Of dimerization,shown
R7802 T11930 T11940 arg1Of dimerization,increase
R7803 T11932 T11933 arg1Of Sox5,and
R7804 T11933 T11931 arg2Of and,of
R7805 T11934 T11933 arg2Of Sox6,and
R7806 T11937 T11928 arg1Of shown,Functionally
R7807 T11937 T11929 arg1Of shown,","
R7808 T11937 T11935 arg2Of shown,has
R7809 T11937 T11936 arg2Of shown,been
R7810 T11940 T11937 arg3Of increase,shown
R7811 T11940 T11938 arg1Of increase,to
R7812 T11940 T11939 arg1Of increase,greatly
R7813 T11943 T11940 arg2Of efficiency,increase
R7814 T11943 T11941 arg1Of efficiency,the
R7815 T11943 T11942 arg1Of efficiency,binding
R7816 T11943 T11944 arg1Of efficiency,of
R7817 T11943 T11949 arg1Of efficiency,to
R7818 T11943 T11951 arg1Of efficiency,that
R7819 T11943 T11952 arg1Of efficiency,contains
R7820 T11948 T11944 arg2Of proteins,of
R7821 T11948 T11945 arg1Of proteins,the
R7822 T11948 T11946 arg1Of proteins,two
R7823 T11948 T11947 arg1Of proteins,Sox
R7824 T11950 T11949 arg2Of DNA,to
R7825 T11955 T11952 arg2Of sites,contains
R7826 T11955 T11953 arg1Of sites,adjacent
R7827 T11955 T11954 arg1Of sites,Sox
R7828 T11955 T11956 arg1Of sites,[
R7829 T11957 T11956 arg2Of 6,[
R7830 T11958 T11956 arg3Of ],[

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T11448 39-43 Antecedent denotes Sox6
T11447 30-34 Antecedent denotes Sox5
T11446 105-125 Anaphor denotes the two Sox proteins
R7669 T11446 T11447 boundBy the two Sox proteins,Sox5
R7670 T11446 T11448 boundBy the two Sox proteins,Sox6

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11475 39-43 Protein denotes Sox6
T11474 30-34 Protein denotes Sox5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T13253 39-43 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-MF

Id Subject Object Predicate Lexical cue
T11579 83-90 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T11154 0-170 Sentence denotes Functionally, dimerization of Sox5 and Sox6 has been shown to greatly increase the binding efficiency of the two Sox proteins to DNA that contains adjacent Sox sites [6].
T203 0-170 Sentence denotes Functionally, dimerization of Sox5 and Sox6 has been shown to greatly increase the binding efficiency of the two Sox proteins to DNA that contains adjacent Sox sites [6].

simple1

Id Subject Object Predicate Lexical cue
T11739 39-43 Protein denotes Sox6
T11738 30-34 Protein denotes Sox5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T15794 14-26 Binding denotes dimerization
T15710 39-43 Protein denotes Sox6
T15709 30-34 Protein denotes Sox5
R11005 T15709 T15794 themeOf Sox5,dimerization
R11006 T15710 T15794 themeOf Sox6,dimerization

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13382 14-26 Binding denotes dimerization
T13300 39-43 Protein denotes Sox6
T13299 30-34 Protein denotes Sox5
R9171 T13300 T13382 themeOf Sox6,dimerization

DLUT931

Id Subject Object Predicate Lexical cue
T13632 70-78 Positive_regulation denotes increase
T13631 14-26 Binding denotes dimerization
T13546 39-43 Protein denotes Sox6
T13545 30-34 Protein denotes Sox5
R9271 T13545 T13631 themeOf Sox5,dimerization
R9273 T13546 T13631 themeOf Sox6,dimerization
R9316 T13631 T13632 themeOf dimerization,increase

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T15573 126-169 Entity denotes to DNA that contains adjacent Sox sites [6]
T15536 14-43 Entity denotes dimerization of Sox5 and Sox6
T15520 113-116 Protein denotes Sox
T15503 102-125 Protein denotes of the two Sox proteins
T15471 39-43 Protein denotes Sox6
T15441 147-169 Entity denotes adjacent Sox sites [6]
T15611 30-34 Protein denotes Sox5
T15602 156-159 Protein denotes Sox

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13951 169-170 . denotes .
T13950 168-169 NNP denotes ]
T13949 167-168 CD denotes 6
T13948 166-167 NNP denotes [
T13947 160-165 NNS denotes sites
T13946 156-159 NNP denotes Sox
T13945 147-155 JJ denotes adjacent
T13944 138-146 VBZ denotes contains
T13943 133-137 IN denotes that
T13942 129-132 NNP denotes DNA
T13941 126-128 TO denotes to
T13940 117-125 NNS denotes proteins
T13939 113-116 NNP denotes Sox
T13938 109-112 CD denotes two
T13937 105-108 DT denotes the
T13936 102-104 IN denotes of
T13935 91-101 NN denotes efficiency
T13934 83-90 JJ denotes binding
T13933 79-82 DT denotes the
T13932 70-78 VB denotes increase
T13931 62-69 RB denotes greatly
T13930 59-61 TO denotes to
T13929 53-58 VBN denotes shown
T13928 48-52 VBN denotes been
T13927 44-47 VBZ denotes has
T13926 39-43 NNP denotes Sox6
T13925 35-38 CC denotes and
T13924 30-34 NNS denotes Sox5
T13923 27-29 IN denotes of
T13922 14-26 NN denotes dimerization
T13921 12-13 , denotes ,
T13920 0-12 RB denotes Functionally
R9517 T13920 T13929 advmod Functionally,shown
R9518 T13921 T13929 punct ",",shown
R9520 T13922 T13929 nsubjpass dimerization,shown
R9521 T13923 T13922 prep of,dimerization
R9522 T13924 T13923 pobj Sox5,of
R9524 T13925 T13922 cc and,dimerization
R9525 T13926 T13922 conj Sox6,dimerization
R9526 T13927 T13929 aux has,shown
R9527 T13928 T13929 auxpass been,shown
R9529 T13929 T13929 ROOT shown,shown
R9530 T13930 T13932 aux to,increase
R9531 T13931 T13932 advmod greatly,increase
R9533 T13932 T13929 xcomp increase,shown
R9534 T13933 T13935 det the,efficiency
R9535 T13934 T13935 amod binding,efficiency
R9537 T13935 T13932 dobj efficiency,increase
R9539 T13936 T13935 prep of,efficiency
R9540 T13937 T13940 det the,proteins
R9541 T13938 T13940 nummod two,proteins
R9542 T13939 T13940 compound Sox,proteins
R9544 T13940 T13936 pobj proteins,of
R9545 T13941 T13932 prep to,increase
R9546 T13942 T13941 pobj DNA,to
R9548 T13943 T13944 nsubj that,contains
R9549 T13944 T13929 conj contains,shown
R9551 T13945 T13947 amod adjacent,sites
R9552 T13946 T13947 compound Sox,sites
R9553 T13947 T13944 dobj sites,contains
R9554 T13948 T13950 nmod [,]
R9556 T13949 T13950 nummod 6,]
R9557 T13950 T13947 appos ],sites
R9558 T13951 T13929 punct .,shown

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T11619 113-125 Protein denotes Sox proteins
T11618 39-43 Protein denotes Sox6
T11617 30-34 Protein denotes Sox5

testone

Id Subject Object Predicate Lexical cue
T10792 39-43 Protein denotes Sox6
T10791 30-34 Protein denotes Sox5
T10880 83-90 Binding denotes binding
T10879 70-78 Positive_regulation denotes increase
T10878 14-26 Binding denotes dimerization
R7439 T10791 T10878 themeOf Sox5,dimerization
R7440 T10792 T10878 themeOf Sox6,dimerization
R7483 T10878 T10879 causeOf dimerization,increase
R7484 T10880 T10879 themeOf binding,increase

test3

Id Subject Object Predicate Lexical cue
T11037 83-90 Binding denotes binding
T11036 70-78 Positive_regulation denotes increase
T11035 39-43 Protein denotes Sox6
T11034 30-34 Protein denotes Sox5
T10937 39-43 Protein denotes Sox6
T10936 30-34 Protein denotes Sox5
R7499 T11037 T11036 themeOf binding,increase