PMC:1359074 / 25660-25806 JSONTXT

{"project":"pmc-enju-pas","denotations":[{"id":"T11867","span":{"begin":141,"end":145},"obj":"NN"},{"id":"T11866","span":{"begin":134,"end":140},"obj":"NN"},{"id":"T11865","span":{"begin":131,"end":133},"obj":"JJ"},{"id":"T11864","span":{"begin":127,"end":130},"obj":"DT"},{"id":"T11863","span":{"begin":124,"end":126},"obj":"IN"},{"id":"T11862","span":{"begin":111,"end":123},"obj":"NN"},{"id":"T11861","span":{"begin":100,"end":110},"obj":"JJ"},{"id":"T11860","span":{"begin":98,"end":99},"obj":"DT"},{"id":"T11859","span":{"begin":94,"end":97},"obj":"CC"},{"id":"T11858","span":{"begin":92,"end":93},"obj":"-COMMA-"},{"id":"T11857","span":{"begin":89,"end":92},"obj":"NN"},{"id":"T11856","span":{"begin":85,"end":88},"obj":"CC"},{"id":"T11855","span":{"begin":83,"end":84},"obj":"NN"},{"id":"T11854","span":{"begin":81,"end":82},"obj":"-COMMA-"},{"id":"T11853","span":{"begin":76,"end":81},"obj":"NN"},{"id":"T11852","span":{"begin":69,"end":75},"obj":"NN"},{"id":"T11851","span":{"begin":59,"end":68},"obj":"JJ"},{"id":"T11850","span":{"begin":55,"end":58},"obj":"DT"},{"id":"T11849","span":{"begin":52,"end":54},"obj":"IN"},{"id":"T11848","span":{"begin":45,"end":51},"obj":"NN"},{"id":"T11847","span":{"begin":35,"end":44},"obj":"JJ"},{"id":"T11846","span":{"begin":33,"end":34},"obj":"DT"},{"id":"T11845","span":{"begin":30,"end":32},"obj":"VB"},{"id":"T11844","span":{"begin":24,"end":29},"obj":"EX"},{"id":"T11843","span":{"begin":22,"end":23},"obj":"-COMMA-"},{"id":"T11842","span":{"begin":17,"end":22},"obj":"NN"},{"id":"T11841","span":{"begin":12,"end":16},"obj":"JJ"},{"id":"T11840","span":{"begin":7,"end":11},"obj":"NN"},{"id":"T11839","span":{"begin":3,"end":6},"obj":"DT"},{"id":"T11838","span":{"begin":0,"end":2},"obj":"IN"}],"relations":[{"id":"R7710","pred":"arg2Of","subj":"T11842","obj":"T11838"},{"id":"R7711","pred":"arg1Of","subj":"T11842","obj":"T11839"},{"id":"R7712","pred":"arg1Of","subj":"T11842","obj":"T11840"},{"id":"R7713","pred":"arg1Of","subj":"T11842","obj":"T11841"},{"id":"R7714","pred":"arg1Of","subj":"T11844","obj":"T11845"},{"id":"R7715","pred":"arg1Of","subj":"T11845","obj":"T11838"},{"id":"R7716","pred":"arg1Of","subj":"T11845","obj":"T11843"},{"id":"R7717","pred":"arg2Of","subj":"T11848","obj":"T11845"},{"id":"R7718","pred":"arg1Of","subj":"T11848","obj":"T11846"},{"id":"R7719","pred":"arg1Of","subj":"T11848","obj":"T11847"},{"id":"R7720","pred":"arg1Of","subj":"T11848","obj":"T11849"},{"id":"R7721","pred":"arg1Of","subj":"T11853","obj":"T11850"},{"id":"R7722","pred":"arg1Of","subj":"T11853","obj":"T11851"},{"id":"R7723","pred":"arg1Of","subj":"T11853","obj":"T11852"},{"id":"R7724","pred":"arg1Of","subj":"T11853","obj":"T11854"},{"id":"R7725","pred":"arg1Of","subj":"T11853","obj":"T11859"},{"id":"R7726","pred":"arg1Of","subj":"T11855","obj":"T11856"},{"id":"R7727","pred":"arg2Of","subj":"T11856","obj":"T11854"},{"id":"R7728","pred":"arg2Of","subj":"T11857","obj":"T11856"},{"id":"R7729","pred":"arg2Of","subj":"T11859","obj":"T11849"},{"id":"R7730","pred":"arg1Of","subj":"T11859","obj":"T11858"},{"id":"R7731","pred":"arg2Of","subj":"T11862","obj":"T11859"},{"id":"R7732","pred":"arg1Of","subj":"T11862","obj":"T11860"},{"id":"R7733","pred":"arg1Of","subj":"T11862","obj":"T11861"},{"id":"R7734","pred":"arg1Of","subj":"T11862","obj":"T11863"},{"id":"R7735","pred":"arg2Of","subj":"T11867","obj":"T11863"},{"id":"R7736","pred":"arg1Of","subj":"T11867","obj":"T11864"},{"id":"R7737","pred":"arg1Of","subj":"T11867","obj":"T11865"},{"id":"R7738","pred":"arg1Of","subj":"T11867","obj":"T11866"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T11445","span":{"begin":89,"end":92},"obj":"Antecedent"},{"id":"T11444","span":{"begin":83,"end":84},"obj":"Antecedent"},{"id":"T11443","span":{"begin":59,"end":81},"obj":"Anaphor"}],"relations":[{"id":"R7667","pred":"boundBy","subj":"T11443","obj":"T11444"},{"id":"R7668","pred":"boundBy","subj":"T11443","obj":"T11445"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T11465","span":{"begin":131,"end":140},"obj":"Protein"},{"id":"T11464","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T11463","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T11462","span":{"begin":7,"end":11},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T13250","span":{"begin":7,"end":11},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"GO-BP","denotations":[{"id":"T11206","span":{"begin":134,"end":140},"obj":"http://purl.obolibrary.org/obo/GO_0005344"},{"id":"T11205","span":{"begin":69,"end":75},"obj":"http://purl.obolibrary.org/obo/GO_0005344"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"GO-MF","denotations":[{"id":"T11556","span":{"begin":134,"end":140},"obj":"http://purl.obolibrary.org/obo/GO_0005344"},{"id":"T11555","span":{"begin":69,"end":75},"obj":"http://purl.obolibrary.org/obo/GO_0005344"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"sentences","denotations":[{"id":"T11150","span":{"begin":0,"end":146},"obj":"Sentence"},{"id":"T199","span":{"begin":0,"end":146},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"simple1","denotations":[{"id":"T11729","span":{"begin":131,"end":140},"obj":"Protein"},{"id":"T11728","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T11727","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T11726","span":{"begin":7,"end":11},"obj":"Protein"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"BioNLP16_DUT","denotations":[{"id":"T15790","span":{"begin":111,"end":123},"obj":"Positive_regulation"},{"id":"T15789","span":{"begin":45,"end":51},"obj":"Regulation"},{"id":"T15700","span":{"begin":131,"end":140},"obj":"Protein"},{"id":"T15699","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T15698","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T15697","span":{"begin":7,"end":11},"obj":"Protein"}],"relations":[{"id":"R10997","pred":"themeOf","subj":"T15698","obj":"T15789"},{"id":"R10998","pred":"themeOf","subj":"T15699","obj":"T15789"},{"id":"R10999","pred":"themeOf","subj":"T15700","obj":"T15790"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"BioNLP16_Messiy","denotations":[{"id":"T13379","span":{"begin":111,"end":123},"obj":"Positive_regulation"},{"id":"T13290","span":{"begin":131,"end":140},"obj":"Protein"},{"id":"T13289","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T13288","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T13287","span":{"begin":7,"end":11},"obj":"Protein"}],"relations":[{"id":"R9161","pred":"themeOf","subj":"T13290","obj":"T13379"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"DLUT931","denotations":[{"id":"T13627","span":{"begin":111,"end":123},"obj":"Positive_regulation"},{"id":"T13626","span":{"begin":45,"end":51},"obj":"Regulation"},{"id":"T13625","span":{"begin":12,"end":16},"obj":"Negative_regulation"},{"id":"T13536","span":{"begin":131,"end":140},"obj":"Protein"},{"id":"T13535","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T13534","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T13533","span":{"begin":7,"end":11},"obj":"Protein"}],"relations":[{"id":"R9241","pred":"themeOf","subj":"T13533","obj":"T13625"},{"id":"R9248","pred":"themeOf","subj":"T13534","obj":"T13626"},{"id":"R9249","pred":"themeOf","subj":"T13535","obj":"T13626"},{"id":"R9254","pred":"themeOf","subj":"T13536","obj":"T13627"},{"id":"R9311","pred":"themeOf","subj":"T13627","obj":"T13626"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T15695","span":{"begin":98,"end":145},"obj":"Positive_regulation"},{"id":"T15601","span":{"begin":124,"end":145},"obj":"Protein"},{"id":"T15575","span":{"begin":7,"end":11},"obj":"Protein"},{"id":"T15550","span":{"begin":55,"end":81},"obj":"Protein"},{"id":"T15522","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T15492","span":{"begin":55,"end":81},"obj":"Protein"},{"id":"T15490","span":{"begin":89,"end":93},"obj":"Protein"},{"id":"T15457","span":{"begin":134,"end":140},"obj":"Protein"},{"id":"T15439","span":{"begin":59,"end":68},"obj":"Protein"},{"id":"T15664","span":{"begin":124,"end":145},"obj":"Protein"}],"relations":[{"id":"R10989","pred":"themeOf","subj":"T15601","obj":"T15695"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T13854","span":{"begin":145,"end":146},"obj":"."},{"id":"T13853","span":{"begin":141,"end":145},"obj":"NN"},{"id":"T13852","span":{"begin":134,"end":140},"obj":"NN"},{"id":"T13851","span":{"begin":131,"end":133},"obj":"JJ"},{"id":"T13850","span":{"begin":127,"end":130},"obj":"DT"},{"id":"T13849","span":{"begin":124,"end":126},"obj":"IN"},{"id":"T13848","span":{"begin":111,"end":123},"obj":"NN"},{"id":"T13847","span":{"begin":100,"end":110},"obj":"JJ"},{"id":"T13846","span":{"begin":98,"end":99},"obj":"DT"},{"id":"T13845","span":{"begin":94,"end":97},"obj":"CC"},{"id":"T13844","span":{"begin":92,"end":93},"obj":","},{"id":"T13843","span":{"begin":89,"end":92},"obj":"NNP"},{"id":"T13842","span":{"begin":85,"end":88},"obj":"CC"},{"id":"T13841","span":{"begin":83,"end":84},"obj":"NN"},{"id":"T13840","span":{"begin":81,"end":82},"obj":","},{"id":"T13839","span":{"begin":76,"end":81},"obj":"NNS"},{"id":"T13838","span":{"begin":69,"end":75},"obj":"NN"},{"id":"T13837","span":{"begin":59,"end":68},"obj":"JJ"},{"id":"T13836","span":{"begin":55,"end":58},"obj":"DT"},{"id":"T13835","span":{"begin":52,"end":54},"obj":"IN"},{"id":"T13834","span":{"begin":45,"end":51},"obj":"NN"},{"id":"T13833","span":{"begin":35,"end":44},"obj":"JJ"},{"id":"T13832","span":{"begin":33,"end":34},"obj":"DT"},{"id":"T13831","span":{"begin":30,"end":32},"obj":"VBZ"},{"id":"T13830","span":{"begin":24,"end":29},"obj":"EX"},{"id":"T13829","span":{"begin":22,"end":23},"obj":","},{"id":"T13828","span":{"begin":17,"end":22},"obj":"NN"},{"id":"T13827","span":{"begin":12,"end":16},"obj":"NN"},{"id":"T13826","span":{"begin":7,"end":11},"obj":"NNP"},{"id":"T13825","span":{"begin":3,"end":6},"obj":"DT"},{"id":"T13824","span":{"begin":0,"end":2},"obj":"IN"}],"relations":[{"id":"R9425","pred":"prep","subj":"T13824","obj":"T13831"},{"id":"R9426","pred":"det","subj":"T13825","obj":"T13828"},{"id":"R9428","pred":"compound","subj":"T13826","obj":"T13828"},{"id":"R9429","pred":"amod","subj":"T13827","obj":"T13828"},{"id":"R9430","pred":"pobj","subj":"T13828","obj":"T13824"},{"id":"R9431","pred":"punct","subj":"T13829","obj":"T13831"},{"id":"R9433","pred":"expl","subj":"T13830","obj":"T13831"},{"id":"R9434","pred":"ROOT","subj":"T13831","obj":"T13831"},{"id":"R9436","pred":"det","subj":"T13832","obj":"T13834"},{"id":"R9438","pred":"amod","subj":"T13833","obj":"T13834"},{"id":"R9439","pred":"attr","subj":"T13834","obj":"T13831"},{"id":"R9441","pred":"det","subj":"T13846","obj":"T13848"},{"id":"R9442","pred":"prep","subj":"T13835","obj":"T13834"},{"id":"R9443","pred":"det","subj":"T13836","obj":"T13839"},{"id":"R9444","pred":"amod","subj":"T13837","obj":"T13839"},{"id":"R9445","pred":"compound","subj":"T13838","obj":"T13839"},{"id":"R9446","pred":"pobj","subj":"T13839","obj":"T13835"},{"id":"R9447","pred":"punct","subj":"T13840","obj":"T13839"},{"id":"R9448","pred":"conj","subj":"T13841","obj":"T13839"},{"id":"R9449","pred":"cc","subj":"T13842","obj":"T13841"},{"id":"R9450","pred":"conj","subj":"T13843","obj":"T13841"},{"id":"R9451","pred":"punct","subj":"T13844","obj":"T13843"},{"id":"R9452","pred":"cc","subj":"T13845","obj":"T13843"},{"id":"R9453","pred":"amod","subj":"T13847","obj":"T13848"},{"id":"R9454","pred":"conj","subj":"T13848","obj":"T13843"},{"id":"R9455","pred":"prep","subj":"T13849","obj":"T13848"},{"id":"R9456","pred":"det","subj":"T13850","obj":"T13853"},{"id":"R9458","pred":"amod","subj":"T13851","obj":"T13853"},{"id":"R9461","pred":"compound","subj":"T13852","obj":"T13853"},{"id":"R9465","pred":"pobj","subj":"T13853","obj":"T13849"},{"id":"R9468","pred":"punct","subj":"T13854","obj":"T13831"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T11607","span":{"begin":45,"end":51},"obj":"Regulation"},{"id":"T11606","span":{"begin":111,"end":123},"obj":"Positive_regulation"},{"id":"T11605","span":{"begin":131,"end":145},"obj":"Protein"},{"id":"T11604","span":{"begin":69,"end":81},"obj":"Protein"},{"id":"T11603","span":{"begin":7,"end":11},"obj":"Protein"}],"relations":[{"id":"R7680","pred":"causeOf","subj":"T11604","obj":"T11607"},{"id":"R7681","pred":"themeOf","subj":"T11605","obj":"T11606"},{"id":"R7682","pred":"themeOf","subj":"T11606","obj":"T11607"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"testone","denotations":[{"id":"T10782","span":{"begin":131,"end":140},"obj":"Protein"},{"id":"T10781","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T10780","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T10779","span":{"begin":7,"end":11},"obj":"Protein"},{"id":"T10872","span":{"begin":111,"end":123},"obj":"Positive_regulation"},{"id":"T10871","span":{"begin":45,"end":51},"obj":"Regulation"}],"relations":[{"id":"R7434","pred":"themeOf","subj":"T10782","obj":"T10872"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}

{"project":"test3","denotations":[{"id":"T11021","span":{"begin":131,"end":140},"obj":"Protein"},{"id":"T11020","span":{"begin":111,"end":123},"obj":"Positive_regulation"},{"id":"T11019","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T11018","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T11017","span":{"begin":7,"end":11},"obj":"Protein"},{"id":"T10927","span":{"begin":131,"end":140},"obj":"Protein"},{"id":"T10926","span":{"begin":89,"end":92},"obj":"Protein"},{"id":"T10925","span":{"begin":83,"end":84},"obj":"Protein"},{"id":"T10924","span":{"begin":7,"end":11},"obj":"Protein"}],"relations":[{"id":"R7492","pred":"themeOf","subj":"T11021","obj":"T11020"}],"text":"In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene."}